Difference between revisions of "Georgia Advanced Computing Resource Center"

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Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the GACRC webpage.  The GACRC online information resources include:
 
Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the GACRC webpage.  The GACRC online information resources include:
  
*[http://gacrc.uga.edu/ Web Site] – general overview
+
*[http://gacrc.uga.edu/ Web Site] – General overview
*[https://wiki.gacrc.uga.edu/ Wiki] – software docs and how-to’s - "You Are Here"
+
*[https://wiki.gacrc.uga.edu/ Wiki] – Software docs and how-to’s - "You Are Here"
 +
*[https://kaltura.uga.edu/channel/GACRC/176125031 Kaltura] – Linux and HPC training videos
 
<!-- *[https://blog.gacrc.uga.edu/ Blog] – announcements -->
 
<!-- *[https://blog.gacrc.uga.edu/ Blog] – announcements -->
 
<!-- *[https://forums.gacrc.uga.edu/ Forums] – user discussion area -->
 
<!-- *[https://forums.gacrc.uga.edu/ Forums] – user discussion area -->
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<div style="width=100%; margin:0; background:#00CC33; font-size:120%; font-weight:bold; border:1px solid #00CC33; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Online </span></div>
 
<div style="width=100%; margin:0; background:#00CC33; font-size:120%; font-weight:bold; border:1px solid #00CC33; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Online </span></div>
  
 +
<!--
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<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Sapelo2 under maintenance, teaching cluster available </span></div>
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-->
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<!--
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<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Teaching cluster inaccessible while the scheduled UGA network maintenance is on-going</span></div>
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-->
 +
 +
<!--
 +
<div style="width=100%; margin:0; background:#00CC33; font-size:120%; font-weight:bold; border:1px solid #00CC33; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Sapelo2 Cluster Online </span></div>
 +
 +
<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Sapelo decommissioned</span></div>
 +
-->
  
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> IMPORTANT NEWS </div>
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> IMPORTANT NEWS </div>
The following is an important notice for all of our current zcluster users.
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The following is an important notice for all of our current users:
* [[zcluster Decommissioning]]
 
  
 +
* GACRC offering in-person drop-in '''[[Office Hours]]'''.
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 +
<blockquote style="background-color: lightyellow; border: solid thin grey;">
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'''May Office Hours:'''
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*'''Wednesday May 8th, 3:00-4:30 pm''' at the McBay Science library, Main floor
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*'''Monday May 13th, 10:00 am-12:00 pm''' at the Physics Building in room 315
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*'''Wednesday May 22nd, 3:00-4:30 pm''' at the McBay Science library, Main floor
 +
</blockquote>
  
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Getting Started </div>
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Getting Started </div>
 
Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources.
 
Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources.
* [[User Accounts]]
+
*[[User Accounts]]
* [[Connecting]]
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*[[Instructional Accounts]]
* [[Transferring Files]]
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*[[Connecting]]
* [[Password | Changing your Password]]
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*[[Transferring Files]]
* [[Frequently Asked Questions]]
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*[[Password | Changing your Password]]
* [[Command List]]
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*[[Frequently Asked Questions | FAQ]]
* [[Getting Help]]
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*[https://wiki.gacrc.uga.edu/wiki/Quick_Reference_Guide Command List]
* [[Policies]]
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*[[Getting Help]]
* [[Consulting]]
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*[[Policies]]
* [[Training]]
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*[[Consulting]]
 +
*[[Training]]
  
  
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Services </div>
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<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> System Information </div>
Services and other resources.
+
Hardware information and operational procedures are described below.
* [[Instructional Accounts]]
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*[[Systems]]
 +
*[[Disk Storage]]
 +
<!-- * [[Sapelo2 and Sapelo2 (old) comparison]] -->
  
  
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> System Information </div>
+
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Job and Data Management </div>
Hardware information and operational procedures are described below.
+
Information on how to run jobs and data management.
* [[Systems]]
+
*[[Running Jobs]]
* [[Disk Storage]]
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*[[Monitoring Jobs]]
* [[Running Jobs]]
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*[[Job Submission Partitions]]
* [[Monitoring Jobs]]
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*[[Sample Scripts | Sample Job Submission Scripts]]
* [[Job Submission Queues]]
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*[[Migrating from Torque to Slurm]]
* [[Sample Scripts | Sample Job Scripts]]
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*[[Troubleshooting on Sapelo2]]
* [[Build Applications]]
+
*[[Best Practices]]
 +
*[[Globus]]
 +
*[[OnDemand | Open OnDemand]]
  
  
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Software and Libraries </div>
 
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Software and Libraries </div>
 
Documentation for software applications, programming tools, and usage.
 
Documentation for software applications, programming tools, and usage.
* [[Software]]
+
*[[Software]]
* [[Bioinformatics Databases]]
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*[[Available Toolchains and Toolchain Compatibility]]
* [[OpenMP]]
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*[[Bioinformatics Databases]]
* [[MPI | Message Passing Interface (MPI)]]
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*[[OpenMP]]
* [[Compilers]]
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*[[MPI | Message Passing Interface (MPI)]]
* [[GPU|GPU and CUDA Programming]]
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*[[Compilers]]
* [[Galaxy]]
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*[[GPU|GPU and CUDA Programming]]
 +
*[[Installing Applications]]
  
  
 +
<!--
 +
* [[Galaxy]]
 +
* [[Zaney]]
  
 
<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;">
 
<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;">
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<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;">
 
<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;">
 
[[GACRC Advisory Committee]]</div>
 
[[GACRC Advisory Committee]]</div>
 +
-->

Latest revision as of 15:18, 24 April 2024

Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the GACRC webpage. The GACRC online information resources include:

  • Web Site – General overview
  • Wiki – Software docs and how-to’s - "You Are Here"
  • Kaltura – Linux and HPC training videos


Current Status: Online


IMPORTANT NEWS

The following is an important notice for all of our current users:

May Office Hours:

  • Wednesday May 8th, 3:00-4:30 pm at the McBay Science library, Main floor
  • Monday May 13th, 10:00 am-12:00 pm at the Physics Building in room 315
  • Wednesday May 22nd, 3:00-4:30 pm at the McBay Science library, Main floor
Getting Started

Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources.


System Information

Hardware information and operational procedures are described below.


Job and Data Management

Information on how to run jobs and data management.


Software and Libraries

Documentation for software applications, programming tools, and usage.