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Show new changes starting from 16:26, 15 May 2024

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14 May 2024

12:49

BLAST+-Sapelo2‎ diffhist 0‎ Shtsai talk contribs

N 12:24

IQ-Tree-Sapelo2‎ diffhist +17,183‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 1.6.12, 2.2.2.6 ===Author / Distributor=== Please see http://www.iqtree.org/ ===Description=== Efficient phylogenomic software by maximum likelihood. More information: http://www.iqtree.org/ === Running Program === *Version 2.2.2.6, installed in /apps/eb/IQ-TREE/2.2.2.6-gompi-2022a To use this version of IQ-TREE,...")

			12:23		Software‎‎ 10 changes history +42‎ [Chelsea‎ (10×)]
					12:23 (cur \| prev) −16‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					12:21 (cur \| prev) −5‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					12:14 (cur \| prev) −12‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					12:13 (cur \| prev) −12‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					11:33 (cur \| prev) −5‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					11:32 (cur \| prev) −5‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					11:12 (cur \| prev) +25‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					11:10 (cur \| prev) +10‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					09:42 (cur \| prev) +19‎ Chelsea talk contribs (→‎Partial List of Installed Software)
					08:37 (cur \| prev) +43‎ Chelsea talk contribs (→‎Partial List of Installed Software)

N 12:22

HISAT2-Sapelo2‎ diffhist +11,848‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.1, 3 === Author / Distributor === [https://ccb.jhu.edu/software/hisat2/index.shtml HISAT2] === Description === "HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome)." More...")

N 12:15

EIGENSOFT-Sapelo2‎ diffhist +2,566‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 7.2.1 ===Author / Distributor=== [https://www.hsph.harvard.edu/alkes-price/software/ EIGENSOFT] ===Description=== The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006). The EIGENSTRAT method use...")

N 12:14

Cytoscape-Sapelo2‎ diffhist +2,987‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 3.9.1 === Author / Distributor === Please see https://cytoscape.org/ === Description === "Cytoscape is an open source software tool for integrating, visualizing, and analyzing data in the context of networks." more details at [http://www.cytoscape.org/documentation_users.html CytoScape] === Running Program ===...")

			N 11:37		Bowtie2-Sapelo2‎‎ 2 changes history +10,697‎ [Chelsea‎ (2×)]
					11:37 (cur \| prev) −309‎ Chelsea talk contribs (→‎Running Program) Tag: Visual edit
			N		11:36 (cur \| prev) +11,006‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.4.1, 2.4.4, 2.4.5, 2.5.2 === Author / Distributor === [http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Bowtie2] === Description === "Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or...")

N 11:32

BLAST-Sapelo2‎ diffhist +7,183‎ Chelsea talk contribs (Created page with "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.26 === Author / Distributor === [http://blast.ncbi.nlm.nih.gov/ BLAST] === Description === "Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences." More details...")