NCBI Fasta-Sapelo2

As of April, 2024, the NCBI is discontinuing FASTA availability from the BLAST database; the ability to generate FASTA-formatted files from BLAST database files is retained via the blastdbcmd function of BLAST+. etc.

Each fasta is located at the directory with the name pattern of either /db/ncbi/fasta/MMDDYYYY (e.g., /db/ncbi/fasta/09192019) or /db/ncbi/fasta/YYYYMMDD (e.g., /db/ncbi/fasta/20220401, which incidentally, is the last fully deployed version we have).

The following databases are available:

nr
nt
pdbaa
swissprot

Data source: NCBI Fasta FTP

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