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Combined display of all available logs of Research Computing Center Wiki. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

• 08:38, 13 August 2024 Moses talk contribs uploaded File:GACRC-Teaching-cluster-new-user-training-workshop Fall2024.pdf
• 14:27, 30 July 2024 Chelsea talk contribs created page Trinity-HpcGridRunner (Created page with " ===Description=== Instruction on how to modify a Trinity script to run in conjunction with HpcGridRunner ===Running Program=== Step 1: Create normal Trinity script * Note: normal Trinity jobs should be run utilizing /lscratch, however, this method running with HpcGridRunner does not benefit from /lscratch so this example will not have any /lscratch components in it. For more information on running normal Trinity jobs with /lscratch, please see Trinity-Sapelo2#Utilizi...") Tag: Visual edit
• 09:35, 3 July 2024 Kstanier talk contribs created page LLM Training (Added initial training workflow details) Tag: Visual edit
• 10:39, 1 July 2024 Jordan talk contribs created page RAxML-NG-Sapelo2 (Created page with "Category:Sapelo2Category:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 1.2.2 ===Author / Distributor=== Alexey M. Kozlov and Alexandros Stamatakis ===Description=== RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. Its search heuristic is based on iteratively performing a series of Subtree Pruning and Regrafting (SPR) moves, which allows to qu...")
• 18:23, 18 June 2024 User account Kstanier talk contribs was created automatically
• 11:03, 13 June 2024 Jordan talk contribs created page BRAKER-Sapelo2 (Created page with "Category:Sapelo2Category:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.1.6, 3.0.3, 3.0.8 === Author / Distributor === [https://github.com/Gaius-Augustus/BRAKER Gaius-Augustus] === Description === "BRAKER is a pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes." More details are at [https://github.com/Gaius-Augustus/B...")
• 09:39, 30 May 2024 Moses talk contribs created page File:Screen Shot 2024-05-30 at 10.37.57 AM.png
• 09:39, 30 May 2024 Moses talk contribs uploaded File:Screen Shot 2024-05-30 at 10.37.57 AM.png
• 10:42, 24 May 2024 User account Jordan talk contribs was created by Jerky talk contribs and password was sent by email
• 11:24, 14 May 2024 Chelsea talk contribs created page IQ-Tree-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 1.6.12, 2.2.2.6 ===Author / Distributor=== Please see http://www.iqtree.org/ ===Description=== Efficient phylogenomic software by maximum likelihood. More information: http://www.iqtree.org/ === Running Program === *Version 2.2.2.6, installed in /apps/eb/IQ-TREE/2.2.2.6-gompi-2022a To use this version of IQ-TREE,...")
• 11:22, 14 May 2024 Chelsea talk contribs created page HISAT2-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.1, 3 === Author / Distributor === [https://ccb.jhu.edu/software/hisat2/index.shtml HISAT2] === Description === "HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome)." More...")
• 11:15, 14 May 2024 Chelsea talk contribs created page EIGENSOFT-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 7.2.1 ===Author / Distributor=== [https://www.hsph.harvard.edu/alkes-price/software/ EIGENSOFT] ===Description=== The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006). The EIGENSTRAT method use...")
• 11:14, 14 May 2024 Chelsea talk contribs created page Cytoscape-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 3.9.1 === Author / Distributor === Please see https://cytoscape.org/ === Description === "Cytoscape is an open source software tool for integrating, visualizing, and analyzing data in the context of networks." more details at [http://www.cytoscape.org/documentation_users.html CytoScape] === Running Program ===...")
• 10:36, 14 May 2024 Chelsea talk contribs created page Bowtie2-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.4.1, 2.4.4, 2.4.5, 2.5.2 === Author / Distributor === [http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Bowtie2] === Description === "Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or...")
• 10:32, 14 May 2024 Chelsea talk contribs created page BLAST-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.26 === Author / Distributor === [http://blast.ncbi.nlm.nih.gov/ BLAST] === Description === "Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences." More details...")
• 12:36, 12 April 2024 Chelsea talk contribs created page File:Jupyter-20240412.png
• 12:36, 12 April 2024 Chelsea talk contribs uploaded File:Jupyter-20240412.png
• 21:05, 1 April 2024 Shtsai talk contribs created page Office Hours (Created page with " The GACRC is offering open in-person office hours at several convenient locations on campus to assist users with using GACRC's resources. GACRC staff will be available to hel...")
• 14:09, 6 March 2024 Isaiah talk contribs created page Flankophile-Sapelo2 (Created Flankophile page) Tag: Visual edit
• 17:12, 23 February 2024 Isaiah talk contribs created page Cromwell-Sapelo2 (Creation of page that will serve as the Cromwell instructional wiki) Tag: Visual edit
• 15:49, 16 January 2024 Moses talk contribs created page File:GACRC-Teaching-cluster-new-user-training-workshop bcmb8330 Spring2024.pdf
• 15:49, 16 January 2024 Moses talk contribs uploaded File:GACRC-Teaching-cluster-new-user-training-workshop bcmb8330 Spring2024.pdf
• 13:14, 10 January 2024 Moses talk contribs uploaded a new version of File:GACRC Teaching cluster new user training workshop-phys8601-Spring2024.pdf
• 13:14, 10 January 2024 Moses talk contribs uploaded a new version of File:GACRC Teaching cluster new user training workshop-phys4601-Spring2024.pdf
• 13:08, 9 January 2024 Moses talk contribs created page File:Gacrc handout2024 phys8601.pdf
• 13:08, 9 January 2024 Moses talk contribs uploaded File:Gacrc handout2024 phys8601.pdf
• 13:07, 9 January 2024 Moses talk contribs created page File:Gacrc handout2024 phys4601.pdf
• 13:07, 9 January 2024 Moses talk contribs uploaded File:Gacrc handout2024 phys4601.pdf
• 11:12, 9 January 2024 Moses talk contribs uploaded a new version of File:GACRC Teaching cluster new user training workshop-phys8601-Spring2024.pdf
• 10:59, 9 January 2024 Moses talk contribs created page File:GACRC Teaching cluster new user training workshop-phys8601-Spring2024.pdf
• 10:59, 9 January 2024 Moses talk contribs uploaded File:GACRC Teaching cluster new user training workshop-phys8601-Spring2024.pdf
• 10:59, 9 January 2024 Moses talk contribs uploaded a new version of File:GACRC Teaching cluster new user training workshop-phys4601-Spring2024.pdf
• 09:47, 9 January 2024 Moses talk contribs uploaded a new version of File:GACRC Teaching cluster new user training workshop-phys4601-Spring2024.pdf
• 09:43, 9 January 2024 Moses talk contribs created page File:GACRC Teaching cluster new user training workshop-phys4601-Spring2024.pdf
• 09:43, 9 January 2024 Moses talk contribs uploaded File:GACRC Teaching cluster new user training workshop-phys4601-Spring2024.pdf
• 13:33, 8 January 2024 Moses talk contribs created page File:GACRC-Teaching-cluster-new-user-training-workshop Spring2024.pdf
• 13:33, 8 January 2024 Moses talk contribs uploaded File:GACRC-Teaching-cluster-new-user-training-workshop Spring2024.pdf
• 14:21, 5 January 2024 Chelsea talk contribs created page File:Vscode-password.png
• 14:21, 5 January 2024 Chelsea talk contribs uploaded File:Vscode-password.png
• 14:13, 5 January 2024 Chelsea talk contribs created page File:Vscode-connect.png
• 14:13, 5 January 2024 Chelsea talk contribs uploaded File:Vscode-connect.png
• 11:46, 5 January 2024 Shtsai talk contribs moved page VSCODE to VSCode without leaving a redirect
• 08:42, 3 January 2024 Chelsea talk contribs uploaded a new version of File:Vscode-setup1.png
• 08:41, 3 January 2024 Chelsea talk contribs created page File:Vscode-setup1.png
• 08:41, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-setup1.png
• 08:27, 3 January 2024 Chelsea talk contribs created page File:Vscode-extension.png
• 08:27, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-extension.png
• 08:27, 3 January 2024 Chelsea talk contribs created page File:Vscode-menu.png
• 08:27, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-menu.png
• 21:09, 22 December 2023 Shtsai talk contribs created page Cactus-Sapelo2 (Created page with "Category:Sapelo2Category:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.6.7, 2.6.9, 2.7.0 ===Author...")