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==GACRC Training==


==Training Sessions==
The GACRC regularly hosts training sessions on a number of subjects relevant to the use of our computational and storage resources. Scheduled trainings will be announced through the GACRC mailing list.
 
'''NOTE: New users are required to attend a Sapelo2 cluster introductory training session and information about that will be sent once an account is requested.'''
 
 
==Regular Training Announcement==
 
In '''June 2025''', the GACRC is hosting 9 training sessions listed below. These training workshops will be offered remotely via Zoom Meeting. Detailed instructions for joining the Zoom meeting will be sent to your UGA email account before each training session you register for.
 
We will offer:
 
1. Linux training for Linux-inexperienced cluster new users (3 sessions)
 
2. Sapelo2 cluster new user training (3 sessions)
 
3. Using Sapelo2 Cluster at the GACRC, Part II (1 session)
 
4. Installing Software Packages in Virtual Environments on Sapelo2 (1 session)  '''''NEW'''''
 
5. Job Parallelization with GNU Parallel and SLURM Arrays (1 session)  '''''NEW'''''
==Event Schedule==
 
This section describes the training workshops that we offer, along with the sessions that are currently scheduled.
 
===Sapelo2 Cluster New User Training===
 
This mandatory training consists of an overview of the structure of Sapelo2 as well as hands-on practice submitting a job along with guidance and best practices when using the Sapelo2 cluster.
 
'''Prerequisites:'''
 
*Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.
 
'''Workshop Training Goals:'''
 
*Understand the layout of Sapelo2
 
*Understand the Sapelo2 file systems
 
*Understand the Sapelo2 partitions
 
*Understand the Sapelo2 software environment
 
*Understand how to request computing resources and submit a computational batch job following the Sapelo2 cluster general workflow
 
*Understand how to initiate an interactive job
 
*Understand how to transfer files to and from the cluster


*Understand how to get support from GACRC support team when you have any issues on cluster


The GACRC regularly hosts training sessions on a number of subjects relevant to the use of our computational and storage resources. Scheduled trainings will be announced through the GACRC mailing list.  
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
! scope="col" |Title
! scope="col" |Date/Time
|-
|Using Sapelo2 Cluster at the GACRC
|May 15th, Thursday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC
|May 21st, Wednesday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC
|June 4th, Wednesday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC
|June 12th, Thursday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC
|June 20th, Friday, 2:00 PM - 4:00 PM
|}
 
 
===Linux Training for Linux-inexperienced Cluster New Users===
The Sapelo2 High Performance Computing (HPC) cluster runs a headless Linux distribution as the operating system on each of its constituent nodes. The term headless refers to the fact that these nodes do not have a desktop graphical user interface (GUI) installed by default. Graphical desktop environments consume resources that analyses could otherwise use, so users employ a command-line interface (CLI) instead. To interact with these resources, users connect to a remote terminal via SSH and execute commands.


'''NOTE: New users are required to attend an introductory training session and information about that will be sent once an account is requested.'''
The Linux Training workshop provides hands-on practice of the fundamental Linux commands necessary to interact with HPC resources.


'''Prerequisite:'''


==Event Announcement==
Please watch the introductory videos on Linux, basic Linux terms, and Linux Paths and Directories (total ~17 minutes) '''before attending the training workshop'''.


*[https://kaltura.uga.edu/media/t/1_81u2kfi2/176125031 Linux]
*[https://kaltura.uga.edu/media/t/1_ol51cuyn/176125031 basic Linux terms]
*[https://kaltura.uga.edu/media/t/1_wdyxhgdg/176125031 Linux Paths and Directories]


The GACRC is going to host '''six''' training workshops in '''January''' and '''twelve''' training workshop in '''February''' of '''2016''' at '''Davison Life Sciences Complex room C128'''. These workshops will provide an introduction to the GACRC Linux high performance computing (HPC) clusters and the Linux basics. We also offer Linux practice sessions for GACRC users to obtain Linux hands-on working experiences.
'''Training Goals:'''


====Training Location====
1. Understand fundamental concepts of Linux working environment (filesystem hierarchy, path, PATH, etc.) 


Davison Life Sciences Complex room C128
2. Know how to use Linux common commands (ls, cd, pwd, cat, more, nano, mkdir, rm, cp, mv, etc.)


120 East Green St, Athens, GA 30602
3. Understand what is Linux bash shell and know how to make a simple Linux script and run it in Linux environment


====Regular New User Training====
'''Scheduled Sessions:'''


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" | Title
! scope="col" | Title
! scope="col" | Date/Time
! scope="col" |Date/Time
|-
|-
| Introduction to HPC Using the New Cluster at GACRC || January 6th, Wednesday, 3:00 PM - 4:30 PM  
|Use Linux on Cluster
|May 19th, Monday, 1:00 PM - 3:00 PM
|-
|-
| Introduction to HPC Using zcluster at GACRC || January 11th, Monday, 10:00 AM - 11:30 AM
|Use Linux on Cluster
|June 2nd, Monday, 1:00 PM - 3:00 PM
|-
|-
| Introduction to HPC Using the New Cluster at GACRC || January 25th, Monday, 10:00 AM - 11:30 AM
|Use Linux on Cluster
|June 10th, Tuesday, 1:00 PM - 3:00 PM
|-
|-
| Introduction to HPC Using zcluster at GACRC || January 27th, Wednesday, 3:00 PM - 4:30 PM
|Use Linux on Cluster
|June 18th, Wednesday, 1:00 PM - 3:00 PM
|}
 
 
===Using Sapelo2 Cluster at the GACRC, Part II ===
This workshop will cover high-performance computing on Sapelo2, including job scheduling, resource requests (CPU, memory, GPU), and techniques for optimizing job performance.
 
'''Prerequisites:'''
*Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.
*Sapelo2 cluster new user training.  Fundamental HPC and Sapelo2 knowledge is required for this advanced Sapelo2 workshop.
 
'''Training Goals:'''
 
1. Learn about high-performance computing framework
 
2. Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?
 
3. How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?
 
4. How can I make my job run more efficiently (through the correct use of software and hardware)?
 
5. A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| Introduction to HPC Using the New Cluster at GACRC || February 8th, Monday, 10:00 AM - 11:30 AM
! scope="col" |Title
! scope="col" |Date/Time
|-
|Using Sapelo2 Cluster at the GACRC, Part II
|May 16th, Friday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC, Part II
|June 27th, Friday, 2:00 PM - 4:00 PM
|}
 
 
===Installing Software Packages in Virtual Environments on Sapelo2 ===
This workshop will cover the basics of virtual environments as well as provide practical guidance and best practices for using virtual environments on the Sapelo2 cluster. Participants will learn the basics of creating and configuring virtual environments, how to install software packages in both a Conda virtual environment and a Python virtual environment, and manage dependencies in their environments.
 
'''Prerequisite:'''
 
Must already have strong understanding of the Linux environment and Sapelo2.
 
'''Training Goals:'''
 
1. Learn how to create a virtual environment on Sapelo2 
 
2. Be able to install software packages into both Conda and Python virtual environments
 
3. Understand how to manage dependencies of their virtual environments
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| Introduction to HPC Using zcluster at GACRC || February 10th, Wednesday, 3:00 PM - 4:30 PM
! scope="col" |Title
! scope="col" |Date/Time
|-
|-
| Introduction to HPC Using zcluster at GACRC || February 22nd, Monday, 10:00 AM - 11:30 AM
|Installing Software Packages in Virtual Environments on Sapelo2
|May 26th, Monday, 2:00 PM - 3:00 PM
|-
|-
| Introduction to HPC Using the New Cluster at GACRC || February 24th, Wednesday, 3:00 PM - 4:30 PM
|Installing Software Packages in Virtual Environments on Sapelo2
|June 17th, Tuesday, 2:00 PM - 3:00 PM
|}
|}


====Linux Basics and Hands-on====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
===Job Parallelization with GNU Parallel and Slurm Arrays ===
|-
Learn how to run multiple commands in parallel using GNU Parallel and Slurm Arrays. These tools greatly reduce the runtime of certain types of jobs by running multiple instances of the same command in parallel. The workshop focuses on problems that involve executing the same command on multiple different inputs. This workshop is intended for users comfortable writing job submission scripts and using a command line. Concurrent and parallel programming techniques are not covered in this workshop.
! scope="col" | Title
 
! scope="col" | Date/Time
'''Prerequisite:'''
 
Must already have strong understanding of the Linux environment and Sapelo2.
 
'''Training Goals:'''
 
1. Understand which jobs benefit from GNU Parallel and Slurm Arrays
 
2. Use GNU Parallel and Slurm Arrays to parallelize jobs
 
3. Understand the differences and similarities between GNU Parallel and Slurm Arrays
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| Introduction to Linux Basics Part-I ||January 13th, 2016, Wednesday, 3:00 PM - 4:30 PM
! scope="col" |Title
! scope="col" |Date/Time
|-
|-
| Linux Hands-on Practice Session (Basic Linux knowledge required) || January 20th, Wednesday, 3:00 PM - 4:30 PM  
|Job Parallelization with GNU Parallel and Slurm Arrays
|May 29th, Thursday, 1:00 PM - 2:30 PM
|-
|-
| Linux Hands-on Practice Session (Basic Linux knowledge required) || February 8th, Monday, 1:00 PM - 2:30 PM
|Job Parallelization with GNU Parallel and Slurm Arrays
|June 26th, Thursday, 1:00 PM - 2:30 PM
|}
 
 
<!--
===Python Basics===
'''Prerequisite:''' No prerequisites
 
'''Training Goals:'''
 
1. Understand Python scientific modules and distributions
 
2. Understand Python general lexical conventions; Python built-in data types, like string, list, tuple, dictionary, etc.
 
3. Understand Python programming structures and procedural programming using functions
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| Introduction to Linux Basics Part-I || February 15th, Monday, 10:00 AM - 11:30 AM
! scope="col" | Title
! scope="col" |Date/Time
|-
|-
| Linux Hands-on Practice Session (Basic Linux knowledge required) || February 17th, Wednesday, 3:00 PM - 4:30 PM
|Python Basics I||Not scheduled
|-
|-
| Introduction to Linux Basics Part-II || February 22nd, Monday, 1:00 PM - 2:30 PM
| Python Basics II||Not scheduled
|-
|-
| Linux Hands-on Practice Session (Basic Linux knowledge required) || February 29th, Monday, 1:00 PM - 2:30 PM
|}
|}


====Topical Sessions====
=== R Basics===
'''Prerequisite:''' No prerequisites
 
'''Training Goals:'''
 
1. Understand fundamentals of R language, e.g. R general lexical conventions, data types, functions, and packages. Part 2 will introduce loops and functions.
 
2. Be able to manipulate and create data frames using built in functions and the dplyr package.
 
3. Interact with your file system and submit R code as a batch job to Sapelo 2. 


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" | Title
! scope="col" | Title
! scope="col" | Date/Time
! scope="col" |Date/Time  
|-
|R Basics I||Not scheduled
|-
|-
| Introduction to GACRC Storage Environment || February 3rd, 2016, Wednesday, 3:00 PM - 4:30 PM
|R Basics II||Not scheduled
|-
|}
 
===Conda===
'''Prerequisite:''' No prerequisites
 
'''Training Goals:'''
 
1. Understand fundamentals of conda environment
 
2. Use conda to create and configure your own virtual environments
 
3. Activate your environments to run python apps from your home directory on Sapelo2
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| How to Install Software on zcluster at GACRC ||  February 15th, 2016, Monday, 1:00 PM - 2:30 PM
! scope="col" |Title
! scope="col" |Date/Time
|-
|-
| How to run NCBI Blast on zcluster at GACRC || February 29th, 2016, Monday, 10:00 AM - 11:30 AM
|Conda Basics ||Not scheduled
|-
|-
|}
|}
-->


'''Who Should Attend: ''' New HPC cluster and zcluster users, or researchers who are interested in learning about the GACRC computing resources and Linux basics (Linux OS, Linux filesystem, shell, and common commands, scripting, etc.).
==How to Register==


The training workshops '''Using Sapelo2 Cluster at the GACRC''' and '''Use Linux on Cluster''' are '''ONLY''' offered to '''new users''' who need user accounts on the GACRC Sapelo2 cluster or current Sapelo2 users seeking a refresher. If you would like to use the cluster, please ask your group PI/UGA faculty member to send us an account creation request for you, using the  [https://uga.teamdynamix.com/TDClient/Requests/ServiceDet?ID=25839|GACRC User Account Request Form].
If you would like to attend the '''Using Sapelo2 Cluster at the GACRC, Part II''', the '''Installing Software Packages in Virtual Environments on Sapelo2''', and/or the '''Job Parallelization with GNU Parallel and Slurm Arrays''' training workshops, please send us a request using the [https://uga.teamdynamix.com/TDClient/Requests/ServiceDet?ID=25852 GACRC Training Request Form]. In your request, please tell us which session(s) you would like to attend.


<!--
==Topic Introduction==
==Topic Introduction==


Title: '''Sap2test cluster migration training'''


Title: '''Introduction to HPC Using the New Cluster at GACRC'''
Focus: Slurm queueing system, including Slurm job commands, job environment variables, and job submission headers, etc.


Focus:
The new software environment on Sap2test


What's the new cluster at GACRC
Other important topics related to Sap2test working environment


New cluster's current computing resources


New cluster software environment
Title: '''Using Sapelo2 Cluster at the GACRC'''


How to operate with the new cluster
Focus: Sapelo2 HPC cluster and computational batch job submission workflow


How to work with the new cluster, e.g., how to run interactive jobs; how to run batch jobs; how to make job submission scripts and request computing resources; how to check job status, etc.
Cluster's storage environment
 
Computational queues on cluster
 
Software environment
 
How to submit computational batch jobs
 
Other tips and guidelines for users
   
   


Title: '''Introduction to HPC Using zcluster at GACRC'''
Title: '''Using Sapelo2 Cluster at the GACRC, Part II'''
 
Focus: More topics on how to use Sapelo2 cluster
 
Learn about high-performance computing framework
 
Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?
 
How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?
 
How can I make my job run more efficiently (through the correct use of software and hardware)?
 
A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2
 
 
Title: '''Use Linux on Cluster'''
 
Focus: Linux OS fundamentals
 
Linux common commands, filesystem, and shell
 
Linux shell scripting basics
 
Common Linux utilities, e.g., grep, sed, find, sort, and awk, etc.
 
Linux Hands-on practice
 
 
Title: '''Python Basics I, II'''
 
Focus of I: Python language overview, scientific modules and distributions
 
Python general lexical conventions
 
Basic built-in data types, like string, list, tuple, dictionary, etc.
 
Focus of II: Programming structures: control flow and loop
 
Function: procedural programming with examples, lambda expression, factory function and generator
 
 
Title: '''R Basics I, II'''
 
Focus of I: R language overview,general lexical conventions, data types, functions, and packages.
 
Basic built-in data types, like string, numeric, list, dataframe etc. Using the dplyr package.
 
Focus of II: Programming structures: control flow, loops and functions


Focus:


What's zcluster at GACRC
Title: '''Python on GACRC Sapelo2 Cluster'''


zcluster current computing resources
Focus: Install Python packages/modules in a user's home directory on Sapelo2 cluster


zcluster software environment
Python versions installed on Sapelo2


How to work with zcluster, e.g., how to run interactive jobs; how to run batch jobs and request computing resources; how to make job submission scripts; how to check job status, etc.
Python environment details on Sapelo2


How to know a Python package is installed or not on Sapelo2


Title: '''Introduction to Linux Basics Part-I'''
How to install a Python package in user's home directory on Sapelo2


Focus:


Linux OS and brief history
Title: '''Do It Yourself: Using Conda to create and run python environments to suit your computing needs effortlessly!'''


Linux command, filesystem, and shell
Focus: Use conda to create and configure your own python virtual environments; Activate your environments to run python apps from your home directory on Sapelo2


Linux common commands, etc.
What is Conda and its environment


Conda on Sapelo2


Title: '''Introduction to Linux Basics Part-II (Basic Linux knowledge required)'''
Use conda to create and configure your own python virtual environments


Focus:
Activate your environments to run python apps from your home directory on Sapelo2


Linux shell


Common practices on Linux shell scripting
Title: '''How to submit and run jobs efficiently and correctly on Sapelo2'''


Common Linux utilities, e.g., sort, find, grep, awk, and sed etc.
Focus: Sapelo2 cluster general workflow and correct computing resource requesting


Overview of Sapelo2 cluster with reference tables and operational diagrams


Title: '''Linux Hands-on Practice Session (Basic Linux knowledge required)'''
Sapelo2 batch job submission workflow taking global scratch as job working space


Focus:
How to request computing resources correctly


Hands-on practice on Linux common commands and shell scripting with common Linux utilities, e.g., sort, find, grep, awk, and sed etc.
How to run pipeline tasks and what are advantages/disadvantages of different options


Sapelo2 cluster guideline and practical tips


Title: '''Introduction to GACRC Storage Environment'''


Focus:
Title: '''GACRC Storage Environment'''


Overview of Linux common commands related to file and folder operations
Focus: Overview of Linux common commands related to file and folder operations


Overview of the storage enviornment of zcluster and the new cluster at GACRC
Overview of the storage environment of zcluster and Sapelo cluster at GACRC


How to transfer data between local and GACRC storage
How to transfer data between local and GACRC storage
Line 159: Line 417:




==How to Register==
Title: '''NCBI Blast application on sapelo'''
 
Focus: Introduction to BLAST
 
BLAST job submission to sapelo
 
Advantages & Disadvantages: NCBI website vs run at sapelo.
 
Understand BLAST output
 
Troubleshooting the BLAST results
 
 
Title: '''NGS application overview at GACRC'''
 
Focus: Overview of Bioinformatics software available on HPC clusters at GACRC
 
It’s a brave new world – NGS and its Applications 
 
Hardware, Software, Databases available at GACRC
 
NGS project: Logistics and resource considerations
 
Best practices, common mistakes, troubleshooting and getting help from GACRC




If you would like to attend, please respond by email to: '''zhuofei@uga.edu''' or '''pakala@uga.edu'''. Also please tell us which session you want to attend.
Title: '''Perl Language Basics I, II'''


We have '''25''' seats in the lab room, so we have a 25 user/workshop limit. Please respond at your earliest convenience to register to guarantee your seat. You are welcome and encouraged to attend those workshops to learn about how to work with the HPC clusters at the GACRC.
Focus of I: Overview of Perl language,  


Perl general scripting style


The GACRC is going to host other training workshops and seminars covering various HPC topics, including HPC introduction, Linux working environment and utilities (Linux Part III), Bioinfomatics applications, scientific programming, etc., in the near future. We will announce those events when they are scheduled.
Perl fundamental data types


The GACRC Web Training page can be found at http://gacrc.uga.edu/help/training/ and the GACRC Wiki Training page can be found at https://wiki.gacrc.uga.edu/wiki/Training, from which you can find detailed information about upcoming and past training sessions from GACRC and download training materials.
Focus of II: Program structure: control flow and loop


Perl subroutine


==Download==
Perl I/O
-->


== Download==


====Regular New User Training====
This section provides the slides that we use for our current workshops and material used for several of our past training events and presentations.
====Sapelo2 Cluster Training====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|[[Media:GACRC_Sapelo2_cluster_new_user_training_workshop_v10.8.pdf]]
|-
|}
 
====Teaching Cluster Training====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:GACRC-Teaching-cluster-new-user-training-workshop-Spring2025.pdf]]
|-
|-
| [[media: Introduction to HPC Using the New Cluster at GACRC Workshop20151109 v6.pdf]]
|}
 
====Linux Training for New Cluster Users====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| [[media: Introduction to HPC Using zcluster at GACRC Workshop20151203 v5.pdf]]
|[[Media:Linux_Training_For_New_Users_Of_Cluster_Suchi_04252019.pdf]]
|-
|-
| [[media: Introduction to HPC Using zcluster at GACRC Workshop Pakala 01272016.pdf]]
|}
 
====Installing Software Packages in Virtual Environments on Sapelo2====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
|[[Media:GACRC_virtual_environments_training_v1.1.pdf]]
|}
|}


====Linux Basics and Hands-on====
====Job Parallelization with GNU Parallel and Slurm Arrays====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:GNU_Parallel_and_SLURM_Arrays_v1.pdf]]
|}
 
====Python Basics====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:Python_Language_Basics_I_v5.1.pdf]]
|-
|[[Media:Python_Language_Basics_II_v5.1.pdf]]
|-
|[[Media:Python_Basics_v6.1.pdf]]
|-
|}
 
====R Basics====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:R Language Basics PowerPoint v2.0.1.pdf|Media:R_Language_Basics_PowerPoint_v2.0.pdf]]
|-
|[[Media:R_Language_Basics_Document_v2.0.pdf]]
|-
|[[Media:R_Language_Basics_part_2_Powerpoint_v1.0.pdf]]
|-
|[[Media:R_Language_Basics_part_2_Document_v1.0.pdf]]
|-
|-
| [[media: Introduction to Linux Basics Part-I Workshop20160113 v3.pdf]]
|}
 
====Perl Basics====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| [[media: Introduction to Linux Basics Part-II Workshop20151130 v2.pdf]]
| [[Media:Perl_Language_Basics_I_Workshop_v1.pdf]]
|-
|-
| [[media: Linux Hands-on Practice 20160120.pdf]]
|}
 
====Sap2test Migration Training====
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
|[[Media:Migrating_to_Slurm_and_new_software_environment.pdf]]
|}
|}
'''Please note:''' To help users familiarize with Slurm and the test cluster environment, we have prepared some training videos that are available from the '''GACRC's Kaltura channel''' at
https://kaltura.uga.edu/channel/GACRC/176125031 (login with MyID and password is required).


====Topical Sessions====
====Topical Sessions====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|
|-
|[[Media:AI_Resources_on_the_GACRC_Sapelo2_Cluster.pdf]]
|-
|[[Media:Using_Sapelo2_Cluster_at_the_GACRC_Part_II_Rocky8.pdf]]
|-
|-
| [[media: Introduction to GACRC Storage Environment Workshop20151109 v2.pdf]]
|[[Media:Using_Conda_on_the_GACRC_Sap2test_cluster_v1.pdf]]
|-
|[[Media:Blast_Workshop_GACRC_02012017.pdf]]
|-
|[[Media:Next-Generation_Sequencing_Applications_at_GACRC_10282016.pdf]]
|-
|-
|}
|}


====Out-Reach/On-Class Talk====
====Out-Reach/In-Class Talk====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
! scope="col" |Dept./Center/Institute
! scope="col" |Type
! scope="col" |Workshop PDF
|-
|BCMB8330 - Spring2025||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330-Spring2025.pdf]]
|-
|PHYS8602 - Spring2025||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-Spring2025.pdf]] ; [[Media:Gacrc_handout2025_phys8602.pdf]]
|-
|Engineering FYOS - Fall 2024|| In-Class||[[Media:GACRC_overview_20240920-FYOS.pdf]]
|-
|CSP seminar - Fall 2024||Out-Reach||[[Media:GACRC_overview_20240820-CSP.pdf]]
|-
|BCMB8330 - Spring2024||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330_Spring2024.pdf]]
|-
|PHYS4601/6601 - Spring2024|| In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601-Spring2024.pdf]] ; [[Media:Gacrc_handout2024_phys4601.pdf]]
|-
|PHYS8601 - Spring2024||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601-Spring2024.pdf]] ; [[Media:Gacrc_handout2024_phys8601.pdf]]
|-
|CSP seminar - Fall 2023||Out-Reach||[[Media:GACRC_overview_20230822-CSP.pdf]]
|-
|BCMB8330 - Spring2023||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330.pdf]]
|-
|PHYS4601/6601 - Spring2023||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] ; [[Media:Gacrc_handout2023_phys4601.pdf]]
|-
|PHYS8602 - Spring2023|| In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf]] ; [[Media:Gacrc_handout2023_phys8602.pdf]]
|-
|-
! scope="col" | Dept./Center/Institute
|ILS GradFIRST course - Fall 2022||Out-Reach||[[Media:GACRC_overview_20220901-ILS.pdf]]
! scope="col" | Type
! scope="col" | Workshop PDF
|-
|-
| The Institute of Bioinformatics and the Quantitative Biology Consulting Group || Out-Reach || [[media: Introduction to HPC Resources at GACRC BBB Talk 20151014.pdf]]
|FYOS1001 - Fall 2022||Out-Reach||[[Media:High_Performance_Computing_(HPC)_on_GACRC_Sapelo2_Cluster.pdf]]
|-
|-
| The Center for Simulational Physics || Out-Reach || [[media: Introduction to HPC Using the New Cluster at GACRC Workshop CSP20150915 v2.pdf]]
|CSP seminar - Fall 2022||Out-Reach||[[Media:GACRC_overview_20220830-CSP.pdf]]
|-
|-
| Microbiology || On-Class (MIBO8150) || [[media: Introduction to HPC Resources at GACRC MIBO8150 20151007.pdf]]
|CSP seminar - Fall 2022||Out-Reach||[[Media:Compile_and_Run_HPC_code_on_Sapelo2.pdf]]
|-
|-
| Statistics || On-Class (STAT8060) || [[media: Introduction to HPC Using zcluster at GACRC Workshop STAT8060 20150826.pdf]]
|Terry College IT - Spring2022||Out-Reach ||[[Media:GACRC_overview_20220506-Terry.pdf]]
|-
|-
| Biochemistry and Molecular Biology || On-Class (BCMB8211) || [[media: Introduction to HPC Using zcluster at GACRC BCMB8211 20160114.pdf]]
|PHYS8601 - Spring2022||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf]]
|-
|-
| Plant Biology || On-Class (PBIO/BINF8350) || [[media: Introduction to HPC Using zcluster at GACRC PBIO-BINF8350 20160115.pdf]]
|PHYS4601/6601 - Spring2022||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] ; [[Media:Gacrc_handout2021_phys4601.pdf]]
|-
|-
| Biochemistry and Molecular Biology || On-Class (BCMB8330) ||[[media:Introduction to HPC Using zcluster at GACRC BCMB8330 20160209.pdf]]
|PHYS8602 - Spring2021 ||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-2021.pdf]] ; [[Media:Gacrc_handout2021_phys8602.pdf]]
|-
|GENE4220 - Fall2020||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop_GENE4220_Fall2020.pdf]]
|-
|College of Veterinary Medicine - Spring2020||Out-Reach (jlslab)||[[Media:Using_GACRC_Sapelo2_Cluster-Advanced_Topics(1).pdf]]
|-
|Byod Data Center - Fall2019||In-Class (FYOS1001)||[[Media:High_Performance_Computing_(HPC)_on_Cluster.pdf]]
|-
|Department of Linguistics - Fall2019||In-class (LING6570)|| [[Media:GACRC_Teaching_cluster_new_user_training_workshop_LING6570_Part2.pdf]]
|-
|The Center for Simulational Physics - Fall2019||Out-Reach (Seminar Talk 20190820)||[[Media:Introduction_to_GACRC_Computing_Facility_-_Sapelo2_Cluster_CSP-Fall2019.pdf]]
|-
|The Center for Simulational Physics||In-Class (PHYS4601/6601)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] [[Media:Gacrc_handout2019_phys4601.pdf]]
|-
| The Center for Simulational Physics||In-Class (PHYS8601)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf]] [[Media:Gacrc_handout2020_phys8601.pdf]]
|-
|The Center for Simulational Physics||In-Class (PHYS8602)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf]] [[Media:Gacrc_handout2019_phys8602.pdf]]
|-
|Food Science - Fall2018||In-Class (FYOS1001)||[[Media:High_Performance_Computing_(HPC)_on_Sapelo2_Cluster_at_GACRC.pdf]]
|-
|The Center for Simulational Physics - Summer2018||Out-Reach (Seminar Talk 20180821)||[[Media:Introduction_to_GACRC_Sapelo2_cluster.pdf]]
|-
|Miller plant science - Summer2018||Out-Reach (jlmlab)||[[Media:Introduction_to_GACRC_Sapelo2_cluster.pdf]]
|-
|Biochemistry and Molecular Biology - Spring2018||In-Class (BCMB8330)||[[Media:GACRC_zcluster_Class_Training_BCMB8330_Spring_2018.pdf]]
|-
|The Center for Simulational Physics - Summer2017||Out-Reach (Seminar Talk 20170831)||[[Media:Introduction_on_HPC_Resources_at_the_GACRC.pdf]]
|-
|Computational Physics - Spring2017 ||In-class (PHYS4601/6601)||[[Media:Phys4601.pdf]]
|-
|Computational Physics - Spring2017||In-class (PHYS8602)||[[Media:Phys8602.pdf]]
|-
|The Institute of Bioinformatics and the Quantitative Biology Consulting Group||Out-Reach||[[Media:Introduction_to_HPC_Resources_at_GACRC_BBB_Talk_20151014.pdf]]
|-
|The Center for Simulational Physics||Out-Reach (Seminar Talk 20160906)||[[Media:Introduction_to_Sapelo_Computing_Resources_at_GACRC_Workshop20160906.pdf]]
|-
|Microbiology||In-Class (MIBO8150)||[[Media:Introduction_to_HPC_Resources_at_GACRC_MIBO8150_20160926.pdf]]
|-
|Statistics||In-Class (STAT8060)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_Workshop_STAT8060_20150826.pdf]]
|-
|Biochemistry and Molecular Biology||In-Class (BCMB8211)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BCMB8211_20160114.pdf]]
|-
|Plant Biology||In-Class (PBIO/BINF8350)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO-BINF8350_20160115.pdf]]
|-
|Plant Biology - Bioinformatics Applications Fall2016||In-Class (PBIO4550)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO_4550_08182016.pdf]]
|-
|Bioinformatics - Essential Computing Skills for Biologists Fall2016||In-Class (BINF4005)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BINF_4005_08312016.pdf]]
|-
|Computers in Experimental Genetics Fall2016||In-Class (GENE4220)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_GENE_4220_10192016.pdf]]
|-
|Statistics - Advanced Applications and Computing in R Fall2016||In-Class (STAT8330)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_STAT8330_11022016.pdf]]
|}
|}


'''NOTE:''' The slides may become outdated and you should always check GACRC Wiki for up to date information.
'''NOTE:''' The slides may become outdated and you should always check GACRC Wiki for up to date information.


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==Past Sessions==


==Past Sessions==
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[[Past Sessions in 2020]]
 
[[Past Sessions in 2019]]
 
[[Past Sessions in 2018]]
 
[[Past Sessions in 2017]]
 
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[[Past Sessions in 2015]]
[[Past Sessions in 2015]]
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Latest revision as of 15:02, 14 May 2025

GACRC Training

The GACRC regularly hosts training sessions on a number of subjects relevant to the use of our computational and storage resources. Scheduled trainings will be announced through the GACRC mailing list.

NOTE: New users are required to attend a Sapelo2 cluster introductory training session and information about that will be sent once an account is requested.


Regular Training Announcement

In June 2025, the GACRC is hosting 9 training sessions listed below. These training workshops will be offered remotely via Zoom Meeting. Detailed instructions for joining the Zoom meeting will be sent to your UGA email account before each training session you register for.

We will offer:

1. Linux training for Linux-inexperienced cluster new users (3 sessions)

2. Sapelo2 cluster new user training (3 sessions)

3. Using Sapelo2 Cluster at the GACRC, Part II (1 session)

4. Installing Software Packages in Virtual Environments on Sapelo2 (1 session) NEW

5. Job Parallelization with GNU Parallel and SLURM Arrays (1 session) NEW

Event Schedule

This section describes the training workshops that we offer, along with the sessions that are currently scheduled.

Sapelo2 Cluster New User Training

This mandatory training consists of an overview of the structure of Sapelo2 as well as hands-on practice submitting a job along with guidance and best practices when using the Sapelo2 cluster.

Prerequisites:

  • Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.

Workshop Training Goals:

  • Understand the layout of Sapelo2
  • Understand the Sapelo2 file systems
  • Understand the Sapelo2 partitions
  • Understand the Sapelo2 software environment
  • Understand how to request computing resources and submit a computational batch job following the Sapelo2 cluster general workflow
  • Understand how to initiate an interactive job
  • Understand how to transfer files to and from the cluster
  • Understand how to get support from GACRC support team when you have any issues on cluster

Scheduled Sessions:

Title Date/Time
Using Sapelo2 Cluster at the GACRC May 15th, Thursday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC May 21st, Wednesday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 4th, Wednesday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 12th, Thursday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 20th, Friday, 2:00 PM - 4:00 PM


Linux Training for Linux-inexperienced Cluster New Users

The Sapelo2 High Performance Computing (HPC) cluster runs a headless Linux distribution as the operating system on each of its constituent nodes. The term headless refers to the fact that these nodes do not have a desktop graphical user interface (GUI) installed by default. Graphical desktop environments consume resources that analyses could otherwise use, so users employ a command-line interface (CLI) instead. To interact with these resources, users connect to a remote terminal via SSH and execute commands.

The Linux Training workshop provides hands-on practice of the fundamental Linux commands necessary to interact with HPC resources.

Prerequisite:

Please watch the introductory videos on Linux, basic Linux terms, and Linux Paths and Directories (total ~17 minutes) before attending the training workshop.

Training Goals:

1. Understand fundamental concepts of Linux working environment (filesystem hierarchy, path, PATH, etc.)

2. Know how to use Linux common commands (ls, cd, pwd, cat, more, nano, mkdir, rm, cp, mv, etc.)

3. Understand what is Linux bash shell and know how to make a simple Linux script and run it in Linux environment

Scheduled Sessions:

Title Date/Time
Use Linux on Cluster May 19th, Monday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 2nd, Monday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 10th, Tuesday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 18th, Wednesday, 1:00 PM - 3:00 PM


Using Sapelo2 Cluster at the GACRC, Part II

This workshop will cover high-performance computing on Sapelo2, including job scheduling, resource requests (CPU, memory, GPU), and techniques for optimizing job performance.

Prerequisites:

  • Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.
  • Sapelo2 cluster new user training. Fundamental HPC and Sapelo2 knowledge is required for this advanced Sapelo2 workshop.

Training Goals:

1. Learn about high-performance computing framework

2. Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?

3. How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?

4. How can I make my job run more efficiently (through the correct use of software and hardware)?

5. A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2

Scheduled Sessions:

Title Date/Time
Using Sapelo2 Cluster at the GACRC, Part II May 16th, Friday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC, Part II June 27th, Friday, 2:00 PM - 4:00 PM


Installing Software Packages in Virtual Environments on Sapelo2

This workshop will cover the basics of virtual environments as well as provide practical guidance and best practices for using virtual environments on the Sapelo2 cluster. Participants will learn the basics of creating and configuring virtual environments, how to install software packages in both a Conda virtual environment and a Python virtual environment, and manage dependencies in their environments.

Prerequisite:

Must already have strong understanding of the Linux environment and Sapelo2.

Training Goals:

1. Learn how to create a virtual environment on Sapelo2

2. Be able to install software packages into both Conda and Python virtual environments

3. Understand how to manage dependencies of their virtual environments

Scheduled Sessions:

Title Date/Time
Installing Software Packages in Virtual Environments on Sapelo2 May 26th, Monday, 2:00 PM - 3:00 PM
Installing Software Packages in Virtual Environments on Sapelo2 June 17th, Tuesday, 2:00 PM - 3:00 PM


Job Parallelization with GNU Parallel and Slurm Arrays

Learn how to run multiple commands in parallel using GNU Parallel and Slurm Arrays. These tools greatly reduce the runtime of certain types of jobs by running multiple instances of the same command in parallel. The workshop focuses on problems that involve executing the same command on multiple different inputs. This workshop is intended for users comfortable writing job submission scripts and using a command line. Concurrent and parallel programming techniques are not covered in this workshop.

Prerequisite:

Must already have strong understanding of the Linux environment and Sapelo2.

Training Goals:

1. Understand which jobs benefit from GNU Parallel and Slurm Arrays

2. Use GNU Parallel and Slurm Arrays to parallelize jobs

3. Understand the differences and similarities between GNU Parallel and Slurm Arrays

Scheduled Sessions:

Title Date/Time
Job Parallelization with GNU Parallel and Slurm Arrays May 29th, Thursday, 1:00 PM - 2:30 PM
Job Parallelization with GNU Parallel and Slurm Arrays June 26th, Thursday, 1:00 PM - 2:30 PM


How to Register

The training workshops Using Sapelo2 Cluster at the GACRC and Use Linux on Cluster are ONLY offered to new users who need user accounts on the GACRC Sapelo2 cluster or current Sapelo2 users seeking a refresher. If you would like to use the cluster, please ask your group PI/UGA faculty member to send us an account creation request for you, using the User Account Request Form.

If you would like to attend the Using Sapelo2 Cluster at the GACRC, Part II, the Installing Software Packages in Virtual Environments on Sapelo2, and/or the Job Parallelization with GNU Parallel and Slurm Arrays training workshops, please send us a request using the GACRC Training Request Form. In your request, please tell us which session(s) you would like to attend.


Download

This section provides the slides that we use for our current workshops and material used for several of our past training events and presentations.

Sapelo2 Cluster Training

Media:GACRC_Sapelo2_cluster_new_user_training_workshop_v10.8.pdf

Teaching Cluster Training

Media:GACRC-Teaching-cluster-new-user-training-workshop-Spring2025.pdf

Linux Training for New Cluster Users

Media:Linux_Training_For_New_Users_Of_Cluster_Suchi_04252019.pdf

Installing Software Packages in Virtual Environments on Sapelo2

Media:GACRC_virtual_environments_training_v1.1.pdf

Job Parallelization with GNU Parallel and Slurm Arrays

Media:GNU_Parallel_and_SLURM_Arrays_v1.pdf

Python Basics

Media:Python_Language_Basics_I_v5.1.pdf
Media:Python_Language_Basics_II_v5.1.pdf
Media:Python_Basics_v6.1.pdf

R Basics

Media:R_Language_Basics_PowerPoint_v2.0.pdf
Media:R_Language_Basics_Document_v2.0.pdf
Media:R_Language_Basics_part_2_Powerpoint_v1.0.pdf
Media:R_Language_Basics_part_2_Document_v1.0.pdf

Perl Basics

Media:Perl_Language_Basics_I_Workshop_v1.pdf

Sap2test Migration Training

Media:Migrating_to_Slurm_and_new_software_environment.pdf

Please note: To help users familiarize with Slurm and the test cluster environment, we have prepared some training videos that are available from the GACRC's Kaltura channel at https://kaltura.uga.edu/channel/GACRC/176125031 (login with MyID and password is required).

Topical Sessions

Media:AI_Resources_on_the_GACRC_Sapelo2_Cluster.pdf
Media:Using_Sapelo2_Cluster_at_the_GACRC_Part_II_Rocky8.pdf
Media:Using_Conda_on_the_GACRC_Sap2test_cluster_v1.pdf
Media:Blast_Workshop_GACRC_02012017.pdf
Media:Next-Generation_Sequencing_Applications_at_GACRC_10282016.pdf

Out-Reach/In-Class Talk

Dept./Center/Institute Type Workshop PDF
BCMB8330 - Spring2025 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330-Spring2025.pdf
PHYS8602 - Spring2025 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-Spring2025.pdf ; Media:Gacrc_handout2025_phys8602.pdf
Engineering FYOS - Fall 2024 In-Class Media:GACRC_overview_20240920-FYOS.pdf
CSP seminar - Fall 2024 Out-Reach Media:GACRC_overview_20240820-CSP.pdf
BCMB8330 - Spring2024 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330_Spring2024.pdf
PHYS4601/6601 - Spring2024 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601-Spring2024.pdf ; Media:Gacrc_handout2024_phys4601.pdf
PHYS8601 - Spring2024 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601-Spring2024.pdf ; Media:Gacrc_handout2024_phys8601.pdf
CSP seminar - Fall 2023 Out-Reach Media:GACRC_overview_20230822-CSP.pdf
BCMB8330 - Spring2023 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330.pdf
PHYS4601/6601 - Spring2023 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf ; Media:Gacrc_handout2023_phys4601.pdf
PHYS8602 - Spring2023 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf ; Media:Gacrc_handout2023_phys8602.pdf
ILS GradFIRST course - Fall 2022 Out-Reach Media:GACRC_overview_20220901-ILS.pdf
FYOS1001 - Fall 2022 Out-Reach Media:High_Performance_Computing_(HPC)_on_GACRC_Sapelo2_Cluster.pdf
CSP seminar - Fall 2022 Out-Reach Media:GACRC_overview_20220830-CSP.pdf
CSP seminar - Fall 2022 Out-Reach Media:Compile_and_Run_HPC_code_on_Sapelo2.pdf
Terry College IT - Spring2022 Out-Reach Media:GACRC_overview_20220506-Terry.pdf
PHYS8601 - Spring2022 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf
PHYS4601/6601 - Spring2022 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf ; Media:Gacrc_handout2021_phys4601.pdf
PHYS8602 - Spring2021 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-2021.pdf ; Media:Gacrc_handout2021_phys8602.pdf
GENE4220 - Fall2020 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop_GENE4220_Fall2020.pdf
College of Veterinary Medicine - Spring2020 Out-Reach (jlslab) Media:Using_GACRC_Sapelo2_Cluster-Advanced_Topics(1).pdf
Byod Data Center - Fall2019 In-Class (FYOS1001) Media:High_Performance_Computing_(HPC)_on_Cluster.pdf
Department of Linguistics - Fall2019 In-class (LING6570) Media:GACRC_Teaching_cluster_new_user_training_workshop_LING6570_Part2.pdf
The Center for Simulational Physics - Fall2019 Out-Reach (Seminar Talk 20190820) Media:Introduction_to_GACRC_Computing_Facility_-_Sapelo2_Cluster_CSP-Fall2019.pdf
The Center for Simulational Physics In-Class (PHYS4601/6601) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf Media:Gacrc_handout2019_phys4601.pdf
The Center for Simulational Physics In-Class (PHYS8601) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf Media:Gacrc_handout2020_phys8601.pdf
The Center for Simulational Physics In-Class (PHYS8602) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf Media:Gacrc_handout2019_phys8602.pdf
Food Science - Fall2018 In-Class (FYOS1001) Media:High_Performance_Computing_(HPC)_on_Sapelo2_Cluster_at_GACRC.pdf
The Center for Simulational Physics - Summer2018 Out-Reach (Seminar Talk 20180821) Media:Introduction_to_GACRC_Sapelo2_cluster.pdf
Miller plant science - Summer2018 Out-Reach (jlmlab) Media:Introduction_to_GACRC_Sapelo2_cluster.pdf
Biochemistry and Molecular Biology - Spring2018 In-Class (BCMB8330) Media:GACRC_zcluster_Class_Training_BCMB8330_Spring_2018.pdf
The Center for Simulational Physics - Summer2017 Out-Reach (Seminar Talk 20170831) Media:Introduction_on_HPC_Resources_at_the_GACRC.pdf
Computational Physics - Spring2017 In-class (PHYS4601/6601) Media:Phys4601.pdf
Computational Physics - Spring2017 In-class (PHYS8602) Media:Phys8602.pdf
The Institute of Bioinformatics and the Quantitative Biology Consulting Group Out-Reach Media:Introduction_to_HPC_Resources_at_GACRC_BBB_Talk_20151014.pdf
The Center for Simulational Physics Out-Reach (Seminar Talk 20160906) Media:Introduction_to_Sapelo_Computing_Resources_at_GACRC_Workshop20160906.pdf
Microbiology In-Class (MIBO8150) Media:Introduction_to_HPC_Resources_at_GACRC_MIBO8150_20160926.pdf
Statistics In-Class (STAT8060) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_Workshop_STAT8060_20150826.pdf
Biochemistry and Molecular Biology In-Class (BCMB8211) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BCMB8211_20160114.pdf
Plant Biology In-Class (PBIO/BINF8350) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO-BINF8350_20160115.pdf
Plant Biology - Bioinformatics Applications Fall2016 In-Class (PBIO4550) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO_4550_08182016.pdf
Bioinformatics - Essential Computing Skills for Biologists Fall2016 In-Class (BINF4005) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BINF_4005_08312016.pdf
Computers in Experimental Genetics Fall2016 In-Class (GENE4220) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_GENE_4220_10192016.pdf
Statistics - Advanced Applications and Computing in R Fall2016 In-Class (STAT8330) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_STAT8330_11022016.pdf

NOTE: The slides may become outdated and you should always check GACRC Wiki for up to date information.


Retrieved from "https://wiki.gacrc.uga.edu/index.php?title=Training&oldid=22391"