User contributions for Isaiah

14:3514:35, 24 April 2025 diff hist 0‎ m Training ‎ Extended the parallel workshop time by 30 minutes to allow for further rambling.
12:3612:36, 24 April 2025 diff hist +3‎ m Training ‎ Fixed a few last minute typos.
12:3412:34, 24 April 2025 diff hist +43‎ N File:GNU Parallel and SLURM Arrays v1.pdf ‎ Fixed a few last-minute typos current

15:1215:12, 23 April 2025 diff hist +43‎ Training ‎ Added the GNU Parallel and SLURM Arrays workshop slides
15:0915:09, 23 April 2025 diff hist +176‎ m Training ‎ Added table for Parallel workshop slides Tag: Visual edit
15:0515:05, 23 April 2025 diff hist +67‎ N File:GNU Parallel and SLURM Arrays.pdf ‎No edit summary current

11:0611:06, 28 March 2025 diff hist +1‎ m Training ‎ Added newline to separate sections.
11:0411:04, 28 March 2025 diff hist +1,148‎ Training ‎ Added the GNU Parallel and SLURM Arrays workshop to the wiki Tag: Visual edit: Switched

10:2710:27, 20 August 2024 diff hist +44‎ m Training ‎ Updated the link to the Kaltura Linux basics playlist

11:1111:11, 18 March 2024 diff hist −9‎ m Flankophile-Sapelo2 ‎ Contents of "Description" also changed to sub-heading 1. Corrected back to paragraph current Tag: Visual edit
11:1011:10, 18 March 2024 diff hist +16‎ Flankophile-Sapelo2 ‎ Updated "Description" section to be sub-heading 1 Tag: Visual edit

16:0216:02, 15 March 2024 diff hist +10,883‎ Flankophile-Sapelo2 ‎ Added the "Running Pipeline Using /lscratch" section. Tag: Visual edit

14:3214:32, 12 March 2024 diff hist +168‎ m Software ‎ Added Flankophile to the list

17:5017:50, 7 March 2024 diff hist −2,505‎ Flankophile-Sapelo2 ‎ Removed Flankophile module and removed sections that stated Flankophile was available as a module Tag: Visual edit
16:5416:54, 7 March 2024 diff hist +94‎ Flankophile-Sapelo2 ‎ Added "load Snakemake module" step to Manual setup section Tag: Visual edit

17:1217:12, 6 March 2024 diff hist 0‎ Flankophile-Sapelo2 ‎ Changed /source/$USER to /scratch/$USER Tag: Visual edit
16:1316:13, 6 March 2024 diff hist +4‎ Flankophile-Sapelo2 ‎ Corrected the grammar in the description of the metadata file (in Requirements section) so that it refers to the input files as plural instead of singular Tag: Visual edit
15:2315:23, 6 March 2024 diff hist +89‎ Flankophile-Sapelo2 ‎ Updated the steps for using the pre-built pipeline so that it explicitly instructs users to enter into an interactive session before loading the Flankophile module Tag: Visual edit
15:1515:15, 6 March 2024 diff hist +18‎ Flankophile-Sapelo2 ‎ Changed "Setup" to "Setting up the Pipeline" for added clarity Tag: Visual edit
15:1415:14, 6 March 2024 diff hist +182‎ Flankophile-Sapelo2 ‎ Added links for the requirements of the pipeline Tag: Visual edit
15:1115:11, 6 March 2024 diff hist −14‎ Flankophile-Sapelo2 ‎ Removed out-of-place bold text Tag: Visual edit
15:0915:09, 6 March 2024 diff hist +11,326‎ N Flankophile-Sapelo2 ‎ Created Flankophile page Tag: Visual edit

12:1012:10, 27 February 2024 diff hist +140‎ Software ‎No edit summary Tag: Visual edit: Switched
11:5511:55, 27 February 2024 diff hist +48‎ Cromwell-Sapelo2 ‎ Formatting current Tag: Visual edit
11:5011:50, 27 February 2024 diff hist +114‎ Cromwell-Sapelo2 ‎ Added "workflow CromwellBowtie2" to WDL segment in "inputs" section for added clarity Tag: Visual edit
11:4711:47, 27 February 2024 diff hist −358‎ Cromwell-Sapelo2 ‎ Some lines continue to overlap despite attempts to fix Tag: Visual edit
11:4311:43, 27 February 2024 diff hist +509‎ Cromwell-Sapelo2 ‎ Clarified how to refer to variable names in the inputs.json file Tag: Visual edit
11:2011:20, 27 February 2024 diff hist +55‎ Cromwell-Sapelo2 ‎ Changed instruction from copying examples into scratch into copying into a subdirectory of scratch Tag: Visual edit
11:1511:15, 27 February 2024 diff hist +21‎ Cromwell-Sapelo2 ‎ Grammar fix to Example Workflow Options File to provide added clarity Tag: Visual edit
11:0811:08, 27 February 2024 diff hist +50‎ Cromwell-Sapelo2 ‎ Added link to Job Submission Script to requirements section Tag: Visual edit
11:0611:06, 27 February 2024 diff hist +280‎ Cromwell-Sapelo2 ‎ Fixed Job submission script subheader Tag: Visual edit
11:0311:03, 27 February 2024 diff hist +4,125‎ Cromwell-Sapelo2 ‎ Finished draft 1.0 Tag: Visual edit

18:0718:07, 26 February 2024 diff hist +3,494‎ Cromwell-Sapelo2 ‎ Added example WDL, inputs.json, and options.json sections and files Tag: Visual edit
16:5516:55, 26 February 2024 diff hist +1,095‎ m Cromwell-Sapelo2 ‎ Added example config file Tag: Visual edit

18:1218:12, 23 February 2024 diff hist +1,434‎ N Cromwell-Sapelo2 ‎ Creation of page that will serve as the Cromwell instructional wiki Tag: Visual edit

15:4415:44, 4 October 2023 diff hist +106‎ m Rocky 8 Transition Guide ‎ Updated description of how to remove old hosts in ~/.ssh/known_hosts file current Tag: Visual edit

10:1610:16, 3 October 2023 diff hist −241‎ m Jupyter-Sapelo2 ‎ Updated the versions of Anaconda3 and jupyter-notebook listed as available to reflect the versions installed and available on Sapelo2. Tag: Visual edit

10:1310:13, 8 September 2023 diff hist +185‎ m SequenceTubeMap-Sapelo2 ‎ Made a note that SSH tunneling may cause the terminal to appear frozen. current Tag: Visual edit

10:1710:17, 7 September 2023 diff hist +182‎ m Software ‎ Added sequenceTubeMap to the list of installed software
10:1510:15, 7 September 2023 diff hist +69‎ SequenceTubeMap-Sapelo2 ‎No edit summary
09:4309:43, 7 September 2023 diff hist +95‎ SequenceTubeMap-Sapelo2 ‎ Grammar changes. Tag: Visual edit
09:2809:28, 7 September 2023 diff hist −1‎ SequenceTubeMap-Sapelo2 ‎ Changed "Example Usage" section from "Sub-heading 2" to "Sub-heading 1". Tag: Visual edit
09:2709:27, 7 September 2023 diff hist −2,060‎ SequenceTubeMap-Sapelo2 ‎ Instead of documenting how to set up the program, this page now simply shows how to use the already set up program. Tag: Visual edit

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