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14 August 2024
- 08:5408:54, 14 August 2024 diff hist +3 Training →Using Sapelo2 Cluster at the GACRC, Part II Tag: Visual edit
- 08:5408:54, 14 August 2024 diff hist +3 Training →Regular Training Announcement Tag: Visual edit
- 08:5408:54, 14 August 2024 diff hist +385 Training →Event Schedule Tag: Visual edit
8 August 2024
- 15:2115:21, 8 August 2024 diff hist −145 Training →Event Schedule Tag: Visual edit
1 August 2024
- 14:3514:35, 1 August 2024 diff hist +188 Trinity-HpcGridRunner No edit summary
- 14:3414:34, 1 August 2024 diff hist +1,537 Trinity-HpcGridRunner No edit summary Tag: Visual edit: Switched
31 July 2024
- 13:1013:10, 31 July 2024 diff hist +95 Trinity-Sapelo2 →Trinity v2.15.1 Software Module on Sapelo2 Tag: Visual edit
- 13:0813:08, 31 July 2024 diff hist −2 Trinity-HpcGridRunner →Running Program Tag: Visual edit
30 July 2024
- 14:3114:31, 30 July 2024 diff hist +261 Trinity-HpcGridRunner No edit summary Tag: Visual edit
- 14:2714:27, 30 July 2024 diff hist +1,755 N Trinity-HpcGridRunner Created page with " ===Description=== Instruction on how to modify a Trinity script to run in conjunction with HpcGridRunner ===Running Program=== Step 1: Create normal Trinity script * Note: normal Trinity jobs should be run utilizing /lscratch, however, this method running with HpcGridRunner does not benefit from /lscratch so this example will not have any /lscratch components in it. For more information on running normal Trinity jobs with /lscratch, please see Trinity-Sapelo2#Utilizi..." Tag: Visual edit
- 08:1208:12, 30 July 2024 diff hist +115 HpcGridRunner-Sapelo2 →Running Program current Tag: Visual edit
18 July 2024
- 13:4113:41, 18 July 2024 diff hist +318 Training →Sapelo2 Cluster New User Training Tag: Visual edit
1 July 2024
- 07:1707:17, 1 July 2024 diff hist +6 Office Hours No edit summary Tag: Visual edit
- 07:1607:16, 1 July 2024 diff hist +12 Georgia Advanced Computing Resource Center No edit summary Tag: Visual edit
27 June 2024
- 14:0214:02, 27 June 2024 diff hist −79 Training →Sapelo2 Cluster New User Training Tag: Visual edit
- 08:0508:05, 27 June 2024 diff hist +761 R-Sapelo2 →Version current Tag: Visual edit
24 June 2024
- 13:4213:42, 24 June 2024 diff hist −63 Training →Linux Training for Linux-inexperienced Cluster New Users Tag: Visual edit
21 June 2024
- 14:1214:12, 21 June 2024 diff hist −77 Training →Sapelo2 Cluster New User Training Tag: Visual edit
18 June 2024
31 May 2024
- 12:5912:59, 31 May 2024 diff hist +1 m Georgia Advanced Computing Resource Center No edit summary Tag: Visual edit
- 12:5912:59, 31 May 2024 diff hist 0 m Office Hours No edit summary Tag: Visual edit
- 12:5712:57, 31 May 2024 diff hist 0 m Georgia Advanced Computing Resource Center No edit summary Tag: Visual edit
20 May 2024
- 09:3109:31, 20 May 2024 diff hist +1 Training →Regular Training Announcement Tag: Visual edit
- 09:3109:31, 20 May 2024 diff hist +482 Training →Sapelo2 Cluster New User Training Tag: Visual edit
14 May 2024
- 11:2411:24, 14 May 2024 diff hist +17,183 N IQ-Tree-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 1.6.12, 2.2.2.6 ===Author / Distributor=== Please see http://www.iqtree.org/ ===Description=== Efficient phylogenomic software by maximum likelihood. More information: http://www.iqtree.org/ === Running Program === *Version 2.2.2.6, installed in /apps/eb/IQ-TREE/2.2.2.6-gompi-2022a To use this version of IQ-TREE,..." current
- 11:2311:23, 14 May 2024 diff hist −16 Software →Partial List of Installed Software
- 11:2211:22, 14 May 2024 diff hist +11,848 N HISAT2-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.1, 3 === Author / Distributor === [https://ccb.jhu.edu/software/hisat2/index.shtml HISAT2] === Description === "HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome)." More..." current
- 11:2111:21, 14 May 2024 diff hist −5 Software →Partial List of Installed Software
- 11:1511:15, 14 May 2024 diff hist +2,566 N EIGENSOFT-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 7.2.1 ===Author / Distributor=== [https://www.hsph.harvard.edu/alkes-price/software/ EIGENSOFT] ===Description=== The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006). The EIGENSTRAT method use..." current
- 11:1411:14, 14 May 2024 diff hist −12 Software →Partial List of Installed Software
- 11:1411:14, 14 May 2024 diff hist +2,987 N Cytoscape-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 3.9.1 === Author / Distributor === Please see https://cytoscape.org/ === Description === "Cytoscape is an open source software tool for integrating, visualizing, and analyzing data in the context of networks." more details at [http://www.cytoscape.org/documentation_users.html CytoScape] === Running Program ===..." current
- 11:1311:13, 14 May 2024 diff hist −12 Software →Partial List of Installed Software
- 10:3710:37, 14 May 2024 diff hist −309 Bowtie2-Sapelo2 →Running Program Tag: Visual edit
- 10:3610:36, 14 May 2024 diff hist +11,006 N Bowtie2-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.4.1, 2.4.4, 2.4.5, 2.5.2 === Author / Distributor === [http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Bowtie2] === Description === "Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or..."
- 10:3310:33, 14 May 2024 diff hist −5 Software →Partial List of Installed Software
- 10:3210:32, 14 May 2024 diff hist +7,183 N BLAST-Sapelo2 Created page with "Category:TeachingCategory:SoftwareCategory:Bioinformatics === Category === Bioinformatics === Program On === Sapelo2 === Version === 2.2.26 === Author / Distributor === [http://blast.ncbi.nlm.nih.gov/ BLAST] === Description === "Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences." More details..." current
- 10:3210:32, 14 May 2024 diff hist −5 Software →Partial List of Installed Software
- 10:1210:12, 14 May 2024 diff hist +25 Software →Partial List of Installed Software
- 10:1010:10, 14 May 2024 diff hist +10 Software →Partial List of Installed Software
- 08:4208:42, 14 May 2024 diff hist +19 Software →Partial List of Installed Software
- 08:4208:42, 14 May 2024 diff hist −18 UBCG-Sapelo2 →Running Program current Tag: Visual edit
- 08:4008:40, 14 May 2024 diff hist +1 Structure-Teaching →Running Program current Tag: Visual edit
- 08:3908:39, 14 May 2024 diff hist 0 Structure-Sapelo2 →Running Program current Tag: Visual edit
- 08:3708:37, 14 May 2024 diff hist +40 StringTie-Teaching →Running Program current Tag: Visual edit
- 08:3608:36, 14 May 2024 diff hist −13 SRAToolKit-Sapelo2 →Version Tag: Visual edit
- 08:3308:33, 14 May 2024 diff hist +6 SAMtools-Teaching →Version current Tag: Visual edit
- 07:5307:53, 14 May 2024 diff hist −282 Training →Sapelo2 Cluster New User Training Tag: Visual edit
- 07:4907:49, 14 May 2024 diff hist +15 Rosetta-Sapelo2 →Version Tag: Visual edit
- 07:4807:48, 14 May 2024 diff hist −3 RAxML-Teaching →Running Program current Tag: Visual edit
- 07:4607:46, 14 May 2024 diff hist +175 RevBayes-Teaching →Version current Tag: Visual edit