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  1. Software-old‏‎ (3,032 revisions)
  2. Training‏‎ (1,314 revisions)
  3. Software2‏‎ (860 revisions)
  4. Georgia Advanced Computing Resource Center‏‎ (320 revisions)
  5. Running Jobs on Sapelo2‏‎ (194 revisions)
  6. Software‏‎ (184 revisions)
  7. Installing Applications on Sapelo2‏‎ (123 revisions)
  8. Systems‏‎ (117 revisions)
  9. Available Toolchains and Toolchain Compatibility‏‎ (103 revisions)
  10. CryoSPARC-Sapelo2‏‎ (93 revisions)
  11. Globus‏‎ (83 revisions)
  12. Code Compilation on Sapelo2‏‎ (82 revisions)
  13. Disk Storage‏‎ (73 revisions)
  14. MATLAB-Sapelo2‏‎ (68 revisions)
  15. Bioinformatics Databases‏‎ (63 revisions)
  16. Globus Connect Personal‏‎ (60 revisions)
  17. Frequently Asked Questions‏‎ (59 revisions)
  18. Consulting‏‎ (58 revisions)
  19. Dropbox‏‎ (57 revisions)
  20. MPI‏‎ (54 revisions)
  21. Connecting‏‎ (53 revisions)
  22. Xcluster Go-Live‏‎ (52 revisions)
  23. OnDemand‏‎ (52 revisions)
  24. AlphaFold-Sapelo2‏‎ (50 revisions)
  25. Trinity-Sapelo2‏‎ (46 revisions)
  26. Migrating from Torque to Slurm‏‎ (45 revisions)
  27. Running Jobs on the teaching cluster‏‎ (38 revisions)
  28. Sample Scripts‏‎ (36 revisions)
  29. Canu-Teaching‏‎ (36 revisions)
  30. Java-Teaching‏‎ (34 revisions)
  31. Rocky 8 Transition Guide‏‎ (34 revisions)
  32. Jupyter-Sapelo2‏‎ (34 revisions)
  33. YH-T-Template‏‎ (34 revisions)
  34. Software on Sapelo2‏‎ (32 revisions)
  35. Software on sapslurm tmp‏‎ (30 revisions)
  36. Python-Sapelo2‏‎ (29 revisions)
  37. Past Sessions in 2016‏‎ (27 revisions)
  38. GeneMarkES-Sapelo2‏‎ (26 revisions)
  39. Monitoring Jobs on Sapelo2‏‎ (26 revisions)
  40. Tmp‏‎ (25 revisions)
  41. Past Sessions in 2017‏‎ (24 revisions)
  42. SMRTLINK-Teaching‏‎ (24 revisions)
  43. Job Submission partitions on Sapelo2‏‎ (24 revisions)
  44. GROMACS-Sapelo2‏‎ (24 revisions)
  45. Gaussian Users‏‎ (23 revisions)
  46. Changes implemented during November 16-22, 2018 maintenance‏‎ (23 revisions)
  47. Running Jobs‏‎ (23 revisions)
  48. Past Sessions in 2018‏‎ (22 revisions)
  49. RAxML-Sapelo2‏‎ (22 revisions)
  50. Getting Help‏‎ (21 revisions)
  51. GPU Hardware‏‎ (21 revisions)
  52. Perl-Teaching‏‎ (20 revisions)
  53. Bowtie2-Teaching‏‎ (20 revisions)
  54. GPU‏‎ (20 revisions)
  55. BUSCO-Sapelo2‏‎ (19 revisions)
  56. VSCode‏‎ (19 revisions)
  57. Lmod‏‎ (18 revisions)
  58. MAFFT-Teaching‏‎ (18 revisions)
  59. Compilers‏‎ (18 revisions)
  60. BCFtools-Teaching‏‎ (18 revisions)
  61. Past Sessions in 2019‏‎ (17 revisions)
  62. Python-Teaching‏‎ (17 revisions)
  63. Policies‏‎ (17 revisions)
  64. Best Practices on Sapelo2‏‎ (16 revisions)
  65. Meraculous-Sapelo2‏‎ (16 revisions)
  66. OpenMP‏‎ (16 revisions)
  67. R-Sapelo2‏‎ (16 revisions)
  68. User Accounts‏‎ (16 revisions)
  69. Maker-Sapelo2‏‎ (16 revisions)
  70. SAMtools-Teaching‏‎ (16 revisions)
  71. Using a Conda environment in Jupyter‏‎ (15 revisions)
  72. Student Accounts‏‎ (15 revisions)
  73. Sapelo2 Frequently Asked Questions‏‎ (15 revisions)
  74. Equalogic Backup Drive‏‎ (14 revisions)
  75. OrthoMCL-Sapelo2‏‎ (14 revisions)
  76. Quick Reference Guide‏‎ (14 revisions)
  77. SRAToolKit-Sapelo2‏‎ (14 revisions)
  78. ICommands-Sapelo2‏‎ (14 revisions)
  79. Beast-Sapelo2‏‎ (14 revisions)
  80. Sample batch job submission scripts on Sapelo2‏‎ (14 revisions)
  81. YH-S2-Template‏‎ (14 revisions)
  82. Software Template‏‎ (13 revisions)
  83. Rosetta-Sapelo2‏‎ (13 revisions)
  84. Comments on Responses to Survey May 2023‏‎ (13 revisions)
  85. Jupyter-Teaching‏‎ (13 revisions)
  86. Transferring Files‏‎ (13 revisions)
  87. Sapelo2 changes after Oct.24 maintenance‏‎ (12 revisions)
  88. Instructional Accounts‏‎ (12 revisions)
  89. GATK-Teaching‏‎ (12 revisions)
  90. Cromwell-Sapelo2‏‎ (12 revisions)
  91. Flankophile-Sapelo2‏‎ (12 revisions)
  92. GET HOMOLOGUES-Teaching‏‎ (12 revisions)
  93. IGV-Teaching‏‎ (12 revisions)
  94. STAR-Teaching‏‎ (12 revisions)
  95. Monitoring Jobs on the teaching cluster‏‎ (12 revisions)
  96. Password‏‎ (12 revisions)
  97. Troubleshooting on Sapelo2‏‎ (11 revisions)
  98. Past Sessions in 2020‏‎ (11 revisions)
  99. Cytoscape-Teaching‏‎ (11 revisions)
  100. Freebayes-Teaching‏‎ (11 revisions)
  101. Command List‏‎ (11 revisions)
  102. Sample batch job submission scripts on the teaching cluster‏‎ (11 revisions)
  103. 3D DOCK‏‎ (10 revisions)
  104. BLAST Databases-Sapelo2‏‎ (10 revisions)
  105. GAUSSIAN03‏‎ (10 revisions)
  106. Singularity‏‎ (10 revisions)
  107. Installing Applications‏‎ (9 revisions)
  108. Troubleshooting‏‎ (9 revisions)
  109. OrthoFinder-Sapelo2‏‎ (9 revisions)
  110. GAUSSIAN94‏‎ (9 revisions)
  111. Ncbiblast‏‎ (9 revisions)
  112. Wiki‏‎ (9 revisions)
  113. ORCA-Sapelo2‏‎ (9 revisions)
  114. HPC Center Links‏‎ (9 revisions)
  115. The Sapelo2 Project‏‎ (8 revisions)
  116. GAMESS-pcluster‏‎ (8 revisions)
  117. NCBI Connection‏‎ (8 revisions)
  118. Bioinformatics Database‏‎ (8 revisions)
  119. QIIME2-Sapelo2‏‎ (8 revisions)
  120. Stacks-Teaching‏‎ (8 revisions)
  121. GAUSSIAN-Teaching‏‎ (8 revisions)
  122. Biopython-Teaching‏‎ (8 revisions)
  123. PAML-Teaching‏‎ (8 revisions)
  124. StringTie-Teaching‏‎ (8 revisions)
  125. Borg backup‏‎ (8 revisions)
  126. BWA-Teaching‏‎ (8 revisions)
  127. Data transfer‏‎ (8 revisions)
  128. Maple-pcluster‏‎ (8 revisions)
  129. IQ-Tree-Teaching‏‎ (8 revisions)
  130. Proovread-Teaching‏‎ (7 revisions)
  131. GaussView-Sapelo2‏‎ (7 revisions)
  132. Sapelo2 and Sapelo2 (old) comparison‏‎ (7 revisions)
  133. LAMMPS-Sapelo2‏‎ (7 revisions)
  134. CellRanger-ATAC-Sapelo2‏‎ (7 revisions)
  135. GAG-Teaching‏‎ (7 revisions)
  136. BioPerl-Teaching‏‎ (7 revisions)
  137. BLAST+-Teaching‏‎ (7 revisions)
  138. InterProScan-Sapelo2‏‎ (7 revisions)
  139. NCL-Teaching‏‎ (7 revisions)
  140. File System Purging‏‎ (7 revisions)
  141. QIIME2-Teaching‏‎ (7 revisions)
  142. SequenceTubeMap-Sapelo2‏‎ (7 revisions)
  143. Code Compilation on the teaching cluster‏‎ (7 revisions)
  144. Rstudio-Sapelo2‏‎ (7 revisions)
  145. Monitoring Jobs‏‎ (7 revisions)
  146. Wiki tools‏‎ (7 revisions)
  147. IMa‏‎ (7 revisions)
  148. Compute-18-12‏‎ (7 revisions)
  149. RAxML-Teaching‏‎ (7 revisions)
  150. Pass Sessions in 2021‏‎ (7 revisions)
  151. Portal‏‎ (7 revisions)
  152. Canu-Sapelo2‏‎ (7 revisions)
  153. Office Hours‏‎ (7 revisions)
  154. CategorySearch‏‎ (6 revisions)
  155. Ongoing issues‏‎ (6 revisions)
  156. BEST Bayesian‏‎ (6 revisions)
  157. Software installed on Rocky 8‏‎ (6 revisions)
  158. BLAST+-Sapelo2‏‎ (6 revisions)
  159. SNAP-Zoe-Teaching‏‎ (6 revisions)
  160. HpcGridRunner-Sapelo2‏‎ (6 revisions)
  161. AMBER-Sapelo2‏‎ (6 revisions)
  162. BionanoSolve-Sapelo2‏‎ (6 revisions)
  163. BUSCO-Teaching‏‎ (6 revisions)
  164. Magma-Sapelo2‏‎ (6 revisions)
  165. AMBER-pcluster‏‎ (6 revisions)
  166. JupyterLab-Teaching‏‎ (6 revisions)
  167. Inactive Users‏‎ (6 revisions)
  168. SAS‏‎ (5 revisions)
  169. Zcluster re-purpose‏‎ (5 revisions)
  170. GaussView-Teaching‏‎ (5 revisions)
  171. NAMD-pcluster‏‎ (5 revisions)
  172. Ont-Guppy-Sapelo2‏‎ (5 revisions)
  173. BLAST+-Sapelo2old‏‎ (5 revisions)
  174. Connecting to the Slurm test cluster‏‎ (5 revisions)
  175. BLAST-Teaching‏‎ (5 revisions)
  176. How to Install and Configure PuTTY‏‎ (5 revisions)
  177. NCBI Fasta-Sapelo2‏‎ (5 revisions)
  178. BWA‏‎ (5 revisions)
  179. MahPIC‏‎ (5 revisions)
  180. DBG2OLC-Teaching‏‎ (5 revisions)
  181. AUGUSTUS-Teaching‏‎ (5 revisions)
  182. Mahpic‏‎ (5 revisions)
  183. Structure-Teaching‏‎ (5 revisions)
  184. Picard-Teaching‏‎ (5 revisions)
  185. Array Jobs‏‎ (5 revisions)
  186. ORP-Sapelo2‏‎ (5 revisions)
  187. BEDTools-Teaching‏‎ (5 revisions)
  188. Velvet-Sapelo2‏‎ (4 revisions)
  189. Big-Memory-Node Management‏‎ (4 revisions)
  190. Trinity-Teaching‏‎ (4 revisions)
  191. MOTECC qmdcp pcluster‏‎ (4 revisions)
  192. Chimera-Teaching‏‎ (4 revisions)
  193. Visual Studio Code SSH‏‎ (4 revisions)
  194. Software on Teaching Cluster‏‎ (4 revisions)
  195. GeneMarkES-Teaching‏‎ (4 revisions)
  196. OrthoFinder-Teaching‏‎ (4 revisions)
  197. GAUSSIAN-Sapelo2‏‎ (4 revisions)
  198. Uniref-Sapelo2‏‎ (4 revisions)
  199. RevBayes-Teaching‏‎ (4 revisions)
  200. NETCDF-pcluster‏‎ (4 revisions)
  201. Globus-CLI‏‎ (4 revisions)
  202. Minutes from 12/03/2013‏‎ (4 revisions)
  203. Job Submission Partitions‏‎ (4 revisions)
  204. PfamDB-Sapelo2‏‎ (4 revisions)
  205. R-pcluster‏‎ (4 revisions)
  206. SnpEff-Teaching‏‎ (4 revisions)
  207. Pilon-Teaching‏‎ (4 revisions)
  208. Maker-Teaching‏‎ (4 revisions)
  209. Gromacs-Sapelo2old‏‎ (4 revisions)
  210. Basespace-cli-Sapelo2‏‎ (4 revisions)
  211. CUDA-Sapelo2‏‎ (4 revisions)
  212. Compute-18-20‏‎ (4 revisions)
  213. Best Practices‏‎ (4 revisions)
  214. GapFiller-Teaching‏‎ (4 revisions)
  215. Test-software-page‏‎ (3 revisions)
  216. EIGENSOFT-Teaching‏‎ (3 revisions)
  217. Racon-Sapelo2‏‎ (3 revisions)
  218. EMBOSS-Teaching‏‎ (3 revisions)
  219. Velvet-Teaching‏‎ (3 revisions)
  220. Racon-Teaching‏‎ (3 revisions)
  221. RepeatMasker-Teaching‏‎ (3 revisions)
  222. SOAPdenovo2-Teaching‏‎ (3 revisions)
  223. UBCG-Sapelo2‏‎ (3 revisions)
  224. RepeatModeler-Teaching‏‎ (3 revisions)
  225. SPAdes-Teaching‏‎ (3 revisions)
  226. MUMmer-Teaching‏‎ (3 revisions)
  227. RepeatScout-Teaching‏‎ (3 revisions)
  228. Cufflinks-Teaching‏‎ (3 revisions)
  229. AMBER-Teaching‏‎ (3 revisions)
  230. Stampy-Sapelo2old‏‎ (3 revisions)
  231. IBM XL C/C++‏‎ (3 revisions)
  232. Upcoming Maintenance - July 27-28, 2021‏‎ (3 revisions)
  233. Bismark-Teaching‏‎ (3 revisions)
  234. IBM XL Fortran‏‎ (3 revisions)
  235. R-Teaching‏‎ (3 revisions)
  236. DIAMOND-Teaching‏‎ (3 revisions)
  237. Structure-Sapelo2‏‎ (3 revisions)
  238. Phenix-Sapelo2‏‎ (3 revisions)
  239. PartitionFinder-Teaching‏‎ (3 revisions)
  240. Anvi'o-Sapelo2‏‎ (3 revisions)
  241. Compute-18-16‏‎ (3 revisions)
  242. TopHat-Teaching‏‎ (3 revisions)
  243. Sample batch job submission scripts on SapSlurm‏‎ (3 revisions)
  244. VCFtools-Teaching‏‎ (3 revisions)
  245. Artemis-Teaching‏‎ (3 revisions)
  246. HISAT2-Teaching‏‎ (3 revisions)
  247. Mothur-Sapelo2‏‎ (3 revisions)
  248. VMWare‏‎ (3 revisions)
  249. Mathematica License‏‎ (3 revisions)
  250. Medusa-Sapelo2‏‎ (3 revisions)
  251. Trimmomatic-Teaching‏‎ (3 revisions)
  252. Past Sessions in 2015‏‎ (3 revisions)
  253. Megam-Teaching‏‎ (2 revisions)
  254. Compute-18-8‏‎ (2 revisions)
  255. Pweave-Teaching‏‎ (2 revisions)
  256. SCluster‏‎ (2 revisions)
  257. Installing Applications Sapelo2‏‎ (2 revisions)
  258. Sapelo2 changes after Jan.25 maintenance‏‎ (2 revisions)
  259. Pynini-Teaching‏‎ (2 revisions)
  260. MOTECC qmdcp-Teaching‏‎ (2 revisions)
  261. Homer-Teaching‏‎ (2 revisions)
  262. Lustre1 archive‏‎ (2 revisions)
  263. Virtual Machines‏‎ (2 revisions)
  264. How to Install and Configure Cygwin‏‎ (2 revisions)
  265. WPS-Teaching‏‎ (2 revisions)
  266. SeqKit-Teaching‏‎ (2 revisions)
  267. WRF-Teaching‏‎ (2 revisions)
  268. Miniasm-Teaching‏‎ (2 revisions)
  269. Htgs-Sapelo2‏‎ (2 revisions)
  270. NCO-Teaching‏‎ (2 revisions)
  271. WRFDA-Teaching‏‎ (2 revisions)
  272. Past Training Sessions in 2015‏‎ (2 revisions)
  273. SignalIP-Sapelo2‏‎ (2 revisions)
  274. Storage‏‎ (2 revisions)
  275. GEM-Sapelo2‏‎ (2 revisions)
  276. NWCHEM-pcluster‏‎ (2 revisions)
  277. PASTA-Teaching‏‎ (2 revisions)
  278. Minutes from 12/10/2013‏‎ (2 revisions)
  279. Panasas‏‎ (2 revisions)
  280. New Project List‏‎ (2 revisions)
  281. DRAM-bio-Sapelo2‏‎ (2 revisions)
  282. User Password Page‏‎ (2 revisions)
  283. PartitionFinder2-Sapelo2‏‎ (2 revisions)
  284. System Administration‏‎ (2 revisions)
  285. RCC MySQL Server‏‎ (2 revisions)
  286. Cactus-Sapelo2‏‎ (2 revisions)
  287. Inactive Labs‏‎ (2 revisions)
  288. Xdot-Teaching‏‎ (2 revisions)
  289. RCC OpenNMS Server‏‎ (2 revisions)
  290. Software Installed on Sapelo2‏‎ (2 revisions)
  291. TaxDB-Sapelo2‏‎ (2 revisions)
  292. Best Practices on Sapelo‏‎ (2 revisions)
  293. Ms-Teaching‏‎ (2 revisions)
  294. Index.php‏‎ (2 revisions)
  295. Compute-18-4‏‎ (2 revisions)
  296. GACRC Hadoop Headnode‏‎ (2 revisions)
  297. RCC Wiki Server‏‎ (1 revision)
  298. Harvest-Teaching‏‎ (1 revision)
  299. MuTect-Teaching‏‎ (1 revision)
  300. GACRC Monitoring Server‏‎ (1 revision)
  301. Hg19-Sapelo2‏‎ (1 revision)
  302. MetaPhlAn4-Sapelo2‏‎ (1 revision)
  303. NAS‏‎ (1 revision)
  304. 00Template-sapelo2‏‎ (1 revision)
  305. BioPython-Sapelo2‏‎ (1 revision)
  306. Refseq-Sapelo2‏‎ (1 revision)
  307. Microscopy Storage‏‎ (1 revision)
  308. Sapelo2 extended maintenance - Slurm migration‏‎ (1 revision)
  309. EuPathDB renewal‏‎ (1 revision)
  310. Migrating from PBS to SLURM‏‎ (1 revision)
  311. Chromosomer-Teaching‏‎ (1 revision)
  312. Sapelo decommissioned‏‎ (1 revision)
  313. Exonerate-Teaching‏‎ (1 revision)
  314. AC:Agenda for 02/24/2015‏‎ (1 revision)
  315. MSG-Teaching‏‎ (1 revision)
  316. Ipyrad-Teaching‏‎ (1 revision)
  317. Uniprot-Sapelo2‏‎ (1 revision)
  318. Past Sessions in 2021‏‎ (1 revision)
  319. Code Compilation on pcluster‏‎ (1 revision)
  320. SRA-Toolkit‏‎ (1 revision)
  321. Overview‏‎ (1 revision)
  322. Minimap2-Teaching‏‎ (1 revision)
  323. Job Resource Tuning‏‎ (1 revision)
  324. Walts rule‏‎ (1 revision)
  325. SSPACE-STANDARD-Teaching‏‎ (1 revision)
  326. Upcoming Maintenance - November 16-22, 2018‏‎ (1 revision)
  327. Widget:Iframe‏‎ (1 revision)
  328. BWA-Sapelo‏‎ (1 revision)
  329. SSPACE-longread-Teaching‏‎ (1 revision)
  330. Smoke-Sapelo2‏‎ (1 revision)
  331. GACRCSupport‏‎ (1 revision)
  332. GGF Storage Needs‏‎ (1 revision)
  333. Globus Connect Server‏‎ (1 revision)
  334. GACRC Cluster MySQL Server‏‎ (1 revision)
  335. GLIMMER-Teaching‏‎ (1 revision)
  336. Bacteria NCBI-sapelo2‏‎ (1 revision)
  337. CCDC / CSD Users‏‎ (1 revision)
  338. OOD Apps: Files‏‎ (1 revision)
  339. GACRC Hadoop Compute Node 1‏‎ (1 revision)
  340. Wublast-Sapelo2‏‎ (1 revision)
  341. Gss-Sapelo2‏‎ (1 revision)
  342. DdRADseq‏‎ (1 revision)
  343. GACRC Hadoop Compute Node 2‏‎ (1 revision)
  344. Pong-Sapelo2‏‎ (1 revision)
  345. MatLab-Teaching‏‎ (1 revision)
  346. Running Jobs on pcluster‏‎ (1 revision)
  347. Kallisto-Teaching‏‎ (1 revision)
  348. GACRC Hadoop Compute Node 3‏‎ (1 revision)
  349. TMHMMGuide‏‎ (1 revision)
  350. MrBayes-Sapelo2‏‎ (1 revision)
  351. Compute-18-24‏‎ (1 revision)
  352. KmerGenie-Teaching‏‎ (1 revision)
  353. VMWare Data Recovery‏‎ (1 revision)
  354. Past Session in 2020‏‎ (1 revision)
  355. GACRC Hadoop Compute Node 4‏‎ (1 revision)
  356. Prokka-Teaching‏‎ (1 revision)
  357. RCC Webserver‏‎ (1 revision)
  358. HTSeq-Teaching‏‎ (1 revision)
  359. LADR-Teaching‏‎ (1 revision)
  360. DyNet-Teaching‏‎ (1 revision)
  361. Software Licenses‏‎ (1 revision)

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