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Combined display of all available logs of Research Computing Center Wiki. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

• 16:20, 12 March 2025 Chelsea talk contribs uploaded File:Load new condakernel.png
• 16:20, 12 March 2025 Chelsea talk contribs created page File:Load new condakernel.png
• 16:19, 12 March 2025 Chelsea talk contribs uploaded a new version of File:New-jupyter-interface.png
• 16:18, 12 March 2025 Chelsea talk contribs uploaded a new version of File:Load new pythonkernel.png
• 16:17, 12 March 2025 Chelsea talk contribs uploaded a new version of File:Load pythonkernel.png
• 16:09, 12 March 2025 Chelsea talk contribs uploaded File:Load pythonkernel.png
• 16:09, 12 March 2025 Chelsea talk contribs created page File:Load pythonkernel.png
• 16:08, 12 March 2025 Chelsea talk contribs uploaded File:Load new pythonkernel.png
• 16:08, 12 March 2025 Chelsea talk contribs created page File:Load new pythonkernel.png
• 16:07, 12 March 2025 Chelsea talk contribs uploaded File:New-jupyter-interface.png
• 16:07, 12 March 2025 Chelsea talk contribs created page File:New-jupyter-interface.png
• 15:51, 12 March 2025 Chelsea talk contribs created page Using a Python environment in Jupyter (Created page with "== Python environment == A Python environment is a type of virtual environment. Python environments are used to contain a set of software/packages that you install (via pip) into that environment that may be accessed any time you activate the environment. To learn more about Python environments, please see our wiki page on creating Python environments '''here.''' == Open OnDemand == Open OnDemand is a...") Tag: Visual edit: Switched
• 16:17, 19 February 2025 Chelsea talk contribs uploaded File:GACRC virtual environments training v1.1.pdf
• 16:17, 19 February 2025 Chelsea talk contribs created page File:GACRC virtual environments training v1.1.pdf
• 15:27, 30 July 2024 Chelsea talk contribs created page Trinity-HpcGridRunner (Created page with " ===Description=== Instruction on how to modify a Trinity script to run in conjunction with HpcGridRunner ===Running Program=== Step 1: Create normal Trinity script * Note: normal Trinity jobs should be run utilizing /lscratch, however, this method running with HpcGridRunner does not benefit from /lscratch so this example will not have any /lscratch components in it. For more information on running normal Trinity jobs with /lscratch, please see Trinity-Sapelo2#Utilizi...") Tag: Visual edit
• 12:24, 14 May 2024 Chelsea talk contribs created page IQ-Tree-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 1.6.12, 2.2.2.6 ===Author / Distributor=== Please see http://www.iqtree.org/ ===Description=== Efficient phylogenomic software by maximum likelihood. More information: http://www.iqtree.org/ === Running Program === *Version 2.2.2.6, installed in /apps/eb/IQ-TREE/2.2.2.6-gompi-2022a To use this version of IQ-TREE,...")
• 12:22, 14 May 2024 Chelsea talk contribs created page HISAT2-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.1, 3 === Author / Distributor === [https://ccb.jhu.edu/software/hisat2/index.shtml HISAT2] === Description === "HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome)." More...")
• 12:15, 14 May 2024 Chelsea talk contribs created page EIGENSOFT-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 7.2.1 ===Author / Distributor=== [https://www.hsph.harvard.edu/alkes-price/software/ EIGENSOFT] ===Description=== The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006). The EIGENSTRAT method use...")
• 12:14, 14 May 2024 Chelsea talk contribs created page Cytoscape-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 3.9.1 === Author / Distributor === Please see https://cytoscape.org/ === Description === "Cytoscape is an open source software tool for integrating, visualizing, and analyzing data in the context of networks." more details at [http://www.cytoscape.org/documentation_users.html CytoScape] === Running Program ===...")
• 11:36, 14 May 2024 Chelsea talk contribs created page Bowtie2-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.4.1, 2.4.4, 2.4.5, 2.5.2 === Author / Distributor === [http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Bowtie2] === Description === "Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or...")
• 11:32, 14 May 2024 Chelsea talk contribs created page BLAST-Sapelo2 (Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.26 === Author / Distributor === [http://blast.ncbi.nlm.nih.gov/ BLAST] === Description === "Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences." More details...")
• 13:36, 12 April 2024 Chelsea talk contribs uploaded File:Jupyter-20240412.png
• 13:36, 12 April 2024 Chelsea talk contribs created page File:Jupyter-20240412.png
• 15:21, 5 January 2024 Chelsea talk contribs uploaded File:Vscode-password.png
• 15:21, 5 January 2024 Chelsea talk contribs created page File:Vscode-password.png
• 15:13, 5 January 2024 Chelsea talk contribs uploaded File:Vscode-connect.png
• 15:13, 5 January 2024 Chelsea talk contribs created page File:Vscode-connect.png
• 09:42, 3 January 2024 Chelsea talk contribs uploaded a new version of File:Vscode-setup1.png
• 09:41, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-setup1.png
• 09:41, 3 January 2024 Chelsea talk contribs created page File:Vscode-setup1.png
• 09:27, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-extension.png
• 09:27, 3 January 2024 Chelsea talk contribs created page File:Vscode-extension.png
• 09:27, 3 January 2024 Chelsea talk contribs uploaded File:Vscode-menu.png
• 09:27, 3 January 2024 Chelsea talk contribs created page File:Vscode-menu.png
• 14:29, 19 December 2023 Chelsea talk contribs uploaded File:Vscode resources.png
• 14:29, 19 December 2023 Chelsea talk contribs created page File:Vscode resources.png
• 14:29, 19 December 2023 Chelsea talk contribs uploaded File:Start vscode.png
• 14:29, 19 December 2023 Chelsea talk contribs created page File:Start vscode.png
• 10:58, 19 December 2023 Chelsea talk contribs created page VSCODE (Created page with " == Open OnDemand == Open OnDemand is a web-based service that allows users to run software with a graphical user interface (GUI) such as Jupyter Notebook. Please see our wiki...") Tag: Visual edit
• 14:07, 18 December 2023 Chelsea talk contribs uploaded File:Load condakernel.png
• 14:07, 18 December 2023 Chelsea talk contribs created page File:Load condakernel.png
• 14:07, 18 December 2023 Chelsea talk contribs uploaded File:Jupyter ood modules.png
• 14:07, 18 December 2023 Chelsea talk contribs created page File:Jupyter ood modules.png
• 17:50, 15 December 2023 Chelsea talk contribs uploaded File:Screenshot 2023-12-13 at 10.25.00 AM.png
• 17:50, 15 December 2023 Chelsea talk contribs created page File:Screenshot 2023-12-13 at 10.25.00 AM.png
• 10:37, 12 December 2023 Chelsea talk contribs created page Using a Conda environment in Jupyter (Created page with "== Conda environment == A Conda environment is a type of virtual environment. Conda environments are used to contain a set of software that you install (via Conda) into that e...")
• 13:07, 28 August 2023 Chelsea talk contribs uploaded File:GACRC Sapelo2 cluster new user training workshop v10.8.pdf
• 13:07, 28 August 2023 Chelsea talk contribs created page File:GACRC Sapelo2 cluster new user training workshop v10.8.pdf