Difference between revisions of "Uniref-Sapelo2"

From Research Computing Center Wiki
Jump to navigation Jump to search
(change most recent database date)
 
Line 1: Line 1:
 
[[Category:Sapelo2]][[Category:Software]][[Category:Bioinformatics]][[Category:Bioinformatics Database]]     
 
[[Category:Sapelo2]][[Category:Software]][[Category:Bioinformatics]][[Category:Bioinformatics Database]]     
 
latest version:
 
latest version:
Uniref100, Uniref90, Uniref50 /db/uniref/06282018] updated at 06/28/2017<br/>
+
Uniref100, Uniref90, Uniref50 /db/uniref/06282018 updated at 02/25/2022<br/>
  
 
uniref100<br/>
 
uniref100<br/>

Latest revision as of 11:08, 8 March 2022

latest version: Uniref100, Uniref90, Uniref50 /db/uniref/06282018 updated at 02/25/2022

uniref100
uniref90
uniref50

/db/uniref/latest/uniref100
/db/uniref/latest/uniref90
/db/uniref/latest/uniref50

The command generated the data is documented at UGA file sitting at the same directory with data:

module load BLAST+/2.11.0-gompi-2020b
makeblastdb -in uniref100.fasta  -dbtype prot -title uniref100  -out uniref100 -logfile uniref100.log
makeblastdb -in uniref90.fasta  -dbtype prot -title uniref90  -out uniref90 -logfile uniref90.log
makeblastdb -in uniref50.fasta  -dbtype prot -title uniref50  -out uniref50 -logfile uniref50.log

Details at UniRef at the EBI
Data Source: UniRef at the EBI FTP