Georgia Advanced Computing Resource Center: Difference between revisions
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Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the [http:// | Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the GACRC webpage. The GACRC online information resources include: | ||
*[http://gacrc.uga.edu/ Web Site] – General overview | |||
*[https://wiki.gacrc.uga.edu/ Wiki] – Software docs and how-to’s - "You Are Here" | |||
*[https://kaltura.uga.edu/channel/GACRC/176125031 Kaltura] – Linux and HPC training videos | |||
<!-- *[https://blog.gacrc.uga.edu/ Blog] – announcements --> | |||
<!-- *[https://forums.gacrc.uga.edu/ Forums] – user discussion area --> | |||
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<!-- default text, at end of line, is: Online --> | |||
<div style="width=100%; margin:0; background:#00CC33; font-size:120%; font-weight:bold; border:1px solid #00CC33; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Online </span></div> | |||
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<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Scheduled maintenance underway - Sapelo2, xfer nodes, GACRC storage systems, and Open OnDemand unavailable </span></div> | |||
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<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Teaching cluster inaccessible while the scheduled UGA network maintenance is on-going</span></div> | |||
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<div style="width=100%; margin:0; background:#00CC33; font-size:120%; font-weight:bold; border:1px solid #00CC33; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Sapelo2 Cluster Online </span></div> | |||
<div style="width=100%; margin:0; background:#FF9F40; font-size:120%; font-weight:bold; border:1px solid #FF9F40; text-align:left; color:white; padding:0.2em 0.4em;"> Current Status: <span style="color:black"> Sapelo decommissioned</span></div> | |||
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<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> IMPORTANT NEWS </div> | |||
The following is an important notice for all of our current users: | |||
* GACRC offering in-person drop-in '''[[Office Hours]]'''. | |||
<blockquote style="background-color: lightyellow; border: solid thin grey;"> | |||
'''October Office Hours:''' | |||
*'''Wednesday October 9th, 3:00-4:30 pm''' at the McBay Science library, Main floor | |||
</blockquote> | |||
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Getting Started </div> | <div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Getting Started </div> | ||
Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources. | Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources. | ||
* [[Connecting]] | *[[User Accounts]] | ||
* [[Transferring Files]] | *[[Instructional Accounts]] | ||
* [[Password | Changing your Password]] | *[[Connecting]] | ||
* [[Frequently Asked Questions]] | *[[Transferring Files]] | ||
* [ | *[[Password | Changing your Password]] | ||
* [[Getting Help]] | *[[Frequently Asked Questions | FAQ]] | ||
* [[Policies]] | *[https://wiki.gacrc.uga.edu/wiki/Quick_Reference_Guide Command List] | ||
* [[Consulting]] | *[[Getting Help]] | ||
*[[Policies]] | |||
*[[Consulting]] | |||
*[[Training]] | |||
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> System Information </div> | <div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> System Information </div> | ||
Hardware information and operational procedures are described below. | Hardware information and operational procedures are described below. | ||
* [[Systems]] | *[[Systems]] | ||
* [[Running Jobs]] | *[[Disk Storage]] | ||
* [[ | <!-- * [[Sapelo2 and Sapelo2 (old) comparison]] --> | ||
* [[Job Submission | |||
* [[Sample Scripts | Sample Job Scripts]] | |||
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Job and Data Management </div> | |||
Information on how to run jobs and data management. | |||
*[[Running Jobs]] | |||
*[[Monitoring Jobs]] | |||
*[[Job Submission Partitions]] | |||
*[[Sample Scripts | Sample Job Submission Scripts]] | |||
*[[Migrating from Torque to Slurm]] | |||
*[[Troubleshooting on Sapelo2]] | |||
*[[Best Practices]] | |||
*[[Globus]] | |||
*[[OnDemand | Open OnDemand]] | |||
<div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Software and Libraries </div> | <div style="width=100%; margin:0; background:#333333; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee; padding:0.2em 0.4em;"> Software and Libraries </div> | ||
Documentation for software applications, programming tools, and usage | Documentation for software applications, programming tools, and usage. | ||
* [[Software]] | *[[Software]] | ||
* [[Bioinformatics | *[[Available Toolchains and Toolchain Compatibility]] | ||
*[[Bioinformatics Databases]] | |||
*[[OpenMP]] | |||
*[[MPI | Message Passing Interface (MPI)]] | |||
*[[Compilers]] | |||
*[[GPU|GPU and CUDA Programming]] | |||
*[[Installing Applications]] | |||
<!-- | |||
* [[Galaxy]] | * [[Galaxy]] | ||
* [[ | * [[Zaney]] | ||
<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;"> | <div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;"> | ||
[[GACRC Knowledge Base]]</div> | [[GACRC Knowledge Base]]</div> | ||
<br /> | |||
<div style="width=100%; margin:0; background:#eeeeee; font-size:120%; font-weight:bold; border:1px solid #f9f9f9; text-align:left; color:#eeeeee padding:0.2em 0.4em;"> | |||
[[GACRC Advisory Committee]]</div> | |||
--> | |||
Latest revision as of 12:55, 3 October 2024
Welcome to the Georgia Advanced Computing Resource Center wiki. The information provided here is a supplement to the GACRC webpage. The GACRC online information resources include:
- Web Site – General overview
- Wiki – Software docs and how-to’s - "You Are Here"
- Kaltura – Linux and HPC training videos
Current Status: Online
IMPORTANT NEWS
The following is an important notice for all of our current users:
- GACRC offering in-person drop-in Office Hours.
October Office Hours:
- Wednesday October 9th, 3:00-4:30 pm at the McBay Science library, Main floor
Getting Started
Welcome to the Georgia Advanced Computing Resource Center at the University of Georgia. If you're new to the GACRC, start with these links to get acquainted with our resources.
- User Accounts
- Instructional Accounts
- Connecting
- Transferring Files
- Changing your Password
- FAQ
- Command List
- Getting Help
- Policies
- Consulting
- Training
System Information
Hardware information and operational procedures are described below.
Job and Data Management
Information on how to run jobs and data management.
- Running Jobs
- Monitoring Jobs
- Job Submission Partitions
- Sample Job Submission Scripts
- Migrating from Torque to Slurm
- Troubleshooting on Sapelo2
- Best Practices
- Globus
- Open OnDemand
Software and Libraries
Documentation for software applications, programming tools, and usage.
- Software
- Available Toolchains and Toolchain Compatibility
- Bioinformatics Databases
- OpenMP
- Message Passing Interface (MPI)
- Compilers
- GPU and CUDA Programming
- Installing Applications