Training
Training Sessions
The GACRC regularly hosts training sessions on a number of subjects relevant to the use of our computational and storage resources. Scheduled trainings will be announced through the GACRC mailing list.
NOTE: New users are required to attend an introductory training session and information about that will be sent once an account is requested.
Event Announcement
The GACRC is going to host six training workshops in January 2016 at Life Sciences Building, room C128. The six workshops will provide an introduction to the GACRC Linux high performance computing (HPC) clusters and the Linux basics. We also offer a Linux practice session for GACRC users to obtain Linux hands-on working experiences.
| Title | Date/Time | Location |
|---|---|---|
| Introduction to HPC Using the New Cluster at GACRC | January 6th, 2016, Wednesday, 3:00 PM - 4:30 PM | Davison Life Sciences Complex C128 |
| Introduction to HPC Using zcluster at GACRC | January 11th, 2016, Monday, 10:00 AM - 11:30 AM | Davison Life Sciences Complex C128 |
| Introduction to Linux Basics Part-I | January 13th, 2016, Wednesday, 3:00 PM - 4:30 PM | Davison Life Sciences Complex C128 |
| Linux Hands-on Practice Session (Basic Linux knowledge required) | January 20th, 2016, Wednesday, 3:00 PM - 4:30 PM | Davison Life Sciences Complex C128 |
| Introduction to HPC Using the New Cluster at GACRC | January 25th, 2016, Monday, 10:00 AM - 11:30 AM | Davison Life Sciences Complex C128 |
| Introduction to HPC Using zcluster at GACRC | January 27th, 2016, Wednesday, 3:00 PM - 4:30 PM | Davison Life Sciences Complex C128 |
Who Should Attend: New HPC cluster and zcluster users, or researchers who are interested in learning about the GACRC computing resources and Linux basics (Linux OS, Linux filesystem, shell, and common commands, scripting, etc.).
Topic Introduction
Title: Introduction to HPC Using the New Cluster at GACRC
Focus:
What's the new cluster at GACRC
New cluster's current computing resources
New cluster software environment
How to operate with the new cluster
How to work with the new cluster, e.g., how to run interactive jobs; how to run batch jobs; how to make job submission scripts and request computing resources; how to check job status, etc.
Title: Introduction to HPC Using zcluster at GACRC
Focus:
What's zcluster at GACRC
zcluster current computing resources
zcluster software environment
How to work with zcluster, e.g., how to run interactive jobs; how to run batch jobs and request computing resources; how to make job submission scripts; how to check job status, etc.
Title: Introduction to Linux Basics Part-I
Focus:
Linux OS and brief history
Linux command, filesystem, and shell
Linux common commands, etc.
Title: Linux Hands-on Practice Session (Basic Linux knowledge required)
Focus:
Hands-on practice on Linux common commands and shell scripting with common Linux utilities, e.g., sort, find, grep, awk, and sed etc.
How to Register
If you would like to attend, please respond by email to: zhuofei@uga.edu or pakala@uga.edu. Also please tell us which session you want to attend.
We have 25 seats in the lab room, so we have a 25 user/workshop limit. Please respond at your earliest convenience to register to guarantee your seat. You are welcome and encouraged to attend those workshops to learn about how to work with the HPC clusters at the GACRC.
The GACRC is going to host other training workshops and seminars covering various HPC topics, including HPC introduction, Linux working environment and utilities (Linux Part III), Bioinfomatics applications, scientific programming, etc., in the near future. We will announce those events when they are scheduled.
The GACRC Web Training page can be found at http://gacrc.uga.edu/help/training/ and the GACRC Wiki Training page can be found at https://wiki.gacrc.uga.edu/wiki/Training, from which you can find detailed information about upcoming and past training sessions from GACRC and download training materials.
Download
GACRC Computing Resources
Linux Basics
| media: Introduction to Linux Basics Part-I Workshop20160113 v3.pdf |
| media: Introduction to Linux Basics Part-II Workshop20151130 v2.pdf |
BioInfo Application on GACRC Computing Resources
Out-Reach/On-Class Talk
| Dept./Center/Institute | Type | Workshop PDF |
|---|---|---|
| The Institute of Bioinformatics and the Quantitative Biology Consulting Group | Out-Reach | media: Introduction to HPC Resources at GACRC BBB Talk 20151014.pdf |
| The Center for Simulational Physics | Out-Reach | media: Introduction to HPC Using the New Cluster at GACRC Workshop CSP20150915 v2.pdf |
| Microbiology | On-Class MIBO8150 | media: Introduction to HPC Resources at GACRC MIBO8150 20151007.pdf |
| Statistics | On-Class STAT8060 | media: Introduction to HPC Using zcluster at GACRC Workshop STAT8060 20150826.pdf |
| Biochemistry and Molecular Biology | On-Class BCMB8211 | media: Introduction to HPC Using zcluster at GACRC BCMB8211 20160114.pdf |
NOTE: The slides may become outdated and you should always check GACRC Wiki for up to date information.