Software2: Difference between revisions

From Research Computing Center Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
Line 19: Line 19:
|-
|-
<!--LIST BEGIN-->
<!--LIST BEGIN-->
| <span id =""></span>[[|]] || | || [[:Category:|||]] || [[:Category:|Category:]] || [[:Category:]]  
| <span id="0">[[4p-Sapelo | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id ="A"></span>[[AUGUSTUS-Teaching|AUGUSTUS]] || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]  
| [[4p-Sapelo2 | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id ="B"></span>[[BEDTools-Teaching|BEDTools]] || 2.26.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]  
| [[FFmpeg-Sapelo2|FFmpeg]] || 3.1.3, 3.4.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[BioPerl-Teaching|BioPerl]] || 1.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[]]  
| [[FFTW-Sapelo|FFTW]] || 2.1.5, 3.3.4 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id ="C"></span>[[canu-Teaching|Canu]] || 1.4, 1.5, 1.6, 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[:Category:|Category:]]  
| [[pigz-Sapelo2|pigz]] || 2.3.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Category:Sapelo2Category:SapeloCategory:TeachingCategory:Software|Category:Sapelo2Category:SapeloCategory:TeachingCategory:Software]] || || [[:Category:|Category:]] || [[:Category:|Category:]] || [[]]  
| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]  
|-
|-
| <span id ="G"></span>[[GeneMarkES-Teaching|GeneMarkES]] || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[:Category:|Category:]]
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id ="|"></span>[[|||]] || | || [[:Category:|Category:]] || [[:Category:|Category:]] || [[:Category:|Category:]]
|-
| [[|||]] || | || [[:Category::Category:|:Category:]] || [[:Category:|||]] || [[:Category:|Category:]]
|-
| [[|}||}]] || } || [[:Category:}|}]] || [[:Category:|Category:]] || [[:Category:|Category:]]  
|-
|-
|}
[[#top|Back To Top]] [[File:Up20.png|20px|link=#top]]
[[Category:Sapelo2]][[Category:Sapelo]][[Category:Teaching]][[Category:Software]]

Revision as of 14:50, 15 August 2018

Below is a partial list of software packages installed on Sapelo, Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching:

module spider

You can also use the command above to search for a specific application. For more information, please see Lmod.

Installed Software List

Last updated 2018-08-15. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name Version Category Cluster Top
4p 1.0 Bioinformatics Sapelo Up20.png
4p 1.0 Bioinformatics Sapelo2 Up20.png
FFmpeg 3.1.3, 3.4.1 Other Sapelo2 Up20.png
FFTW 2.1.5, 3.3.4 Math Library Sapelo Up20.png
pigz 2.3.3 Other Sapelo2 Up20.png
Zbar 0.10 Graphics Sapelo Up20.png
zlib 1.2.5, 1.2.8 Library Sapelo Up20.png

Back To Top Up20.png