All public logs

Combined display of all available logs of Research Computing Center Wiki. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

15:29, 23 March 2026 Shtsai talk contribs deleted page Xcluster Go-Live (content was: "=== Go-live requirements === * KB:June12_xcluster_meeting ===Name the cluster!!=== *Win a free hot-apple pie ===(Scyld) Development Environment=== * KB:Installing scyldev ''(OS and Scyld)'' * KB:Scyldev compute nodes *Paul's VM plus physical nodes *Intel vs. AMD software builds? ===Software=== Intel Compiler - Guy checking on getting it. Apps to install on xclust...", and the only contributor was "Derda" (talk))
15:29, 23 March 2026 Shtsai talk contribs deleted page Student Accounts (content was: "====Creating Accounts==== I copied the below refenced file to: /home/student/make_account.notes - GD 07/15/2013 From Yecheng, 07/15/2013: mkdir -p /home/student/binf6005 chown arnold:student binf6005 mkdir -p /home/student/gene4220 chown arnold:student gene4220 perl /usr/local/acct/delta/createStudentPwd.pl -s 1 -e 30 -p /home/student/binf6005 >&1 | tee binf6005.log perl /usr/local/acct/delta/createStudentPwd.pl -s 35 -e 55 -p /home/student/gene4220 >&1 | tee gene4220....")
14:02, 23 March 2026 Shtsai talk contribs deleted page Running Jobs on pcluster (content was: "Category:Pcluster ===Using the Batch Queues=== Jobs of over ten (10) minutes duration must be submitted to the queues rather than run in the background or interactively on the login node pcluster.rcc.uga.edu. Background jobs and interactive commands including cron jobs, at, $ and nohup processes as well as commands entered at the keyboard will be terminated after 10 minutes...", and the only contributor was "Shtsai" (talk))
14:01, 23 March 2026 Shtsai talk contribs deleted page SCluster (content was: "https://twiki.grid.iu.edu/bin/view/ReleaseDocumentation/WorkerNodeClient http://www.math.tamu.edu/osg/ http://docs.uabgrid.uab.edu/suragrid/Grid_User_Management_System_(GUMS) SCluster Account and Certificate Information")
14:01, 23 March 2026 Shtsai talk contribs deleted page GGF Storage Needs (content was: "Need to discuss the possibility of a shared storage device that would be mounted at GGF, and on zcluster (for zcluster users who get files from GGF). The goal is to limit copies over the net.", and the only contributor was "Derda" (talk))
14:00, 23 March 2026 Shtsai talk contribs deleted page Ongoing issues (content before blanking was: "# File Vanishing Problem: #: User zheng has seen a file vanish right after saving it in vi. I don't know which node he was on. #: pbrunk saw this happen with vi on zcluster. #: yhuang has seen it as yhuang on zluster, and root on rcluster's c9-1(!). #: It's possible that clock skew contributed to this, but not certain. # node config drift away from baseline: #: nodes that are down or unresponsive can't execute 'pdsh'd commands. So once those nodes are back in...")
14:00, 23 March 2026 Shtsai talk contribs deleted page New Project List (content was: "{| class="wikitable" |+'''Projects''' |- |'''Name''' |'''Owners''' |'''Status''' |- |+'''Grid Engine''' | | |- |+'''Queue Configs''' | | |- |+'''/Home''' | | |- |+'''/Escratch''' | | |- |+'''Policy Enforcement''' | | |- |+'''Rackable Decommission''' | | |- |+'''Mathematica''' | | |- |+'''Equipment Spreadsheet''' | | |- |+'''Big-Memory-Node Nazi''' | | |- |+'''Monitoring...", and the only contributor was "Gcormier" (talk))
14:00, 23 March 2026 Shtsai talk contribs deleted page Ncbiblast (content was: " == NCBI Blast == === Category: Bioinformatics === === Program on === zcluster === Version === 2.2.26 is the last updated. older versions are also available. === Author / Distributor === [http://www.ncbi.nlm.nih.gov NCBI] === Description === BLAST (Basic Local Alignment Search Tool) === Running Program === Also refer to submit jobs to queues blast+ is d...", and the only contributor was "Yhuang" (talk))
14:00, 23 March 2026 Shtsai talk contribs deleted page NAS (content was: "Panasas", and the only contributor was "Jerky" (talk))
13:59, 23 March 2026 Shtsai talk contribs deleted page Inactive Users (content was: "There are 185 users who have not accessed systems in > 365 days. Need to archive them. Greg has list, and Paul will script the process. Old data will go to thumper2 * Paul archived these user home dirs on thumper2, done 6/29/13. * Paul removed their passwd/shadow/group entries, done 9/22/13.")
13:59, 23 March 2026 Shtsai talk contribs deleted page Inactive Labs (content was: "Paul scripted the wiping of the inactive-lab user data and this project is completed. The users affected are listed at the bottom.... 07/01/13 GD Inactive labs, as identified by Guy as those not using the GACRC for > 365 days. Greg's note to rccstaff concerning the archiving of the data is below. Remaining need is to wipe the lab members and group names from the following /etc...", and the only contributor was "Derda" (talk))
13:59, 23 March 2026 Shtsai talk contribs deleted page Index.php (content was: "GACRC")
13:59, 23 March 2026 Shtsai talk contribs deleted page Minutes from 12/10/2013 (content was: "''' December 10th, 2013 at 12pm in Room 628 Boyd ''' Agenda for 12/10/2013 Members Present: Jonathan Amster, Jonathan Arnold, Peter Kner, Margie Lee, Jim Leebens-Mack, David Saltz, and Richard Watson Members Absent: Martha Carr, and Yiping Zhao Ex-Officio Members Present: Jessie Kissinger, Thiab Taha, Bob Scott, and Guy Cormier * The minutes of the December...", and the only contributor was "Peter Kner" (talk))
13:58, 23 March 2026 Shtsai talk contribs deleted page Gaussian Users (content was: "Current list of pcluster Gaussian03 users. These users were contacted and asked to sign a Confidentially Agreement to use Gaussian09 on the zcluster: GD 3/17/14 NOTE: there is a mail alias on mail.rcc named gaussian_users with these users in it; GD '''(CA)''' means a Confidentially Agreement form has been received: GD 3/19/14 *Rob Woods and his group: '''(CA)''' **Lachele Foley...", and the only contributor was "Derda" (talk))
13:52, 23 March 2026 Shtsai talk contribs deleted page GACRCSupport (content was: "This is a test from created by YH Test for replacing support form at GACRC website {{#widget:Iframe |url=http://help.gacrc.uga.edu/ |width=410 |height=342 |border=0 }}", and the only contributor was "Yhuang" (talk))
13:52, 23 March 2026 Shtsai talk contribs deleted page HPC Center Links (content was: "===Guy's Links - perhaps a subset of the CASC list?=== {| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable sortable" |- ! scope="col" | Site ! scope="col" | URL |- |- |CASC Collaborators || http://computation.llnl.gov/casc/collaborators.php |- |Alaska||http://www.arsc.edu/arsc/ |- |Arizona||http://rc.arizona.edu/ |- |Arizona||http://a2c2.asu....", and the only contributor was "Derda" (talk))
13:52, 23 March 2026 Shtsai talk contribs deleted page EuPathDB renewal (content was: "EuPathDB is about to be submitting a proposal for renewal. they are still waiting for NIH to tell them if they can purchase or if they need to lease a service. they want to add to their current ionfrastructure a storage environemnt of 50TB at a minimum. they will now be subjected to FISMA moderate level", and the only contributor was "Gcormier" (talk))
13:51, 23 March 2026 Shtsai talk contribs deleted page Equalogic Backup Drive (content was: " ====Is this project complete? GD /7/31==== === Objective === Leverage the Burke Lab iSCSI device to add to and assist with the migration of the GACRC SAN from 10.0.0.0/8 IP addresses to 192.168.0.0/16 IP addresses. This needs to happen because the SAN VLAN is unable to be monitored. A monitoring node cannot have interfaces on separate networks with the same IP addresses and the 10.0.0.0/8 network is already used on the internodal network (VLAN 40). === Completed === * Remove...")
13:51, 23 March 2026 Shtsai talk contribs deleted page Dropbox (content was: "=Project Status= One of the next steps is a discussion of possible data transfer scenarios. =Questions and Concerns= *What is the maximum file size supported for transfer? *Is there an issue when large numbers of files must be kept up with? *Do we want a Dropbox style service or an FTP style service? Or do we need both... *How well does the solution handle file permissions, especially group permissions? *Do we want to survey the users to see what features are most important t...")
13:50, 23 March 2026 Shtsai talk contribs deleted page Past Sessions in 2020 (content was: " {| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Title ! scope="col" | Date/Time |- | Using Sapelo2 Cluster at the GACRC || April 28, Tuesday, 10 AM - 12:30 PM |- | Using Sapelo2 Cluster at the GACRC || May 6, Wednesday, 10 AM - 12:30 PM |- | Using Sapelo2 Cluster at the GACRC || May 15, Friday, 10 AM - 12:3...", and the only contributor was "Moses" (talk))
13:50, 23 March 2026 Shtsai talk contribs deleted page Minutes from 12/03/2013 (content was: "''' December third, 2013 at 10am in Room N104 Coverdell ''' Agenda for 12/03/2013 Members Present: Jonathan Amster, Jonathan Arnold, Martha Carr, Peter Kner, Jim Leebens-Mack, and David Saltz Members Absent: Margie Lee, Richard Watson, and Yiping Zhao Ex-Officio Members Present: Jessie Kissinger, Thiab Taha, Nick Berente, Michael Lucas, Bob Scott, and Guy Corm...", and the only contributor was "Peter Kner" (talk))
13:49, 23 March 2026 Shtsai talk contribs deleted page Microscopy Storage (content was: "From Guy - links to microscopy storage issue *http://bmc.uga.edu/ *http://microscopy.duke.edu/server/index.html", and the only contributor was "Derda" (talk))
13:49, 23 March 2026 Shtsai talk contribs deleted page Past Training Sessions in 2015 (content was: "{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Presentation Date/Time ! scope="col" | Location ! scope="col" | Title |- | October 26th, 2015, Monday, 2:00 PM - 3:30 PM || Davison Life Sciences Complex C128 || Introduction to Batch Process Jobs on Linux (Basic Linux knowledge required) |- | October 23rd, 20...", and the only contributor was "Moses" (talk))
13:49, 23 March 2026 Shtsai talk contribs deleted page Past Sessions in 2019 (content was: "===Sapelo2 Cluster New User Training=== {| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Title ! scope="col" | Date/Time |- | Using Sapelo2 Cluster at the GACRC || January 15th, Tuesday, 1:45 PM - 3:30 PM |- | Using Sapelo2 Cluster at the GACRC || January 28th, Monday, 1:00 PM - 3:00 PM |- | Using Sapelo2 Cl...", and the only contributor was "Moses" (talk))
13:49, 23 March 2026 Shtsai talk contribs deleted page Past Sessions in 2017 (content was: " ====Sapelo and zcluster New User Training==== {| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Title ! scope="col" | Date/Time |- | Introduction to HPC Using Sapelo Cluster at GACRC || January 9th, Monday, 1:00 PM - 2:30 PM |- | Introduction to HPC Using zcluster at GACRC || January 11th, Wednesday, 2:30 PM - 4:00 PM |- | Introduction to HPC Using Sapelo Cluster at GACRC || January 18th, Wednesday, 2:3...")
13:48, 23 March 2026 Shtsai talk contribs deleted page Past Sessions in 2016 (content was: " ====Sapelo and zcluster New User Training==== {| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Title ! scope="col" | Date/Time |- | Introduction to HPC Using the New Cluster at GACRC || January 6th, Wednesday, 3:00 PM - 4:30 PM |- | Introduction to HPC Using zcluster at GACRC || January 11th, Monday, 10:0...", and the only contributor was "Moses" (talk))
14:05, 20 March 2026 Shtsai talk contribs deleted page Past Sessions in 2015 (content was: "{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Presentation Date/Time ! scope="col" | Location ! scope="col" | Title |- | December 18th, 2015, Friday, 10:00 AM - 11:30 AM || Davison Life Sciences Complex C128 || Introduction to HPC Using zcluster at GACRC |- | December 14th, 2015, Monday, 2:00 PM - 3:30 PM...", and the only contributor was "Moses" (talk))
14:04, 20 March 2026 Shtsai talk contribs deleted page Pass Sessions in 2021 (content was: "{| width="100%" border="1" cellspacing="0" cellpadding="2" align="center" class="wikitable unsortable" |- ! scope="col" | Title ! scope="col" | Date/Time |- | Using Sapelo2 Cluster at the GACRC || January 8, Friday, 10:00 AM - 12:30 PM |- | Using Sapelo2 Cluster at the GACRC || January 13, Wednesday, 10:00 AM - 12:30 PM |- | Using Sapelo2 Cluster at the GACRC || January 22, Friday...", and the only contributor was "Moses" (talk))
09:45, 17 March 2026 Shtsai talk contribs deleted page NCO-Teaching (content was: "Category:Teaching Category:Software Category:Other === Category === Other === Program On === Teaching === Version === 4.7.4 ===Author / Distributor=== Please see http://nco.sourceforge.net/#People ===Description=== From http://nco.sourceforge.net/: "The NCO toolkit manipulates and analyzes data stored in netCDF-accessible formats, including DAP, HDF4, and HDF5." ==...", and the only contributor was "Moses" (talk))
09:44, 17 March 2026 Shtsai talk contribs deleted page NWCHEM-pcluster (content was: "Category:Pcluster === Category === Chemistry === Program On === pcluster === Version === 4.7 === Author / Distributor === Developed by the Molecular Sciences Software group of the Environmental Molecular Sciences Laboratory (EMSL) at the Pacific Northwest National Laboratory (PNNL). === Description === Developed by the Molecular Sciences Software group of the...", and the only contributor was "Shtsai" (talk))
09:44, 17 March 2026 Shtsai talk contribs deleted page NCL-Teaching (content was: "Category:Teaching Category:Software Category:Other === Category === Other === Program On === Teaching === Version === 6.4.0, 6.5.0 ===Author / Distributor=== Please see https://www.ncl.ucar.edu/ When citing NCL, please use the following: The NCAR Command Language (Version 6.5.0) [Software]. (2018). Boulder, Colorado: UCAR/NCAR/CISL/TDD. http://dx.doi.org/10.5065/D6...", and the only contributor was "Moses" (talk))
09:43, 17 March 2026 Shtsai talk contribs deleted page NETCDF-pcluster (content was: "Category:Pcluster === Category === Library === Program On === pcluster === Version === 3.5.1, 3.6.2 === Author / Distributor === See http://www.unidata.ucar.edu/software/netcdf/ === Description === NetCDF (network Common Data Form) is an interface for array-oriented data access and a library that provides an implementation of the interface. The netCDF library also defines a machine-independent format for representing scientific data. Together, the interface,...")
09:43, 17 March 2026 Shtsai talk contribs deleted page R-pcluster (content was: "Category:Pcluster === Category === Statistics === Program On === pcluster === Version === 1.9.1, 2.1.1 === Author / Distributor === See http://www.r-project.org/ === Description === R is a language and environment for statistical computing and graphics. It provides a wide variety of statistical (linear and nonlinear modeling, classical statistical tests, time-series analysis, classification, clustering, ...) and graphical techniques. === Running Program ===...")
09:39, 17 March 2026 Shtsai talk contribs deleted page Maple-pcluster (content was: "Category:Pcluster === Category === Other, Programming, Graphics === Program On === pcluster === Version === 10.06 === Author / Distributor === MapleSoft (see http://www.maplesoft.com) === Description === Maple is a mathematics software tool, which provides a mathematical computation engine with fully integrated numerics and symbolics, all accessible from a WYSIWYG technical document environment. Live math is expressed in its natural 2D typeset notation, linked...")
09:38, 17 March 2026 Shtsai talk contribs deleted page SAS (content was: "Category:SAS Server Category:Software Category:Statistics === Category === Statistics === Program On === ''' == SAS IS LONGER AVAILABLE AT THE GACRC == '''")
09:37, 17 March 2026 Shtsai talk contribs deleted page Freebayes-Teaching (content was: "Category:Teaching Category:Software Category:Bioinformatics === Category === Bioinformatics === Program On === Teaching === Version === 1.2.0 === Author / Distributor === [https://github.com/ekg/freebayes freebayes] === Description === "freebayes, a haplotype-based variant detector" More details are at [https://github.com/ekg/freebayes freebayes] === Running Progr...", and the only contributor was "Moses" (talk))
09:35, 17 March 2026 Shtsai talk contribs deleted page IBM XL Fortran (content was: "Category:Pcluster === Category === Compiler === Program On === pcluster === Version === 9.1 === Author / Distributor === [http://www.ibm.com/us/en/ IBM] === Description === From http://www-142.ibm.com/software/products/us/en/fortcompfami/: "IBM® Fortran Compilers help you create and maintain computationally intensive programs on a number of different platforms. The Fortran...", and the only contributor was "Shtsai" (talk))
09:35, 17 March 2026 Shtsai talk contribs deleted page IBM XL C/C++ (content was: "Category:Pcluster === Category === Compiler === Program On === pcluster === Version === 7.0 === Author / Distributor === IBM === Description === From http://www-01.ibm.com/software/awdtools/xlcpp/: "IBM® XL C and C++ compilers offer advanced compiler and optimization technologies and are built on a common code base for easier porting of your applications between platforms....", and the only contributor was "Shtsai" (talk))
09:34, 17 March 2026 Shtsai talk contribs deleted page Gromacs-Sapelo2old (content was: "Category:Sapelo2old Category:Software Category:Chemistry ===Category=== Chemistry ===Program On=== Sapelo2 ===Version=== 2016.4, 2018.1 ===Author / Distributor=== First developed in Herman Berendsens group at Groningen University. Current head authors and project leaders: Erik Lindahl (Stockholm Center for Biomembrane Research, Stockholm, SE) David van der Spoel (Biom...", and the only contributor was "Shtsai" (talk))
09:34, 17 March 2026 Shtsai talk contribs deleted page GAUSSIAN94 (content was: "Category:Pcluster === Category === Chemistry === Program On === pcluster === Version === 94 (Note that version 03 is also available. See GAUSSIAN03) === Author / Distributor === See http://www.gaussian.com === Description === Gaussian is a set of programs for performing semi-empirical, density functional theory and ab initio molecular orbital calculations. '''NOTE''': Users are required to sign a license agreement form before being allowed to run this so...")
09:33, 17 March 2026 Shtsai talk contribs deleted page GAUSSIAN03 (content was: "Category:Pcluster === Category === Chemistry === Program On === pcluster === Version === 03 === Author / Distributor === See http://www.gaussian.com === Description === Gaussian is a set of programs for performing semi-empirical, density functional theory and ab initio molecular orbital calculations. '''NOTE''': Users are required to sign a license agreement form before being allowed to run this software. Please fill out the [http://help.gacrc.uga.edu/ GACRC...")
09:33, 17 March 2026 Shtsai talk contribs deleted page GAMESS-pcluster (content was: "Category:Pcluster === Category === Chemistry === Program On === pcluster === Version === Mar. 24, 2007 R6, Apr.11, 2008 R1, Aug.11, 2011 R1 === Author / Distributor === GAMESS is maintained by the members of the Gordon research group at Iowa State University. If results obtained with GAMESS are published in the scientific literature, please reference the program from the article M.W.Schmidt, K.K.Baldridge, J.A.Boatz, S.T.Elbert, M.S.Gordon, J.H.Jensen, S.Koseki...")
09:32, 17 March 2026 Shtsai talk contribs deleted page NAMD-pcluster (content was: "Category:Pcluster === Category === Chemistry === Program On === pcluster === Version === 2.6b2, 2.7b1 === Author / Distributor === The NAMD License Agreement specifies that any reports or published results obtained with NAMD shall acknowledge its use and credit the developers as: “NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaig...")
09:32, 17 March 2026 Shtsai talk contribs deleted page DdRADseq (content was: "Please refer to RADnome", and the only contributor was "Yhuang" (talk))
09:32, 17 March 2026 Shtsai talk contribs deleted page Compute-18-8 (content was: "{| class="wikitable" style="text-align: center;" ! Slot !! GPU Serial Number !! Previous GPU Serial |- |Slot 1 || || |- |Slot 2 || || |- |Slot 3 || || |- |Slot 4 || || |- |Slot 5 || || |- |Slot 6 || || |- |Slot 7 || || |- |Slot 8 || || |- |}", and the only contributor was "Jstone" (talk))
09:31, 17 March 2026 Shtsai talk contribs deleted page Compute-18-4 (content was: "{| class="wikitable" style="text-align: center;" ! Slot !! GPU Serial Number !! Previous GPU Serial |- |Slot 1 || || |- |Slot 2 || || |- |Slot 3 || || |- |Slot 4 || || |- |Slot 5 || || |- |Slot 6 || || |- |Slot 7 || || |- |Slot 8 || || |- |}", and the only contributor was "Jstone" (talk))
09:31, 17 March 2026 Shtsai talk contribs deleted page Compute-18-24 (content was: "Slot 1 - 0322813079340 Slot 2 - 0320413039614 Slot 3 - 0320413039234 Slot 4 - 0320413039201 Slot 5 - 0320413039225 Slot 6 - 0320413039484 Slot 7 - 0320413039615 Slot 8 - 0320413039518", and the only contributor was "Jstone" (talk))
09:31, 17 March 2026 Shtsai talk contribs deleted page Compute-18-20 (content was: "{| class="wikitable" style="text-align: center;" ! Slot !! GPU Serial Number !! Previous GPU Serial |- |Slot 1 || 0321813019172 || |- |Slot 2 || 0320413039544 || |- |Slot 3 || 0320413039329 || |- |Slot 4 || 0324912021380 || |- |Slot 5 || 0320313018485 || |- |Slot 6 || 0322813078348 || |- |Slot 7 || 0324912021484 || |- |Slot 8 || 0322713004867 || |- |}", and the only contributor was "Jstone" (talk))
09:30, 17 March 2026 Shtsai talk contribs deleted page Compute-18-16 (content was: "{| class="wikitable" style="text-align: center;" ! Slot !! GPU Serial Number !! Previous GPU Serial |- |Slot 1 || 0320413039417 || |- |Slot 2 || 0320413039692 || |- |Slot 3 || 0320413039517 || |- |Slot 4 || 0325112050224 || |- |Slot 5 || 0320413039663 || |- |Slot 6 || 0320413039531 || |- |Slot 7 || 0320413039391 || |- |Slot 8 || 0320413039326 || |- |}", and the only contributor was "Jstone" (talk))
09:30, 17 March 2026 Shtsai talk contribs deleted page Compute-18-12 (content was: "{| class="wikitable" style="text-align: center;" ! Slot !! GPU Serial Number !! Previous GPU Serial |- |Slot 1 || 0324912020885 || |- |Slot 2 || 0325112050495 || |- |Slot 3 || 0322813079310 || 0320313018408 |- |Slot 4 || 0320313018502 || |- |Slot 5 || 0325112050168 || |- |Slot 6 || 0322813079327 || 0325112050368 |- |Slot 7 || 0325112050445 || |- |Slot 8 || 0320313018352 || |- |}", and the only contributor was "Jstone" (talk))

All public logs

Navigation menu

Search