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==Regular Training Announcement==
==Regular Training Announcement==


In '''February''' 2019, the GACRC is going to host nine regular training sessions (Sapelo2 cluster new user training, Linux basics, Python basics) and one topical session on basic programming in R language.
In '''June 2025''', the GACRC is hosting 9 training sessions listed below. These training workshops will be offered remotely via Zoom Meeting. Detailed instructions for joining the Zoom meeting will be sent to your UGA email account before each training session you register for.


We offer:
We will offer:


1. Sapelo2 cluster new user training (3 sessions)
1. Linux training for Linux-inexperienced cluster new users (3 sessions)


2. Linux training for Linux-inexperienced cluster new users (4 sessions)
2. Sapelo2 cluster new user training (3 sessions)


3. Python basics (2 sessions)
3. Using Sapelo2 Cluster at the GACRC, Part II (1 session)


4. Basic Programming in R (1 two-hour session)
4. Installing Software Packages in Virtual Environments on Sapelo2 (1 session)   '''''NEW'''''


5. Job Parallelization with GNU Parallel and SLURM Arrays (1 session)  '''''NEW'''''
==Event Schedule==
This section describes the training workshops that we offer, along with the sessions that are currently scheduled.
===Sapelo2 Cluster New User Training===
This mandatory training consists of an overview of the structure of Sapelo2 as well as hands-on practice submitting a job along with guidance and best practices when using the Sapelo2 cluster.


====Training Location:====
'''Prerequisites:'''


Davison Life Sciences Complex (Life Science Building), Room C128
*Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.


120 East Green Street, Athens, GA 30602
'''Workshop Training Goals:'''


*Understand the layout of Sapelo2


==Event Schedule==
*Understand the Sapelo2 file systems


*Understand the Sapelo2 partitions


===Sapelo2 Cluster New User Training===
*Understand the Sapelo2 software environment
'''Prerequisite:''' Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.


'''Training Goal:'''
*Understand how to request computing resources and submit a computational batch job following the Sapelo2 cluster general workflow


1. Know how to log on to cluster in or off campus
*Understand how to initiate an interactive job


2. Understand cluster storage and software environment
*Understand how to transfer files to and from the cluster


3. Know how to submit a computational batch job following Sapelo2 cluster general workflow
*Understand how to get support from GACRC support team when you have any issues on cluster


4. Know how to find support from the GACRC support team when you have any issues running on cluster
'''Scheduled Sessions:'''


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{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" | Title
! scope="col" |Title
! scope="col" | Date/Time
! scope="col" |Date/Time  
|-
|Using Sapelo2 Cluster at the GACRC
|May 15th, Thursday, 2:00 PM - 4:00 PM
|-
|-
| Using Sapelo2 Cluster at the GACRC || February 7th, Thursday, 1:45 PM - 3:30 PM
|Using Sapelo2 Cluster at the GACRC
|May 21st, Wednesday, 2:00 PM - 4:00 PM
|-
|-
| Using Sapelo2 Cluster at the GACRC || February 12th, Tuesday, 1:45 PM - 3:30 PM
|Using Sapelo2 Cluster at the GACRC
|June 4th, Wednesday, 2:00 PM - 4:00 PM
|-
|-
| Using Sapelo2 Cluster at the GACRC || February 25th, Monday, 1:00 PM - 3:00 PM
|Using Sapelo2 Cluster at the GACRC
|June 12th, Thursday, 2:00 PM - 4:00 PM
|-
|-
|Using Sapelo2 Cluster at the GACRC
|June 20th, Friday, 2:00 PM - 4:00 PM
|}
|}


===Linux Training for Linux-inexperienced Cluster New Users===
===Linux Training for Linux-inexperienced Cluster New Users===
'''Prerequisite:''' No prerequisites
The Sapelo2 High Performance Computing (HPC) cluster runs a headless Linux distribution as the operating system on each of its constituent nodes. The term headless refers to the fact that these nodes do not have a desktop graphical user interface (GUI) installed by default. Graphical desktop environments consume resources that analyses could otherwise use, so users employ a command-line interface (CLI) instead. To interact with these resources, users connect to a remote terminal via SSH and execute commands.
 
The Linux Training workshop provides hands-on practice of the fundamental Linux commands necessary to interact with HPC resources.
 
'''Prerequisite:'''  
 
Please watch the introductory videos on Linux, basic Linux terms, and Linux Paths and Directories (total ~17 minutes) '''before attending the training workshop'''.
 
*[https://kaltura.uga.edu/media/t/1_81u2kfi2/176125031 Linux]
*[https://kaltura.uga.edu/media/t/1_ol51cuyn/176125031 basic Linux terms]
*[https://kaltura.uga.edu/media/t/1_wdyxhgdg/176125031 Linux Paths and Directories]


'''Training Goal:'''
'''Training Goals:'''


1. Understand fundamental concepts of Linux working environment (filesystem hierarchy, path, PATH, etc.)   
1. Understand fundamental concepts of Linux working environment (filesystem hierarchy, path, PATH, etc.)   
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3. Understand what is Linux bash shell and know how to make a simple Linux script and run it in Linux environment
3. Understand what is Linux bash shell and know how to make a simple Linux script and run it in Linux environment


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'''Scheduled Sessions:'''
 
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|-
! scope="col" | Title
! scope="col" | Title
! scope="col" | Date/Time
! scope="col" |Date/Time
|-
|-
| Use Linux on Cluster || February 4th, Monday, 1:00 PM - 3:00 PM
|Use Linux on Cluster
|May 19th, Monday, 1:00 PM - 3:00 PM
|-
|-
| Use Linux on Cluster || February 14th, Thursday, 1:45 PM - 3:30 PM
|Use Linux on Cluster
|June 2nd, Monday, 1:00 PM - 3:00 PM
|-
|-
| Use Linux on Cluster || February 21st, Thursday, 1:45 PM - 3:30 PM
|Use Linux on Cluster
|June 10th, Tuesday, 1:00 PM - 3:00 PM
|-
|-
| Use Linux on Cluster || February 26th, Tuesday, 1:45 PM - 3:30 PM
|Use Linux on Cluster
|June 18th, Wednesday, 1:00 PM - 3:00 PM
|}
 
 
===Using Sapelo2 Cluster at the GACRC, Part II ===
This workshop will cover high-performance computing on Sapelo2, including job scheduling, resource requests (CPU, memory, GPU), and techniques for optimizing job performance.
 
'''Prerequisites:'''
*Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.
*Sapelo2 cluster new user training.  Fundamental HPC and Sapelo2 knowledge is required for this advanced Sapelo2 workshop.
 
'''Training Goals:'''
 
1. Learn about high-performance computing framework
 
2. Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?
 
3. How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?
 
4. How can I make my job run more efficiently (through the correct use of software and hardware)?
 
5. A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" |Title
! scope="col" |Date/Time
|-
|Using Sapelo2 Cluster at the GACRC, Part II
|May 16th, Friday, 2:00 PM - 4:00 PM
|-
|Using Sapelo2 Cluster at the GACRC, Part II
|June 27th, Friday, 2:00 PM - 4:00 PM
|}
|}


===Python Basics I/II===
'''Prerequisite:''' Linux basics


'''Training Goal:'''
===Installing Software Packages in Virtual Environments on Sapelo2 ===
This workshop will cover the basics of virtual environments as well as provide practical guidance and best practices for using virtual environments on the Sapelo2 cluster. Participants will learn the basics of creating and configuring virtual environments, how to install software packages in both a Conda virtual environment and a Python virtual environment, and manage dependencies in their environments.


1. Understand fundamental concepts of Python (interpreter, module, package, distribution, 3rd-party-modules like numpy, scipy, etc.) 
'''Prerequisite:'''


2. Know how to run python interactively and how to make a simple python script and run it on python command line
Must already have strong understanding of the Linux environment and Sapelo2.


3. Understand Python language fundamentals, e.g., built-in data types (list, tuple, string, etc.), functions, built-in modules (os, sys, re, csv, etc.)
'''Training Goals:'''


4. Know how to define a function and call it for basic text/csv file I/O
1. Learn how to create a virtual environment on Sapelo2 


5. Understand Python object-oriented programming (OOP) fundamentals using class, inheritance and polymorphism (Python-II)
2. Be able to install software packages into both Conda and Python virtual environments


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3. Understand how to manage dependencies of their virtual environments
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" | Title
! scope="col" |Title
! scope="col" | Date/Time
! scope="col" |Date/Time
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|Installing Software Packages in Virtual Environments on Sapelo2
|May 26th, Monday, 2:00 PM - 3:00 PM
|-
|-
| Python Language Basics II || January 31st, Thursday, 1:45 PM - 3:30 PM
|Installing Software Packages in Virtual Environments on Sapelo2
|June 17th, Tuesday, 2:00 PM - 3:00 PM
|}
 
 
===Job Parallelization with GNU Parallel and Slurm Arrays ===
Learn how to run multiple commands in parallel using GNU Parallel and Slurm Arrays. These tools greatly reduce the runtime of certain types of jobs by running multiple instances of the same command in parallel. The workshop focuses on problems that involve executing the same command on multiple different inputs. This workshop is intended for users comfortable writing job submission scripts and using a command line. Concurrent and parallel programming techniques are not covered in this workshop.
 
'''Prerequisite:'''
 
Must already have strong understanding of the Linux environment and Sapelo2.
 
'''Training Goals:'''
 
1. Understand which jobs benefit from GNU Parallel and Slurm Arrays
 
2. Use GNU Parallel and Slurm Arrays to parallelize jobs
 
3. Understand the differences and similarities between GNU Parallel and Slurm Arrays
 
'''Scheduled Sessions:'''
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| Python Language Basics I || February 11th, Monday, 1:00 PM - 3:00 PM
! scope="col" |Title
! scope="col" |Date/Time
|-
|-
| Python Language Basics II || February 28th, Thursday, 1:45 PM - 3:30 PM
|Job Parallelization with GNU Parallel and Slurm Arrays
|May 29th, Thursday, 1:00 PM - 2:30 PM
|-
|-
|Job Parallelization with GNU Parallel and Slurm Arrays
|June 26th, Thursday, 1:00 PM - 2:30 PM
|}
|}


===Topical Sessions===
 
<!--
===Python Basics===
'''Prerequisite:''' No prerequisites
'''Prerequisite:''' No prerequisites


'''Training Goal:'''
'''Training Goals:'''
 
1. Understand Python scientific modules and distributions
 
2. Understand Python general lexical conventions; Python built-in data types, like string, list, tuple, dictionary, etc.
 
3. Understand Python programming structures and procedural programming using functions
 
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
! scope="col" | Title
! scope="col" |Date/Time
|-
|Python Basics I||Not scheduled
|-
| Python Basics II||Not scheduled
|-
|}
 
=== R Basics===
'''Prerequisite:''' No prerequisites


1. Use probability functions in R
'''Training Goals:'''


2. Make a function for simple computational tasks
1. Understand fundamentals of R language, e.g. R general lexical conventions, data types, functions, and packages. Part 2 will introduce loops and functions.


3. Understand R programming structures of loops and branching statements
2. Be able to manipulate and create data frames using built in functions and the dplyr package.


4. Optimize a function
3. Interact with your file system and submit R code as a batch job to Sapelo 2. 


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{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
! scope="col" | Title
! scope="col" | Title
! scope="col" | Date/Time
! scope="col" |Date/Time  
|-
|-
| Basic Programming in R || February 18th,  Monday, 1:00 PM - 3:00 PM
|R Basics I||Not scheduled
|-
|R Basics II||Not scheduled
|-
|-
|}
|}
===Conda===
'''Prerequisite:''' No prerequisites
'''Training Goals:'''
1. Understand fundamentals of conda environment
2. Use conda to create and configure your own virtual environments
3. Activate your environments to run python apps from your home directory on Sapelo2
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
! scope="col" |Title
! scope="col" |Date/Time
|-
|Conda Basics ||Not scheduled
|-
|}
-->


==How to Register==
==How to Register==


If you would like to attend, please respond by email to: '''pakala@uga.edu'''. Also please tell us which session(s) you want to attend.  
The training workshops '''Using Sapelo2 Cluster at the GACRC''' and '''Use Linux on Cluster''' are '''ONLY''' offered to '''new users''' who need user accounts on the GACRC Sapelo2 cluster or current Sapelo2 users seeking a refresher. If you would like to use the cluster, please ask your group PI/UGA faculty member to send us an account creation request for you, using the  [https://uga.teamdynamix.com/TDClient/Requests/ServiceDet?ID=25839|GACRC User Account Request Form].
If you would like to attend the '''Using Sapelo2 Cluster at the GACRC, Part II''', the '''Installing Software Packages in Virtual Environments on Sapelo2''', and/or the '''Job Parallelization with GNU Parallel and Slurm Arrays''' training workshops, please send us a request using the [https://uga.teamdynamix.com/TDClient/Requests/ServiceDet?ID=25852 GACRC Training Request Form]. In your request, please tell us which session(s) you would like to attend.


We have '''25''' seats in the lab room, so we have a 25 user/workshop limit. Please respond at your earliest convenience to register to guarantee your seat. You are welcome and encouraged to attend those workshops to learn about how to work with the HPC clusters at the GACRC.


The GACRC is going to host other training workshops and seminars covering various HPC topics, including HPC fundamental introduction, Linux introductory III (Linux working environment and utilities), Bioinfomatics applications on Sapelo cluster, Perl, R, C/C++/Fortran programming, etc., in the near future. We will announce those events when they are scheduled.
<!--
==Topic Introduction==


The GACRC Web Training page can be found at http://gacrc.uga.edu/help/training/ and the GACRC Wiki Training page can be found at https://wiki.gacrc.uga.edu/wiki/Training, from which you can find detailed information about upcoming and past training sessions from GACRC and download training materials.
Title: '''Sap2test cluster migration training'''


Focus:  Slurm queueing system, including Slurm job commands, job environment variables, and job submission headers, etc.
The new software environment on Sap2test
Other important topics related to Sap2test working environment


==Topic Introduction==


Title: '''Using Sapelo2 Cluster at the GACRC'''
Title: '''Using Sapelo2 Cluster at the GACRC'''


Focus: Sapelo2 cluster and batch job workflow
Focus: Sapelo2 HPC cluster and computational batch job submission workflow


Cluster's storage environment
Cluster's storage environment


Computing queues on cluster
Computational queues on cluster


Software environment
Software environment


Batch job workflow, how to submit a computational batch job
How to submit computational batch jobs


Other tips and guidelines for Sapelo2 users
Other tips and guidelines for users
   
   
Title: '''Using Sapelo2 Cluster at the GACRC, Part II'''
Focus: More topics on how to use Sapelo2 cluster
Learn about high-performance computing framework
Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?
How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?
How can I make my job run more efficiently (through the correct use of software and hardware)?
A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2


Title: '''Use Linux on Cluster'''
Title: '''Use Linux on Cluster'''
Line 166: Line 332:
Focus: Linux OS fundamentals
Focus: Linux OS fundamentals


Linux common command, filesystem, and shell
Linux common commands, filesystem, and shell


Linux shell scripting
Linux shell scripting basics


Common Linux utilities, e.g., sort, find, grep, awk, and sed etc.
Common Linux utilities, e.g., grep, sed, find, sort, and awk, etc.


Linux Hands-on practice
Linux Hands-on practice




Title: '''Python Language Basics I, II'''
Title: '''Python Basics I, II'''
 
Focus of I: Python language overview, scientific modules and distributions
 
Python general lexical conventions
 
Basic built-in data types, like string, list, tuple, dictionary, etc.
 
Focus of II: Programming structures: control flow and loop
 
Function: procedural programming with examples, lambda expression, factory function and generator


Focus of I: Overview of Python language, scientific modules and distributions


General Lexical conventions
Title: '''R Basics I, II'''


Basic built-in data types
Focus of I: R language overview,general lexical conventions, data types, functions, and packages.


Focus of II: Program structure: control flow and loop
Basic built-in data types, like string, numeric, list, dataframe etc. Using the dplyr package.


Function: procedural and functional programming with examples
Focus of II: Programming structures: control flow, loops and functions




Title: '''Python on GACRC Sapelo2 Cluster'''
Title: '''Python on GACRC Sapelo2 Cluster'''


Focus: Installation of Python packages/modules on Sapelo2 cluster
Focus: Install Python packages/modules in a user's home directory on Sapelo2 cluster


How to know Python versions installed on Sapelo2
Python versions installed on Sapelo2


How to know Python environment details on Sapelo2  
Python environment details on Sapelo2  


How to know if a Python package is installed or not on Sapelo2
How to know a Python package is installed or not on Sapelo2


How to install a Python package in user's home directory on Sapelo2
How to install a Python package in user's home directory on Sapelo2
Title: '''Do It Yourself: Using Conda to create and run python environments to suit your computing needs effortlessly!'''
Focus: Use conda to create and configure your own python virtual environments; Activate your environments to run python apps from your home directory on Sapelo2
What is Conda and its environment
Conda on Sapelo2
Use conda to create and configure your own python virtual environments
Activate your environments to run python apps from your home directory on Sapelo2




Line 220: Line 408:
Focus: Overview of Linux common commands related to file and folder operations
Focus: Overview of Linux common commands related to file and folder operations


Overview of the storage enviornment of zcluster and Sapelo cluster at GACRC
Overview of the storage environment of zcluster and Sapelo cluster at GACRC


How to transfer data between local and GACRC storage
How to transfer data between local and GACRC storage
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Perl I/O
Perl I/O
-->


== Download==


Title: '''R Language Introduction'''
This section provides the slides that we use for our current workshops and material used for several of our past training events and presentations.
====Sapelo2 Cluster Training====


Presenter: Dr. James Monogan (Department of Political Science, University of Georgia)
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|[[Media:GACRC_Sapelo2_cluster_new_user_training_workshop_v10.8.pdf]]
|-
|}


Focus: Common general topics about R language
====Teaching Cluster Training====


Description:This short course will introduce users to the program R and how to use it for data analysis.
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:GACRC-Teaching-cluster-new-user-training-workshop-Spring2025.pdf]]
|-
|}


Topics covered in the 3 hour session will include data management, drawing graphs, and some basic statistics.
====Linux Training for New Cluster Users====


Please download a reference book suggested by the presenter ahead of time (free if downloaded on the university network) from: http://link.springer.com/book/10.1007/978-3-319-23446-5.
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:Linux_Training_For_New_Users_Of_Cluster_Suchi_04252019.pdf]]
|-
|}


====Installing Software Packages in Virtual Environments on Sapelo2====


==Download==
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:GACRC_virtual_environments_training_v1.1.pdf]]
|}


====Sapelo2 Cluster Training====
====Job Parallelization with GNU Parallel and Slurm Arrays====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
| [[media: GACRC Sapelo2 cluster new user training workshop v5.1.pdf]]
|-
|-
|[[Media:GNU_Parallel_and_SLURM_Arrays_v1.pdf]]
|}
|}


====Teaching Cluster Training====
====Python Basics====


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{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|[[Media:Python_Language_Basics_I_v5.1.pdf]]
|-
|-
| [[media: GACRC Teaching cluster new user training workshop ver2.pdf]]
|[[Media:Python_Language_Basics_II_v5.1.pdf]]
|-
|[[Media:Python_Basics_v6.1.pdf]]
|-
|-
|}
|}


====Linux Training for New Cluster Users====
====R Basics====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| [[media: Linux Training For New Users Of Cluster Suchi 02152019.pdf]]
|[[Media:R Language Basics PowerPoint v2.0.1.pdf|Media:R_Language_Basics_PowerPoint_v2.0.pdf]]
|-
|[[Media:R_Language_Basics_Document_v2.0.pdf]]
|-
|[[Media:R_Language_Basics_part_2_Powerpoint_v1.0.pdf]]
|-
|[[Media:R_Language_Basics_part_2_Document_v1.0.pdf]]
|-
|-
|}
|}


====Python Basics====
====Perl Basics====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
|-
| [[media: Python Language Basics I Workshop20160328 v4.pdf]]
| [[Media:Perl_Language_Basics_I_Workshop_v1.pdf]]
|-
| [[media: Python Language Basics II Workshop20160425 v1.pdf]]
|-
|-
|}
|}


====Perl Basics====
====Sap2test Migration Training====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
| [[media: Perl Language Basics I Workshop v1.pdf]]
|-
|-
|[[Media:Migrating_to_Slurm_and_new_software_environment.pdf]]
|}
|}
'''Please note:''' To help users familiarize with Slurm and the test cluster environment, we have prepared some training videos that are available from the '''GACRC's Kaltura channel''' at
https://kaltura.uga.edu/channel/GACRC/176125031 (login with MyID and password is required).


====Topical Sessions====
====Topical Sessions====


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{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|
|-
|-
| [[media: Submit and Run Jobs Efficiently and Correctly on Sapelo v1.pdf]]
|[[Media:AI_Resources_on_the_GACRC_Sapelo2_Cluster.pdf]]
|-
|-
| [[media: Python on GACRC Computing Resources v1.pdf]]
|[[Media:Using_Sapelo2_Cluster_at_the_GACRC_Part_II_Rocky8.pdf]]
|-
|-
| [[media: Introduction to GACRC Storage Environment Workshop20160427 v3.pdf]]
|[[Media:Using_Conda_on_the_GACRC_Sap2test_cluster_v1.pdf]]
|-
|-
| [[media: Blast Workshop GACRC 02012017.pdf]]
|[[Media:Blast_Workshop_GACRC_02012017.pdf]]
|-
|-
| [[media: Next-Generation Sequencing Applications at GACRC 10282016.pdf]]
|[[Media:Next-Generation_Sequencing_Applications_at_GACRC_10282016.pdf]]
|-
| [[media: Software installation on zcluster.pdf]]
|-
|-
|}
|}


====Out-Reach/On-Class Talk====
====Out-Reach/In-Class Talk====


{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable"
{| class="wikitable unsortable" width="100%" border="1" cellspacing="0" cellpadding="2" align="center"
|-
! scope="col" |Dept./Center/Institute
! scope="col" |Type
! scope="col" |Workshop PDF
|-
|BCMB8330 - Spring2025||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330-Spring2025.pdf]]
|-
|PHYS8602 - Spring2025||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-Spring2025.pdf]] ; [[Media:Gacrc_handout2025_phys8602.pdf]]
|-
|Engineering FYOS - Fall 2024|| In-Class||[[Media:GACRC_overview_20240920-FYOS.pdf]]
|-
|CSP seminar - Fall 2024||Out-Reach||[[Media:GACRC_overview_20240820-CSP.pdf]]
|-
|BCMB8330 - Spring2024||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330_Spring2024.pdf]]
|-
|PHYS4601/6601 - Spring2024|| In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601-Spring2024.pdf]] ; [[Media:Gacrc_handout2024_phys4601.pdf]]
|-
|PHYS8601 - Spring2024||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601-Spring2024.pdf]] ; [[Media:Gacrc_handout2024_phys8601.pdf]]
|-
|CSP seminar - Fall 2023||Out-Reach||[[Media:GACRC_overview_20230822-CSP.pdf]]
|-
|BCMB8330 - Spring2023||In-Class||[[Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330.pdf]]
|-
|PHYS4601/6601 - Spring2023||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] ; [[Media:Gacrc_handout2023_phys4601.pdf]]
|-
|PHYS8602 - Spring2023|| In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf]] ; [[Media:Gacrc_handout2023_phys8602.pdf]]
|-
|ILS GradFIRST course - Fall 2022||Out-Reach||[[Media:GACRC_overview_20220901-ILS.pdf]]
|-
|FYOS1001 - Fall 2022||Out-Reach||[[Media:High_Performance_Computing_(HPC)_on_GACRC_Sapelo2_Cluster.pdf]]
|-
|-
! scope="col" | Dept./Center/Institute
|CSP seminar - Fall 2022||Out-Reach||[[Media:GACRC_overview_20220830-CSP.pdf]]
! scope="col" | Type
! scope="col" | Workshop PDF
|-
|-
| The Center for Simulational Physics || On-Class (PHYS4601/6601) || [[media:GACRC Teaching cluster new user training workshop-phys4601.pdf]] [[media:Gacrc handout2019 phys4601.pdf]]
|CSP seminar - Fall 2022||Out-Reach||[[Media:Compile_and_Run_HPC_code_on_Sapelo2.pdf]]
|-
|-
| The Center for Simulational Physics || On-Class (PHYS8602) || [[media:GACRC Teaching cluster new user training workshop-phys8602.pdf]] [[media:Gacrc handout2019 phys8602.pdf]]
|Terry College IT - Spring2022||Out-Reach ||[[Media:GACRC_overview_20220506-Terry.pdf]]
|-
|-
| Food Science - Fall 2018 || On-Class (FYOS1001) || [[media:High Performance Computing (HPC) on Sapelo2 Cluster at GACRC.pdf]]
|PHYS8601 - Spring2022||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf]]
|-
|PHYS4601/6601 - Spring2022||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] ; [[Media:Gacrc_handout2021_phys4601.pdf]]
|-
|PHYS8602 - Spring2021 ||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-2021.pdf]] ; [[Media:Gacrc_handout2021_phys8602.pdf]]
|-
|GENE4220 - Fall2020||In-Class||[[Media:GACRC_Teaching_cluster_new_user_training_workshop_GENE4220_Fall2020.pdf]]
|-
|College of Veterinary Medicine - Spring2020||Out-Reach (jlslab)||[[Media:Using_GACRC_Sapelo2_Cluster-Advanced_Topics(1).pdf]]
|-
|Byod Data Center - Fall2019||In-Class (FYOS1001)||[[Media:High_Performance_Computing_(HPC)_on_Cluster.pdf]]
|-
|Department of Linguistics - Fall2019||In-class (LING6570)|| [[Media:GACRC_Teaching_cluster_new_user_training_workshop_LING6570_Part2.pdf]]
|-
|The Center for Simulational Physics - Fall2019||Out-Reach (Seminar Talk 20190820)||[[Media:Introduction_to_GACRC_Computing_Facility_-_Sapelo2_Cluster_CSP-Fall2019.pdf]]
|-
|The Center for Simulational Physics||In-Class (PHYS4601/6601)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf]] [[Media:Gacrc_handout2019_phys4601.pdf]]
|-
| The Center for Simulational Physics||In-Class (PHYS8601)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf]] [[Media:Gacrc_handout2020_phys8601.pdf]]
|-
|The Center for Simulational Physics||In-Class (PHYS8602)||[[Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf]] [[Media:Gacrc_handout2019_phys8602.pdf]]
|-
|Food Science - Fall2018||In-Class (FYOS1001)||[[Media:High_Performance_Computing_(HPC)_on_Sapelo2_Cluster_at_GACRC.pdf]]
|-  
|-  
| The Center for Simulational Physics - Summer 2018 || Out-Reach (CSP Seminar Talk 20180821) || [[media: Introduction to GACRC Sapelo2 cluster.pdf]]
|The Center for Simulational Physics - Summer2018||Out-Reach (Seminar Talk 20180821)||[[Media:Introduction_to_GACRC_Sapelo2_cluster.pdf]]
|-
|-
| Miller plant science - Summer 2018 || Out-Reach (jlmlab) || [[media: Introduction to GACRC Sapelo2 cluster.pdf]]
|Miller plant science - Summer2018||Out-Reach (jlmlab)||[[Media:Introduction_to_GACRC_Sapelo2_cluster.pdf]]
|-
|-
| Biochemistry and Molecular Biology - Spring 2018 || On-Class (BCMB8330) ||[[media: GACRC zcluster Class Training BCMB8330 Spring 2018.pdf]]
|Biochemistry and Molecular Biology - Spring2018||In-Class (BCMB8330)||[[Media:GACRC_zcluster_Class_Training_BCMB8330_Spring_2018.pdf]]
|-
|-
| The Center for Simulational Physics - Summer 2017 || Out-Reach (CSP Seminar Talk 20170831) || [[media: Introduction on HPC Resources at the GACRC.pdf]]
|The Center for Simulational Physics - Summer2017||Out-Reach (Seminar Talk 20170831)||[[Media:Introduction_on_HPC_Resources_at_the_GACRC.pdf]]
|-
|-
| Computational Physics - Spring 2017 || On-class (PHYS4601/6601) || [[media: phys4601.pdf]]
|Computational Physics - Spring2017 ||In-class (PHYS4601/6601)||[[Media:Phys4601.pdf]]
|-
|-
| Computational Physics - Spring 2017 || On-class (PHYS8602) || [[media: phys8602.pdf]]
|Computational Physics - Spring2017||In-class (PHYS8602)||[[Media:Phys8602.pdf]]
|-
|-
| The Institute of Bioinformatics and the Quantitative Biology Consulting Group || Out-Reach || [[media: Introduction to HPC Resources at GACRC BBB Talk 20151014.pdf]]
|The Institute of Bioinformatics and the Quantitative Biology Consulting Group||Out-Reach||[[Media:Introduction_to_HPC_Resources_at_GACRC_BBB_Talk_20151014.pdf]]
|-
|-
| The Center for Simulational Physics || Out-Reach (CSP Seminar Talk 20160906) || [[media: Introduction to Sapelo Computing Resources at GACRC Workshop20160906.pdf]]
|The Center for Simulational Physics||Out-Reach (Seminar Talk 20160906)||[[Media:Introduction_to_Sapelo_Computing_Resources_at_GACRC_Workshop20160906.pdf]]
|-
|-
| Microbiology || On-Class (MIBO8150) || [[media: Introduction to HPC Resources at GACRC MIBO8150 20160926.pdf]]
|Microbiology||In-Class (MIBO8150)||[[Media:Introduction_to_HPC_Resources_at_GACRC_MIBO8150_20160926.pdf]]
|-
|-
| Statistics || On-Class (STAT8060) || [[media: Introduction to HPC Using zcluster at GACRC Workshop STAT8060 20150826.pdf]]
|Statistics||In-Class (STAT8060)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_Workshop_STAT8060_20150826.pdf]]
|-
|-
| Biochemistry and Molecular Biology || On-Class (BCMB8211) || [[media: Introduction to HPC Using zcluster at GACRC BCMB8211 20160114.pdf]]
|Biochemistry and Molecular Biology||In-Class (BCMB8211)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BCMB8211_20160114.pdf]]
|-
|-
| Plant Biology || On-Class (PBIO/BINF8350) || [[media: Introduction to HPC Using zcluster at GACRC PBIO-BINF8350 20160115.pdf]]
|Plant Biology||In-Class (PBIO/BINF8350)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO-BINF8350_20160115.pdf]]
|-
|-
| Plant Biology - Bioinformatics Applications Fall 2016 || On-Class (PBIO4550) || [[media:Introduction to HPC Using zcluster at GACRC PBIO 4550 08182016.pdf]]
|Plant Biology - Bioinformatics Applications Fall2016||In-Class (PBIO4550)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO_4550_08182016.pdf]]
|-
|-
| Bioinformatics - Essential Computing Skills for Biologists Fall 2016 || On-Class (BINF4005) || [[media:Introduction to HPC Using zcluster at GACRC BINF 4005 08312016.pdf]]
|Bioinformatics - Essential Computing Skills for Biologists Fall2016||In-Class (BINF4005)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BINF_4005_08312016.pdf]]
|-
|-
| Computers in Experimental Genetics Fall 2016 || On-Class (GENE4220) || [[media:Introduction to HPC Using zcluster at GACRC GENE 4220 10192016.pdf]]
|Computers in Experimental Genetics Fall2016||In-Class (GENE4220)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_GENE_4220_10192016.pdf]]
|-
|-
| Statistics - Advanced Applications and Computing in R Fall 2016 || On-Class (STAT8330) || [[media: Introduction to HPC Using zcluster at GACRC STAT8330 11022016.pdf]]
|Statistics - Advanced Applications and Computing in R Fall2016||In-Class (STAT8330)||[[Media:Introduction_to_HPC_Using_zcluster_at_GACRC_STAT8330_11022016.pdf]]
|}
|}


'''NOTE:''' The slides may become outdated and you should always check GACRC Wiki for up to date information.
'''NOTE:''' The slides may become outdated and you should always check GACRC Wiki for up to date information.


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Latest revision as of 15:02, 14 May 2025

GACRC Training

The GACRC regularly hosts training sessions on a number of subjects relevant to the use of our computational and storage resources. Scheduled trainings will be announced through the GACRC mailing list.

NOTE: New users are required to attend a Sapelo2 cluster introductory training session and information about that will be sent once an account is requested.


Regular Training Announcement

In June 2025, the GACRC is hosting 9 training sessions listed below. These training workshops will be offered remotely via Zoom Meeting. Detailed instructions for joining the Zoom meeting will be sent to your UGA email account before each training session you register for.

We will offer:

1. Linux training for Linux-inexperienced cluster new users (3 sessions)

2. Sapelo2 cluster new user training (3 sessions)

3. Using Sapelo2 Cluster at the GACRC, Part II (1 session)

4. Installing Software Packages in Virtual Environments on Sapelo2 (1 session) NEW

5. Job Parallelization with GNU Parallel and SLURM Arrays (1 session) NEW

Event Schedule

This section describes the training workshops that we offer, along with the sessions that are currently scheduled.

Sapelo2 Cluster New User Training

This mandatory training consists of an overview of the structure of Sapelo2 as well as hands-on practice submitting a job along with guidance and best practices when using the Sapelo2 cluster.

Prerequisites:

  • Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.

Workshop Training Goals:

  • Understand the layout of Sapelo2
  • Understand the Sapelo2 file systems
  • Understand the Sapelo2 partitions
  • Understand the Sapelo2 software environment
  • Understand how to request computing resources and submit a computational batch job following the Sapelo2 cluster general workflow
  • Understand how to initiate an interactive job
  • Understand how to transfer files to and from the cluster
  • Understand how to get support from GACRC support team when you have any issues on cluster

Scheduled Sessions:

Title Date/Time
Using Sapelo2 Cluster at the GACRC May 15th, Thursday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC May 21st, Wednesday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 4th, Wednesday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 12th, Thursday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC June 20th, Friday, 2:00 PM - 4:00 PM


Linux Training for Linux-inexperienced Cluster New Users

The Sapelo2 High Performance Computing (HPC) cluster runs a headless Linux distribution as the operating system on each of its constituent nodes. The term headless refers to the fact that these nodes do not have a desktop graphical user interface (GUI) installed by default. Graphical desktop environments consume resources that analyses could otherwise use, so users employ a command-line interface (CLI) instead. To interact with these resources, users connect to a remote terminal via SSH and execute commands.

The Linux Training workshop provides hands-on practice of the fundamental Linux commands necessary to interact with HPC resources.

Prerequisite:

Please watch the introductory videos on Linux, basic Linux terms, and Linux Paths and Directories (total ~17 minutes) before attending the training workshop.

Training Goals:

1. Understand fundamental concepts of Linux working environment (filesystem hierarchy, path, PATH, etc.)

2. Know how to use Linux common commands (ls, cd, pwd, cat, more, nano, mkdir, rm, cp, mv, etc.)

3. Understand what is Linux bash shell and know how to make a simple Linux script and run it in Linux environment

Scheduled Sessions:

Title Date/Time
Use Linux on Cluster May 19th, Monday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 2nd, Monday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 10th, Tuesday, 1:00 PM - 3:00 PM
Use Linux on Cluster June 18th, Wednesday, 1:00 PM - 3:00 PM


Using Sapelo2 Cluster at the GACRC, Part II

This workshop will cover high-performance computing on Sapelo2, including job scheduling, resource requests (CPU, memory, GPU), and techniques for optimizing job performance.

Prerequisites:

  • Linux basics. A Linux-inexperienced user must complete a prerequisite Linux training for Linux-inexperienced cluster new users.
  • Sapelo2 cluster new user training. Fundamental HPC and Sapelo2 knowledge is required for this advanced Sapelo2 workshop.

Training Goals:

1. Learn about high-performance computing framework

2. Why is my job pending? How can I get my job to start sooner? How to find available computing resources on Sapelo2?

3. How to request computing resources such as nodes, CPU cores, memory, GPU device, etc. to run serial, threaded, MPI, and GPU jobs on Sapelo2?

4. How can I make my job run more efficiently (through the correct use of software and hardware)?

5. A quick intro to MPI library and how to compile/run MPI jobs on Sapelo2

Scheduled Sessions:

Title Date/Time
Using Sapelo2 Cluster at the GACRC, Part II May 16th, Friday, 2:00 PM - 4:00 PM
Using Sapelo2 Cluster at the GACRC, Part II June 27th, Friday, 2:00 PM - 4:00 PM


Installing Software Packages in Virtual Environments on Sapelo2

This workshop will cover the basics of virtual environments as well as provide practical guidance and best practices for using virtual environments on the Sapelo2 cluster. Participants will learn the basics of creating and configuring virtual environments, how to install software packages in both a Conda virtual environment and a Python virtual environment, and manage dependencies in their environments.

Prerequisite:

Must already have strong understanding of the Linux environment and Sapelo2.

Training Goals:

1. Learn how to create a virtual environment on Sapelo2

2. Be able to install software packages into both Conda and Python virtual environments

3. Understand how to manage dependencies of their virtual environments

Scheduled Sessions:

Title Date/Time
Installing Software Packages in Virtual Environments on Sapelo2 May 26th, Monday, 2:00 PM - 3:00 PM
Installing Software Packages in Virtual Environments on Sapelo2 June 17th, Tuesday, 2:00 PM - 3:00 PM


Job Parallelization with GNU Parallel and Slurm Arrays

Learn how to run multiple commands in parallel using GNU Parallel and Slurm Arrays. These tools greatly reduce the runtime of certain types of jobs by running multiple instances of the same command in parallel. The workshop focuses on problems that involve executing the same command on multiple different inputs. This workshop is intended for users comfortable writing job submission scripts and using a command line. Concurrent and parallel programming techniques are not covered in this workshop.

Prerequisite:

Must already have strong understanding of the Linux environment and Sapelo2.

Training Goals:

1. Understand which jobs benefit from GNU Parallel and Slurm Arrays

2. Use GNU Parallel and Slurm Arrays to parallelize jobs

3. Understand the differences and similarities between GNU Parallel and Slurm Arrays

Scheduled Sessions:

Title Date/Time
Job Parallelization with GNU Parallel and Slurm Arrays May 29th, Thursday, 1:00 PM - 2:30 PM
Job Parallelization with GNU Parallel and Slurm Arrays June 26th, Thursday, 1:00 PM - 2:30 PM


How to Register

The training workshops Using Sapelo2 Cluster at the GACRC and Use Linux on Cluster are ONLY offered to new users who need user accounts on the GACRC Sapelo2 cluster or current Sapelo2 users seeking a refresher. If you would like to use the cluster, please ask your group PI/UGA faculty member to send us an account creation request for you, using the User Account Request Form.

If you would like to attend the Using Sapelo2 Cluster at the GACRC, Part II, the Installing Software Packages in Virtual Environments on Sapelo2, and/or the Job Parallelization with GNU Parallel and Slurm Arrays training workshops, please send us a request using the GACRC Training Request Form. In your request, please tell us which session(s) you would like to attend.


Download

This section provides the slides that we use for our current workshops and material used for several of our past training events and presentations.

Sapelo2 Cluster Training

Media:GACRC_Sapelo2_cluster_new_user_training_workshop_v10.8.pdf

Teaching Cluster Training

Media:GACRC-Teaching-cluster-new-user-training-workshop-Spring2025.pdf

Linux Training for New Cluster Users

Media:Linux_Training_For_New_Users_Of_Cluster_Suchi_04252019.pdf

Installing Software Packages in Virtual Environments on Sapelo2

Media:GACRC_virtual_environments_training_v1.1.pdf

Job Parallelization with GNU Parallel and Slurm Arrays

Media:GNU_Parallel_and_SLURM_Arrays_v1.pdf

Python Basics

Media:Python_Language_Basics_I_v5.1.pdf
Media:Python_Language_Basics_II_v5.1.pdf
Media:Python_Basics_v6.1.pdf

R Basics

Media:R_Language_Basics_PowerPoint_v2.0.pdf
Media:R_Language_Basics_Document_v2.0.pdf
Media:R_Language_Basics_part_2_Powerpoint_v1.0.pdf
Media:R_Language_Basics_part_2_Document_v1.0.pdf

Perl Basics

Media:Perl_Language_Basics_I_Workshop_v1.pdf

Sap2test Migration Training

Media:Migrating_to_Slurm_and_new_software_environment.pdf

Please note: To help users familiarize with Slurm and the test cluster environment, we have prepared some training videos that are available from the GACRC's Kaltura channel at https://kaltura.uga.edu/channel/GACRC/176125031 (login with MyID and password is required).

Topical Sessions

Media:AI_Resources_on_the_GACRC_Sapelo2_Cluster.pdf
Media:Using_Sapelo2_Cluster_at_the_GACRC_Part_II_Rocky8.pdf
Media:Using_Conda_on_the_GACRC_Sap2test_cluster_v1.pdf
Media:Blast_Workshop_GACRC_02012017.pdf
Media:Next-Generation_Sequencing_Applications_at_GACRC_10282016.pdf

Out-Reach/In-Class Talk

Dept./Center/Institute Type Workshop PDF
BCMB8330 - Spring2025 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330-Spring2025.pdf
PHYS8602 - Spring2025 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-Spring2025.pdf ; Media:Gacrc_handout2025_phys8602.pdf
Engineering FYOS - Fall 2024 In-Class Media:GACRC_overview_20240920-FYOS.pdf
CSP seminar - Fall 2024 Out-Reach Media:GACRC_overview_20240820-CSP.pdf
BCMB8330 - Spring2024 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330_Spring2024.pdf
PHYS4601/6601 - Spring2024 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601-Spring2024.pdf ; Media:Gacrc_handout2024_phys4601.pdf
PHYS8601 - Spring2024 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601-Spring2024.pdf ; Media:Gacrc_handout2024_phys8601.pdf
CSP seminar - Fall 2023 Out-Reach Media:GACRC_overview_20230822-CSP.pdf
BCMB8330 - Spring2023 In-Class Media:GACRC-Teaching-cluster-new-user-training-workshop_bcmb8330.pdf
PHYS4601/6601 - Spring2023 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf ; Media:Gacrc_handout2023_phys4601.pdf
PHYS8602 - Spring2023 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf ; Media:Gacrc_handout2023_phys8602.pdf
ILS GradFIRST course - Fall 2022 Out-Reach Media:GACRC_overview_20220901-ILS.pdf
FYOS1001 - Fall 2022 Out-Reach Media:High_Performance_Computing_(HPC)_on_GACRC_Sapelo2_Cluster.pdf
CSP seminar - Fall 2022 Out-Reach Media:GACRC_overview_20220830-CSP.pdf
CSP seminar - Fall 2022 Out-Reach Media:Compile_and_Run_HPC_code_on_Sapelo2.pdf
Terry College IT - Spring2022 Out-Reach Media:GACRC_overview_20220506-Terry.pdf
PHYS8601 - Spring2022 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf
PHYS4601/6601 - Spring2022 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf ; Media:Gacrc_handout2021_phys4601.pdf
PHYS8602 - Spring2021 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602-2021.pdf ; Media:Gacrc_handout2021_phys8602.pdf
GENE4220 - Fall2020 In-Class Media:GACRC_Teaching_cluster_new_user_training_workshop_GENE4220_Fall2020.pdf
College of Veterinary Medicine - Spring2020 Out-Reach (jlslab) Media:Using_GACRC_Sapelo2_Cluster-Advanced_Topics(1).pdf
Byod Data Center - Fall2019 In-Class (FYOS1001) Media:High_Performance_Computing_(HPC)_on_Cluster.pdf
Department of Linguistics - Fall2019 In-class (LING6570) Media:GACRC_Teaching_cluster_new_user_training_workshop_LING6570_Part2.pdf
The Center for Simulational Physics - Fall2019 Out-Reach (Seminar Talk 20190820) Media:Introduction_to_GACRC_Computing_Facility_-_Sapelo2_Cluster_CSP-Fall2019.pdf
The Center for Simulational Physics In-Class (PHYS4601/6601) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys4601.pdf Media:Gacrc_handout2019_phys4601.pdf
The Center for Simulational Physics In-Class (PHYS8601) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8601.pdf Media:Gacrc_handout2020_phys8601.pdf
The Center for Simulational Physics In-Class (PHYS8602) Media:GACRC_Teaching_cluster_new_user_training_workshop-phys8602.pdf Media:Gacrc_handout2019_phys8602.pdf
Food Science - Fall2018 In-Class (FYOS1001) Media:High_Performance_Computing_(HPC)_on_Sapelo2_Cluster_at_GACRC.pdf
The Center for Simulational Physics - Summer2018 Out-Reach (Seminar Talk 20180821) Media:Introduction_to_GACRC_Sapelo2_cluster.pdf
Miller plant science - Summer2018 Out-Reach (jlmlab) Media:Introduction_to_GACRC_Sapelo2_cluster.pdf
Biochemistry and Molecular Biology - Spring2018 In-Class (BCMB8330) Media:GACRC_zcluster_Class_Training_BCMB8330_Spring_2018.pdf
The Center for Simulational Physics - Summer2017 Out-Reach (Seminar Talk 20170831) Media:Introduction_on_HPC_Resources_at_the_GACRC.pdf
Computational Physics - Spring2017 In-class (PHYS4601/6601) Media:Phys4601.pdf
Computational Physics - Spring2017 In-class (PHYS8602) Media:Phys8602.pdf
The Institute of Bioinformatics and the Quantitative Biology Consulting Group Out-Reach Media:Introduction_to_HPC_Resources_at_GACRC_BBB_Talk_20151014.pdf
The Center for Simulational Physics Out-Reach (Seminar Talk 20160906) Media:Introduction_to_Sapelo_Computing_Resources_at_GACRC_Workshop20160906.pdf
Microbiology In-Class (MIBO8150) Media:Introduction_to_HPC_Resources_at_GACRC_MIBO8150_20160926.pdf
Statistics In-Class (STAT8060) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_Workshop_STAT8060_20150826.pdf
Biochemistry and Molecular Biology In-Class (BCMB8211) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BCMB8211_20160114.pdf
Plant Biology In-Class (PBIO/BINF8350) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO-BINF8350_20160115.pdf
Plant Biology - Bioinformatics Applications Fall2016 In-Class (PBIO4550) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_PBIO_4550_08182016.pdf
Bioinformatics - Essential Computing Skills for Biologists Fall2016 In-Class (BINF4005) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_BINF_4005_08312016.pdf
Computers in Experimental Genetics Fall2016 In-Class (GENE4220) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_GENE_4220_10192016.pdf
Statistics - Advanced Applications and Computing in R Fall2016 In-Class (STAT8330) Media:Introduction_to_HPC_Using_zcluster_at_GACRC_STAT8330_11022016.pdf

NOTE: The slides may become outdated and you should always check GACRC Wiki for up to date information.


Retrieved from "https://wiki.gacrc.uga.edu/index.php?title=Training&oldid=22391"