NCBI Fasta-Sapelo2: Difference between revisions
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(Clarified that NCBI is ending FASTA availability and that we are no longer updating this.) |
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Latest revision as of 15:15, 2 August 2024
As of April, 2024, the NCBI is discontinuing FASTA availability from the BLAST database; the ability to generate FASTA-formatted files from BLAST database files is retained via the blastdbcmd function of BLAST+. etc.
Each fasta is located at the directory with the name pattern of either /db/ncbi/fasta/MMDDYYYY (e.g., /db/ncbi/fasta/09192019) or /db/ncbi/fasta/YYYYMMDD (e.g., /db/ncbi/fasta/20220401, which incidentally, is the last fully deployed version we have).
The following databases are available:
nr nt pdbaa swissprot
Data source: NCBI Fasta FTP