Software-old

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Revision as of 15:53, 11 October 2018 by Pakala (talk | contribs)
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Below is a partial list of software packages installed on Sapelo, Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching:

module spider

You can also use the command above to search for a specific application. For more information, please see Lmod.

Installed Software List

Last updated 2018-10-11. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name Version Category Cluster Top
4p 1.0 Bioinformatics Sapelo Up20.png
4p 1.0 Bioinformatics Sapelo2 Up20.png
ABySS 2.0.2 Bioinformatics Sapelo Up20.png
ABySS 1.9.0, 2.0.2, 2.1.0 Bioinformatics Sapelo2 Up20.png
ADMIXTURE 1.3.0 Bioinformatics Sapelo2 Up20.png
aeneas 1.7.3 Other Sapelo Up20.png
aeneas 1.7.3 Other Sapelo2 Up20.png
AFNI 17.3.05 Other Sapelo2 Up20.png
AGE 0.4 Bioinformatics Sapelo Up20.png
AlignGraph 20180709 Bioinformatics Sapelo2 Up20.png
AlleleSeq_pipeline 1.2a Bioinformatics Sapelo2 Up20.png
Allim 1.2 Bioinformatics Sapelo2 Up20.png
Allmaps 0.6.6 Bioinformatics Sapelo Up20.png
AMBER 14 Chemistry Sapelo Up20.png
AMBER 14 Chemistry Sapelo2 Up20.png
amos 3.1.0 Bioinformatics Sapelo Up20.png
AMOS 3.1.0 Bioinformatics Sapelo2 Up20.png
Anaconda2 4.2.0, 4.3.0, 4.4.0 Programming Sapelo Up20.png
Anaconda2 5.0.1 Programming Sapelo2 Up20.png
Anaconda3 4.2.0, 4.3.0, 5.0.0 Programming Sapelo Up20.png
Anaconda3 5.0.1 Programming Sapelo2 Up20.png
Anaconda 2.2.0, 2.5.0, 3-2.2.0, 2-4.1.1 Programming Sapelo Up20.png
ANI 2.0 Bioinformatics Sapelo Up20.png
ANNOgesic 0.6.17 Bioinformatics Sapelo Up20.png
annovar 2017Jul16 Bioinformatics sapelo2 Up20.png
ANSYS 16.2 Engineering Sapelo Up20.png
anvi'o 4, 5.1 Bioinformatics sapelo2 Up20.png
apache-ant 1.9.6 Other Sapelo Up20.png
Aragorn 1.2.38 Bioinformatics Sapelo2 Up20.png
ARC 1.1.4-beta Bioinformatics Sapelo Up20.png
Arlequin 3.5.2.2 Bioinformatics Sapelo2 Up20.png
ART 20160605 Bioinformatics Sapelo Up20.png
ART 20160605 Bioinformatics Sapelo2 Up20.png
Artemis 17.0.1 Bioinformatics Sapelo2 Up20.png
Artemis 17.0.1 Bioinformatics Teaching Up20.png
AStalavista 3.2 Bioinformatics Sapelo Up20.png
ASTRAL 5.6.1 Bioinformatics Sapelo2 Up20.png
ATk 2.22.0 Other Sapelo2 Up20.png
ATLAS 3.10.2 Other Sapelo2 Up20.png
augustus 3.2.3 Bioinformatics Sapelo Up20.png
AUGUSTUS 3.2.3 Bioinformatics Sapelo2 Up20.png
AUGUSTUS 3.2.3 Bioinformatics Teaching Up20.png
BAGEL 2016.12.14, 2017.02.13 Chemistry Sapelo Up20.png
BaitsTools 1.0 Bioinformatics Sapelo Up20.png
bam-readcount 0.8.0 Bioinformatics Sapelo Up20.png
Bamtools 2.4.0 Bioinformatics Sapelo Up20.png
BamTools 2.4.1 Bioinformatics Sapelo2 Up20.png
Barrnap 0.9 Bioinformatics Sapelo2 Up20.png
basespace-cli 0.8.10 Bioinformatics Sapelo Up20.png
basespace-cli 0.9.17 Bioinformatics Sapelo2 Up20.png
BayesAss 3.0.4 Bioinformatics Sapelo2 Up20.png
Bazel 0.4.5 Other Sapelo Up20.png
Bazel 0.8.1, 0.11.1 Other Sapelo2 Up20.png
BBMap 35.82 Bioinformatics Sapelo Up20.png
BBMap 37.67 Bioinformatics Sapelo2 Up20.png
bcftools 1.6 Bioinformatics Sapelo Up20.png
BCFtools 1.3.1, 1.6, 1.8, 1.9 Bioinformatics Sapelo2 Up20.png
BCFtools 1.3.1, 1.6, 1.8 Bioinformatics Teaching Up20.png
bcl2fastq 2.17.1.14 Bioinformatics Sapelo Up20.png
bcl2fastq 2.20.0 Bioinformatics Sapelo2 Up20.png
BEAST 2.4.1 Bioinformatics Sapelo Up20.png
Beast 1.8.4, 1.10.1, 2.4.8pre, 2.4.8, 2.5.0 Bioinformatics Sapelo2 Up20.png
BEDops 2.4.14 Bioinformatics Sapelo Up20.png
BEDOPS 2.4.30 Bioinformatics Sapelo2 Up20.png
BEDTools 2.24.0, 2.25.0 2.26.0 Bioinformatics Sapelo Up20.png
BEDTools 2.26.0 Bioinformatics Sapelo2 Up20.png
BEDTools 2.26.0 Bioinformatics Teaching Up20.png
BEST 2.3.1 Bioinformatics Sapelo Up20.png
BiBench 0.2 Bioinformatics Sapelo Up20.png
bioawk 1.0 Bioinformatics Sapelo Up20.png
bioawk 1.0 Bioinformatics Sapelo2 Up20.png
BioKanga 21.0.0 Bioinformatics Sapelo2 Up20.png
BionanoSolve 3.2.1-04122018, 3.2.2-08222018 Bioinformatics Sapelo2 Up20.png
BioPerl 1.6.923 Bioinformatics Sapelo Up20.png
BioPerl 1.7.1 Bioinformatics Sapelo2 Up20.png
BioPerl 1.7.1 Bioinformatics Teaching Up20.png
BioPython 1.66 Bioinformatics Sapelo Up20.png
BioPython 1.68 Bioinformatics Sapelo2 Up20.png
Biopython 1.68 Bioinformatics Teaching Up20.png
Bismark 0.16.3 Bioinformatics Sapelo Up20.png
Bison 2.7, 3.0.2, 3.0.4 Other Sapelo2 Up20.png
BLASR 2.2 Bioinformatics Sapelo2 Up20.png
BLAST+ 2.6.0, 2.7.1 Bioinformatics Sapelo2 Up20.png
BLAST+ 2.6.0 Bioinformatics Teaching Up20.png
BLAST 2.2.26 Bioinformatics Sapelo2 Up20.png
BLAST 2.2.26 Bioinformatics Teaching Up20.png
Blat 36 Bioinformatics Sapelo Up20.png
BLAT 3.4, 3.5 Bioinformatics Sapelo2 Up20.png
Blosc 1.12.1 Library Sapelo2 Up20.png
Boost 1.47.0, 1.57.0, 1.59.0 Library Sapelo Up20.png
Boost 1.54.0, 1.61.0, 1.63.0, 1.65.1 Library Sapelo2 Up20.png
Boto3 1.9.14 Other Sapelo2 Up20.png
bowtie2 2.2.4 Bioinformatics Sapelo Up20.png
bowtie2 2.2.3, 2.3.3, 2.3.4.1 Bioinformatics Sapelo2 Up20.png
Bowtie2 2.2.3, 2.3.3, 2.3.4.1 Bioinformatics Teaching Up20.png
bowtie 1.1.1 Bioinformatics Sapelo Up20.png
Bowtie 1.2.2 Bioinformatics Sapelo2 Up20.png
BP&P 4.0 Bioinformatics Sapelo Up20.png
braker 2.0.5 Bioinformatics Sapelo2 Up20.png
breakdancer 1.1.2_2013_03_08 Bioinformatics Sapelo Up20.png
BreakDancer 1.4.5-foss-2016b Bioinformatics Sapelo2 Up20.png
BS Seeker2 2.1.1 Bioinformatics Sapelo Up20.png
BS-Seeker2 2.1.5 Bioinformatics Sapelo2 Up20.png
Burrows-Wheeler Aligner (BWA) 0.7.10, 0.7.15 Bioinformatics Sapelo Up20.png
BUSCO 3.0.2 Bioinformatics Sapelo Up20.png
BUSCO 2.0, 3.0.2 Bioinformatics Sapelo2 Up20.png
BWA 0.7.15, 0.7.17 Bioinformatics Sapelo2 Up20.png
BWA 0.7.17, 0.7.15 Bioinformatics Teaching Up20.png
Caffe 12.04.2015 Other Sapelo Up20.png
Caffe 04082018 Other Sapelo2 Up20.png
Cairo 1.10.0 Bioinformatics Sapelo Up20.png
cairo 1.14.6, 1.14.10, 1.14.12 Bioinformatics Sapelo2 Up20.png
canu 1.4 Bioinformatics Sapelo Up20.png
Canu 1.7, 1.7.1 Bioinformatics Sapelo2 Up20.png
Canu 1.4, 1.5, 1.6, 1.7 Bioinformatics Teaching Up20.png
CAP-miRSeq 05/20184 Bioinformatics Sapelo2 Up20.png
cap3 03/09/2015 Bioinformatics Sapelo Up20.png
CAP3 03092015 Bioinformatics Sapelo2 Up20.png
CD-HIT 4.6.8 Bioinformatics Sapelo2 Up20.png
cdhit 4.6.7 Bioinformatics Sapelo Up20.png
CDNA_Cupcake 3.9 Bioinformatics Sapelo Up20.png
CDNA_Cupcake 5.9 Bioinformatics Sapelo2 Up20.png
CellProfiler 2.2.0 Bioinformatics Sapelo Up20.png
censor 4.2.29 Bioinformatics Sapelo Up20.png
CENSOR 4.2.29 Bioinformatics Sapelo2 Up20.png
Centrifuge 2.3.2 Bioinformatics Sapelo Up20.png
CFITSIO 3.38 Library Sapelo2 Up20.png
CFOUR 1.2, 2.00-beta Chemistry Sapelo Up20.png
CGAL 4.11 Library Sapelo2 Up20.png
CGAT 0.2.4 Bioinformatics Sapelo Up20.png
CGmapTools 0.0.3b Bioinformatics Sapelo Up20.png
Cgmaptools 0.1.1 Bioinformatics Sapelo2 Up20.png
Check 0.10.0 Programming Sapelo Up20.png
CheckM 1.0.5 Bioinformatics Sapelo Up20.png
Chimera 1.13 Bioinformatics Sapelo2 Up20.png
Chromosomer 0.1.4a Bioinformatics Sapelo Up20.png
Chromosomer 0.1.4a Bioinformatics Teaching Up20.png
CIRCexplorer2 2.2.3 Bioinformatics Sapelo Up20.png
circlator 1.4.1 Bioinformatics Sapelo Up20.png
circlator 1.5.3 Bioinformatics Sapelo2 Up20.png
circos 0.69 Bioinformatics Sapelo Up20.png
Circos 0.69-6 Bioinformatics Sapelo2 Up20.png
cisa 20140304 Bioinformatics Sapelo Up20.png
Cleaveland4 4.4 Bioinformatics Sapelo Up20.png
Cleaveland4 4.4 Bioinformatics Sapelo2 Up20.png
Clustal-Omega 1.2.4 Bioinformatics Sapelo2 Up20.png
ClustalW2 2.1 Bioinformatics Sapelo2 Up20.png
ClustalW 1.83 Bioinformatics Sapelo Up20.png
clusteringConsensus 1.02 Bioinformatics Sapelo Up20.png
cmake 2.8.12.2, 3.0.2, 3.7.2, 3.9.3 Other Sapelo Up20.png
CMake 3.0.0, 3.4.3, 3.5.2, 3.6.1, 3.6.2, 3.7.2, 3.8.0, 3.9.1, 3.9.5, 3.10.2 Other Sapelo2 Up20.png
cnv-seq 03132017 Bioinformatics Sapelo Up20.png
CNVnator 0.3.3 Bioinformatics Sapelo Up20.png
CNVnator 0.3.3 Bioinformatics Sapelo2 Up20.png
Cogent 3.5 Bioinformatics Sapelo2 Up20.png
Consed 29.0 Bioinformatics Sapelo2 Up20.png
CONSEL 0.20 Bioinformatics Sapelo Up20.png
Conspred v1.32 Bioinformatics Sapelo Up20.png
cortex_var 1.0.5.21 Bioinformatics Sapelo Up20.png
CPLEX 12.6.3 Engineering Sapelo Up20.png
CPLEX 12.6.3 Engineering Sapelo2 Up20.png
crest 1.0 Bioinformatics Sapelo2 Up20.png
CRISPResso 1.0.13 Bioinformatics Sapelo2 Up20.png
Croco_tools 1.0 Other Sapelo Up20.png
CrossMap 0.2.5 Bioinformatics Sapelo Up20.png
CUDA 5.0.35, 6.5.14, 7.5.18, 8.0.61 Programming Sapelo Up20.png
CUDA 7.0.28, 7.5.18, 8.0.61, 8.0.61_375.26-GCC-5.4.0-2.26, 9.0.176, 9.1.85 Programming Sapelo2 Up20.png
cuDNN 7.0.4, 7.2.1.38 Programming Sapelo2 Up20.png
cufflinks 2.2.1 Bioinformatics Sapelo Up20.png
Cufflinks 2.2.1 Bioinformatics Sapelo2 Up20.png
Cufflinks 2.2.1 Bioinformatics Teaching Up20.png
cURL 7.49.1 Other Sapelo2 Up20.png
Cutadapt 1.14 Bioinformatics Sapelo Up20.png
cutadapt 1.9.1, 1.16 Bioinformatics Sapelo2 Up20.png
cv2 3.3.0.10 Other Sapelo Up20.png
Cython 0.27.3, 0.28.5 Programming Sapelo2 Up20.png
CythonGSL 0.2.2 Other Sapelo2 Up20.png
CytoScape 3.3.0 Bioinformatics Sapelo Up20.png
Danpos2 2.2.2 Bioinformatics Sapelo Up20.png
Danpos2 2.2.2 Bioinformatics Sapelo2 Up20.png
datamash 1.0.7 Other Sapelo Up20.png
DBG2OLC 20170208 Bioinformatics Sapelo2 Up20.png
DBG2OLC 20170208 Bioinformatics Teaching Up20.png
ddocent 2.2.16 Bioinformatics Sapelo Up20.png
DDSCAT 7.3.2 Chemistry Sapelo2 Up20.png
DeconSeq 0.4.3 Bioinformatics Sapelo Up20.png
deepnet 20151013 Other Sapelo Up20.png
deeptools 2.3.1 Bioinformatics Sapelo Up20.png
deepTools 3.0.2 Bioinformatics Sapelo2 Up20.png
DeepVariant 0.7.0 Bioinformatics Sapelo2 Up20.png
DeFCoM 1.0.1 Bioinformatics Sapelo Up20.png
DELLY 0.7.7 Bioinformatics Sapelo Up20.png
dendropy 3.12.0 Bioinformatics Sapelo Up20.png
DendroPy 4.3.0 Bioinformatics Sapelo2 Up20.png
depict 140721 Bioinformatics Sapelo Up20.png
detect-NAHR 2015.09.16 Bioinformatics Sapelo Up20.png
detonate 1.11 Bioinformatics Sapelo2 Up20.png
DIAMOND 0.8.36 Bioinformatics Sapelo Up20.png
DIAMOND 1.0 Bioinformatics Sapelo2 Up20.png
DISCOVARdenovo 52488 Bioinformatics Sapelo2 Up20.png
DLCpar 1.0 Bioinformatics Sapelo Up20.png
DLCpar 1.0 Bioinformatics Sapelo2 Up20.png
Doxygen 1.8.7, 1.8.11, 1.8.13 Other Sapelo2 Up20.png
DyNet 2.1 Other Sapelo2 Up20.png
[[|Eigen-Sapelo2|Eigen]] 3.2.3, 3.3.5 Library Sapelo2 Up20.png
EIGENSOFT 6.1.4 Bioinformatics Sapelo2 Up20.png
EMBOSS 6.5.7 Bioinformatics Sapelo Up20.png
EMBOSS 6.6.0 Bioinformatics Sapelo2 Up20.png
EMBOSS 6.6.0 Bioinformatics Teaching Up20.png
emirge 0.61.1 Bioinformatics Sapelo Up20.png
EMMAX beta beta Bioinformatics Sapelo2 Up20.png
Ensembl-VEP 20180914 Bioinformatics Sapelo2 Up20.png
EPIG-Seq v01 Bioinformatics Sapelo Up20.png
EricScript 0.5.5 Bioinformatics Sapelo2 Up20.png
ESMF 7.0.2 Other Sapelo2 Up20.png
espeak 1.48.04 Other Sapelo Up20.png
eSpeak 1.48.04 Other Sapelo2 Up20.png
exabayes 1.4.1 Bioinformatics Sapelo Up20.png
ExaML 3.0.11 Bioinformatics Sapelo Up20.png
exonerate 2.2.0 Bioinformatics Sapelo Up20.png
Exonerate 2.4.0 Bioinformatics Sapelo2 Up20.png
Exonerate 2.4.0 Bioinformatics Teaching Up20.png
Expander 7.11 Bioinformatics Sapelo Up20.png
FALCON 0.4.0 Bioinformatics Sapelo Up20.png
FALCON 02282018_unzip Bioinformatics Sapelo2 Up20.png
Fast-Plast 1.2.6 Bioinformatics Sapelo2 Up20.png
FASTA 36.3.5e Bioinformatics Sapelo2 Up20.png
FastME 2.1.5 Bioinformatics Sapelo Up20.png
FastME 2.1.5 Bioinformatics Sapelo2 Up20.png
fastphase 1.4.0 Bioinformatics Sapelo Up20.png
FastPlast 1.2.6 Bioinformatics Sapelo Up20.png
FastQC 0.11.4 Bioinformatics Sapelo Up20.png
FastQC 0.11.5 Bioinformatics Sapelo2 Up20.png
FASTQSim 3.0 Bioinformatics Sapelo Up20.png
FastQValidator 0.1.1a Bioinformatics Sapelo2 Up20.png
fastStructure 1.0 Bioinformatics Sapelo Up20.png
FastSTRUCTURE 1.0 Bioinformatics Sapelo2 Up20.png
FastTree 2.1.10 Bioinformatics Sapelo2 Up20.png
FastViromeExplorer 20180918 Bioinformatics Sapelo2 Up20.png
FASTX-Toolkit 0.0.14 Bioinformatics Sapelo2 Up20.png
FastX 0.0.13.2, 0.0.14 Bioinformatics Sapelo Up20.png
FFmpeg 2.8.2 Other Sapelo Up20.png
FFmpeg 3.1.3, 3.4.1 Other Sapelo2 Up20.png
FFTW 2.1.5, 3.3.4 Math Library Sapelo Up20.png
FFTW 3.3.4, 3.3.6, 3.3.7 Math Library Sapelo2 Up20.png
FIAT 1.6.0 Other Sapelo2 Up20.png
Find_Cns 2016/07/21 Bioinformatics Sapelo Up20.png
fineRADstructure 2016/12/09 Bioinformatics Sapelo Up20.png
FineSTRUCTURE 2.0.7 Bioinformatics Sapelo Up20.png
fineSTRUCTURE 2.1.3 Bioinformatics Sapelo2 Up20.png
FLASH 1.2.11 Bioinformatics Sapelo Up20.png
FLASH 1.2.11 Bioinformatics Sapelo2 Up20.png
FLTK 1.3.4 Other Sapelo2 Up20.png
FoX 4.1.2 Library Sapelo2 Up20.png
Freebayes 1.0.1 Bioinformatics Sapelo Up20.png
Freebayes 1.2.0 Bioinformatics Sapelo2 Up20.png
FreeSurfer 6.0.0 Medical-Informatics Sapelo Up20.png
FriBidi 1.0.1 Library Sapelo2 Up20.png
FuzzyWuzzy 0.17.0 Other Sapelo2 Up20.png
fxtract 2.3 Bioinformatics Sapelo2 Up20.png
GAG 2.0.1 Bioinformatics Sapelo2 Up20.png
GAG 2.0.1 Bioinformatics Teaching Up20.png
gam-ngs 1.1b Bioinformatics Sapelo Up20.png
GAMESS 5Dec2014 Chemistry Sapelo Up20.png
GAMESS 14Feb2018 Chemistry Sapelo2 Up20.png
GAP 4.8.7 Other Sapelo Up20.png
GapFiller 2.1.1 Bioinformatics Sapelo Up20.png
GapFiller 2.1.1 Bioinformatics Sapelo2 Up20.png
GapFiller 2.1.1 Bioinformatics Teaching Up20.png
GAPIT 20180524 Bioinformatics Sapelo2 Up20.png
gat 1.2 Bioinformatics Sapelo Up20.png
gatk 3.6 Bioinformatics Sapelo Up20.png
GATK 3.4-0, 3.8-0, 3.8-1, 4.0.3.0 Bioinformatics Sapelo2 Up20.png
GATK 3.8-0, 3.4-0 Bioinformatics Teaching Up20.png
GAUSSIAN 09 Chemistry Sapelo Up20.png
GAUSSIAN 09 Chemistry Sapelo2 Up20.png
GaussView 5 Chemistry Sapelo Up20.png
GAWN 0.3.2 Bioinformatics Sapelo Up20.png
Gblocks 0.91b Bioinformatics Sapelo Up20.png
GBlocks 0.91b Bioinformatics Sapelo2 Up20.png
GCTA 1.26.0 Bioinformatics Sapelo Up20.png
GCTA 1.26.0 Bioinformatics Sapelo2 Up20.png
gd 2.2.4 Bioinformatics Sapelo Up20.png
GD 2.66 Bioinformatics Sapelo2 Up20.png
gdal 2.1.0 Library Sapelo Up20.png
GDAL 2.1.0, 2.2.2 Library Sapelo2 Up20.png
GDC-client 1.0.1 Bioinformatics Sapelo Up20.png
gdc-client 1.3.0 Bioinformatics Sapelo2 Up20.png
Gdk-pixbuf 2.36.0 Library Sapelo2 Up20.png
GEM-library 20130406-045632 Bioinformatics Sapelo2 Up20.png
GEM 2.5 Bioinformatics Sapelo Up20.png
Gemini 0.20.0 Bioinformatics Sapelo Up20.png
GeneMark-ES 4.33 Bioinformatics Sapelo Up20.png
GeneMark.hmm.eukaryotic 4.30 Bioinformatics Sapelo2 Up20.png
GeneMarkES 4.33 Bioinformatics Sapelo2 Up20.png
GeneMarkES 4.33 Bioinformatics Teaching Up20.png
GeneMarkS-T 4.33 Bioinformatics Sapelo2 Up20.png
GeneMarkS 4.30 Bioinformatics Sapelo2 Up20.png
Gengetopt 2.22 Other Sapelo Up20.png
Genome Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 Bioinformatics Sapelo2 Up20.png
GenomeTools 1.5.9 Bioinformatics Sapelo Up20.png
GenomeTools 1.5.9 Bioinformatics Sapelo2 Up20.png
GenomicConsensus 3.0.2 Bioinformatics Sapelo Up20.png
gensim 2.3.0 Library Sapelo Up20.png
geos 3.5.0 Library Sapelo Up20.png
GEOS 3.6.2 Library Sapelo2 Up20.png
Gerud3 12202017 Bioinformatics Sapelo Up20.png
gff3ToGenePred 1.0 Bioinformatics Sapelo Up20.png
gffcompare 0.10.4 Bioinformatics Sapelo Up20.png
Gffcompare 0.10.4 Bioinformatics Sapelo2 Up20.png
gffread 0.9.12 Bioinformatics Sapelo2 Up20.png
GFlow 0.1.7 Library Sapelo2 Up20.png
Ghostscript 9.20, 9.22 Other Sapelo2 Up20.png
git 1.7.1, 2.7.0 Other Sapelo Up20.png
GKIN 1.1 Bioinformatics Sapelo Up20.png
GL2PS 1.4.0 Library Sapelo2 Up20.png
GLib 2.49.5, 2.53.5, 2.54.3 Library Sapelo2 Up20.png
GLIMMER 3.02b Bioinformatics Sapelo2 Up20.png
GLPK 4.63, 4.65 Programming Sapelo2 Up20.png
GMA 0.1.5 Bioinformatics Sapelo Up20.png
gmap-gsnap 2017-01-14 Bioinformatics Sapelo Up20.png
GMAP-GSNAP 2016-11-07 Bioinformatics Sapelo2 Up20.png
GMATA 2017-01-14 Bioinformatics Sapelo Up20.png
GMP 4.3.1, 6.0.0 Library Sapelo Up20.png
GMP 4.3.2, 6.1.1, 6.1.2 Library Sapelo2 Up20.png
GMPFRXX 20081116 Library Sapelo Up20.png
GNU Compilers 4.4.7, 4.7.4, 5.3.0 Compiler Sapelo Up20.png
gnuplot 4.2.6 Bioinformatics Sapelo Up20.png
gnuplot 5.0.5 Bioinformatics Sapelo2 Up20.png
GObject-Introspection 1.49.1, 1.54.1 Other Sapelo2 Up20.png
google-cloud 0.32.0 Other Sapelo Up20.png
grace 5.1.25 Graphics Sapelo Up20.png
grace 5.1.25 Graphics Sapelo2 Up20.png
GrADS 2.1a3 Other Sapelo Up20.png
GraftM 0.10.1 Bioinformatics Sapelo Up20.png
GraftM 0.11.1 Bioinformatics Sapelo2 Up20.png
GraphicsMagicK 1.3.28 Other Sapelo2 Up20.png
Graphviz 2.40.1 Other Sapelo Up20.png
Graphviz 2.40.1 Other Sapelo2 Up20.png
Gromacs 5.0.2, 5.1.3 Chemistry Sapelo Up20.png
Gromacs 2016.4, 2018.1 Chemistry Sapelo2 Up20.png
GSL 1.16 Math Library Sapelo Up20.png
GSL 1.16, 2.1, 2.3. 2.4 Math Library Sapelo2 Up20.png
GStreamer 1.14.0 Bioinformatics Sapelo2 Up20.png
GTK+ 2.24.31 Library Sapelo2 Up20.png
GTS 0.7.6 Library Sapelo2 Up20.png
Guile 1.8.8 Other Sapelo2 Up20.png
h5py 2.6.0 Other Sapelo Up20.png
h5py 2.7.1 Other Sapelo2 Up20.png
hapcut2 20170126 Bioinformatics Sapelo Up20.png
Haploview 4.2 Bioinformatics Sapelo Up20.png
HarfBuzz 1.3.1, 1.7.5 Other Sapelo2 Up20.png
harp 130306_105556 Bioinformatics Sapelo Up20.png
HARP 140925_103521 Bioinformatics Sapelo2 Up20.png
HarvestTools 1.2 Bioinformatics Sapelo2 Up20.png
HDF5 1.8.6, 1.8.14 Library Sapelo Up20.png
HGTFinder 20170929 Bioinformatics Sapelo Up20.png
HH-suite 3.0 Bioinformatics Sapelo Up20.png
hic-pro 2.8.0 Bioinformatics Sapelo Up20.png
HiCUP 0.5.9 Bioinformatics Sapelo Up20.png
hindex 1.42 Bioinformatics Sapelo2 Up20.png
HINGE 032717 Bioinformatics Sapelo Up20.png
HipMer 0.9.4 Bioinformatics Sapelo Up20.png
HISAT2 2.1.0 Bioinformatics Sapelo Up20.png
HISAT2 2.1.0 Bioinformatics Sapelo2 Up20.png
HISAT2 2.1.0 Bioinformatics Teaching Up20.png
Hmmer 3.1b2 Bioinformatics Sapelo Up20.png
HMMER 3.1b2 Bioinformatics Sapelo2 Up20.png
Homer 4.8 Bioinformatics Sapelo Up20.png
Homer 4.9.1, 4.10 Bioinformatics Sapelo2 Up20.png
HPCGridRunner 1.0.2 Tools Sapelo Up20.png
HPCGridRunner 1.0.2 Tools Sapelo2 Up20.png
htseq 0.6.1p1 Bioinformatics Sapelo Up20.png
HTSeq 0.9.1 Bioinformatics Sapelo2 Up20.png
HTSlib 1.3.2, 1.6, 1.8 Library Sapelo2 Up20.png
HUMAnN2 0.6.1 Bioinformatics Sapelo Up20.png
HybPiper 1.3.1 Bioinformatics Sapelo2 Up20.png
HyDe 1.0 Bioinformatics Sapelo Up20.png
HyPhy 2.3.5 Bioinformatics Sapelo Up20.png
Hypre 2.11.1 Library Sapelo2 Up20.png
I-TASSER 5.0 Bioinformatics Sapelo Up20.png
IDBA 1.1.2 Bioinformatics Sapelo Up20.png
IGV 2.3.81 Bioinformatics Sapelo Up20.png
IGV 2.4.4 Bioinformatics Sapelo2 Up20.png
IGVTools 2.3.81 Bioinformatics Sapelo Up20.png
IGVTools 2.3.98 Bioinformatics Sapelo2 Up20.png
illumiprocessor 2.0.7 Bioinformatics Sapelo Up20.png
ImageMagick 7.0.5 Other Sapelo2 Up20.png
Infernal 1.1.2 Bioinformatics Sapelo2 Up20.png
Intel Compilers 14.0.0, 15.0.2 Compiler Sapelo Up20.png
iprscan (InterProScan) 5.16-55.0 Bioinformatics Sapelo Up20.png
iprscan (InterProScan) 5.29-68.0, 5.31-70.0 Bioinformatics Sapelo2 Up20.png
ipyrad 0.3.7, 0.5.15, 0.7.3 Bioinformatics Sapelo Up20.png
ipyrad 0.7.24 Bioinformatics Sapelo2 Up20.png
Ipyrad 0.7.24 Bioinformatics Teaching Up20.png
IPython 5.3.0, 6.2.1 Other Sapelo2 Up20.png
IQ-Tree 1.5.5, 1.6.1 Bioinformatics Sapelo Up20.png
IQ-Tree 1.5.5, 1.6.5 Bioinformatics Sapelo2 Up20.png
iRep 1.10 Bioinformatics Sapelo Up20.png
IRMA 0.6.7 Bioinformatics Sapelo2 Up20.png
IsoSeq_SA3nUP 09272017 Bioinformatics Sapelo Up20.png
ITSTool 2.0.4 Utility Sapelo2 Up20.png
iva 1.0.3 Bioinformatics Sapelo Up20.png
JAGS 3.4.0, 4.1.0, 4.2.0 Statistics Sapelo Up20.png
JAGS 4.3.0 Statistics Sapelo2 Up20.png
JasPer 1.900.1 Other Sapelo Up20.png
JasPer 1.900.1, 2.0.12 Other Sapelo2 Up20.png
Java 6, 7, 8 Programming Sapelo Up20.png
Java 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 Programming Sapelo2 Up20.png
Java 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 Programming Teaching Up20.png
Jellyfish 2.2.3 Bioinformatics Sapelo Up20.png
Jellyfish 2.2.6 Bioinformatics Sapelo2 Up20.png
JModelTest 2.1.10 Bioinformatics Sapelo2 Up20.png
Juicer 1.5.6 Bioinformatics Sapelo2 Up20.png
JUnit 4.12 Other Sapelo2 Up20.png
Jupyter Notebook 2.5.0 Programming Sapelo Up20.png
Kaiju 1.6.2 Bioinformatics Sapelo2 Up20.png
kallisto 0.42.5 Bioinformatics Sapelo Up20.png
kallisto 0.43.1 Bioinformatics Sapelo2 Up20.png
KAT 2.3.4 Bioinformatics Sapelo Up20.png
KAT 2.4.1 Bioinformatics Sapelo2 Up20.png
KentUtils 302.1.0 Bioinformatics Sapelo Up20.png
keras 1.0.8, 2.0.4 Other Sapelo Up20.png
keras 2.0.6, 2.2.2 Other Sapelo2 Up20.png
KmerGenie 1.7016 Bioinformatics Sapelo Up20.png
KmerGenie 1.7044 Bioinformatics Sapelo2 Up20.png
KmerGenie 1.7044 Bioinformatics Teaching Up20.png
Kraken 0.10.5-beta Bioinformatics Sapelo Up20.png
KronaTools 2.7 Bioinformatics Sapelo2 Up20.png
LAME 3.100 Other Sapelo2 Up20.png
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LAST 719 Bioinformatics Sapelo Up20.png
LAST 956 Bioinformatics Sapelo2 Up20.png
LASTZ 1.02.00, 1.03.73 Bioinformatics Sapelo Up20.png
LASTZ 1.04.00 Bioinformatics Sapelo2 Up20.png
LDhat 2.2 Bioinformatics Sapelo Up20.png
LDhat 2.2 Bioinformatics Sapelo2 Up20.png
LDhelmet 1.7 Bioinformatics Sapelo Up20.png
LDhelmet 1.10 Bioinformatics Sapelo2 Up20.png
LDhot 0.4 Bioinformatics Sapelo Up20.png
LEfSe 20160621 Bioinformatics Sapelo Up20.png
libradtran 1.7, 2.0.1 Other Sapelo Up20.png
librosa 0.4.3 Other Sapelo Up20.png
LibStatGen 1.0.14 Bioinformatics Sapelo2 Up20.png
LIBSVM 3.21 Other Sapelo Up20.png
LibTIFF 4.0.6, 4.0.8, 4.0.9 Library Sapelo2 Up20.png
LittleCMS 2.8 Other Sapelo2 Up20.png
LLVM 3.8.1, 4.0.0, 5.0.1, 6.0.0 Library Sapelo2 Up20.png
LMDB 0.9.22 Bioinformatics Sapelo2 Up20.png
lmod 5.8 Other Sapelo Up20.png
LocARNA 1.9.2 Bioinformatics Sapelo Up20.png
LoFreq 2.1.2 Bioinformatics Sapelo Up20.png
LoFreq 2.1.2 Bioinformatics Sapelo2 Up20.png
Log-Log4perl 1.49 Other Sapelo2 Up20.png
LongRanger 2.2.2 Bioinformatics Sapelo2 Up20.png
lrslib 6.2 Other Sapelo2 Up20.png
LS-DYNA 10.123355 Engineering Sapelo2 Up20.png
LS-PrePost 4.5 Engineering Sapelo2 Up20.png
LTR_retriever 20170907 Bioinformatics Sapelo Up20.png
LTR_retriever 1.6 Bioinformatics Sapelo2 Up20.png
LUMPY 0.2.13 Bioinformatics Sapelo Up20.png
LUMPY 0.2.13 Bioinformatics Sapelo2 Up20.png
LZO 2.1.0 Bioinformatics Sapelo Up20.png
LZO 2.10 Bioinformatics Sapelo2 Up20.png
M4 1.4.16, 1.4.17, 1.4.17 Other Sapelo2 Up20.png
MaCS-simulator 0.5d Bioinformatics Sapelo Up20.png
MACS2 2.1.1 Bioinformatics Sapelo Up20.png
MACS2 2.1.1 Bioinformatics Sapelo2 Up20.png
Mafft 7.273-e Bioinformatics Sapelo Up20.png
MAFFT 7.273, 7.313, 7.397 Bioinformatics Sapelo2 Up20.png
MAFFT 7.130, 7.273, 7.313 Bioinformatics Teaching Up20.png
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mageck 0.5 Bioinformatics Sapelo Up20.png
Magma-GPU 2.3.0 Other Sapelo2 Up20.png
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Magma 2.22-9 Other Sapelo2 Up20.png
Mahotas 1.4.3 Bioinformatics Sapelo Up20.png
mahotas 1.4.3 Bioinformatics Sapelo2 Up20.png
Make 4.2 Programming Sapelo Up20.png
Maker 2.31.9 Bioinformatics Sapelo2 Up20.png
Maker 2.31.9 Bioinformatics Teaching Up20.png
Mako 1.0.4, 1.0.7 Other Sapelo2 Up20.png
MARVEL 20180918 Bioinformatics Sapelo2 Up20.png
MaSuRCA 3.1.3 Bioinformatics Sapelo Up20.png
MaSuRCA 3.2.2 Bioinformatics Sapelo2 Up20.png
Matlab R2015aSP1, R2015b, R2016b Programming Sapelo Up20.png
Matlab R2017b Programming Sapelo2 Up20.png
Mauve 2.4.0 Bioinformatics Sapelo Up20.png
Mauve 2015-02-13 Bioinformatics Sapelo2 Up20.png
Maven 3.5.2 Bioinformatics Sapelo2 Up20.png
MaxBin 2.1.1 Bioinformatics Sapelo Up20.png
MCL 14.137 Bioinformatics Sapelo2 Up20.png
MCScanX-transposed 0.8 Bioinformatics Sapelo Up20.png
MCScanX 0.8 Bioinformatics Sapelo Up20.png
MCScanX 0.8 Bioinformatics Sapelo2 Up20.png
MDEnergy 2.3 Chemistry Sapelo Up20.png
MEGA 7.0.26-1 Bioinformatics Sapelo2 Up20.png
Megahit 1.1.1 Bioinformatics Sapelo Up20.png
MEGAHIT 1.1.1, 1.1.3 Bioinformatics Sapelo2 Up20.png
MEGAN 6.4.3 Bioinformatics Sapelo Up20.png
MEME 4.10.2, 4.11.0 Bioinformatics Sapelo Up20.png
MEME 4.11.0, 5.0.0_1 Bioinformatics Sapelo2 Up20.png
Meraculous 2.0 Bioinformatics Sapelo Up20.png
Meraculous 2.2.5 Bioinformatics Sapelo2 Up20.png
Mercurial 3.9 Other Sapelo Up20.png
Mercurial 4.4.2 Other Sapelo2 Up20.png
Mesa 12.0.2, 17.3.6 Other Sapelo2 Up20.png
MET 7.0 Other Sapelo2 Up20.png
MetaBAT 20151110 Bioinformatics Sapelo Up20.png
Metal 20110325 Bioinformatics Sapelo Up20.png
Metaphlan2 2.0 Bioinformatics Sapelo Up20.png
metaSort 1.3 Bioinformatics Sapelo Up20.png
Metavelvet 1.2.02 Bioinformatics Sapelo Up20.png
MetavelvetSL 1.0 Bioinformatics Sapelo Up20.png
MethPipeline 0.1_120115 Bioinformatics Sapelo Up20.png
methylpy 08/25/2016 Bioinformatics Sapelo Up20.png
methylpy 1.2.9, 1.3.2 Bioinformatics Sapelo2 Up20.png
METIS 5.1.0 Other Sapelo2 Up20.png
MHAP 2.1.1 Bioinformatics Sapelo Up20.png
Migrate 3.6.11 Bioinformatics Sapelo Up20.png
minced 0.2.1 Bioinformatics Sapelo2 Up20.png
Miniconda3 4.4.10 Other Sapelo2 Up20.png
Minimac3 2.0.1 Bioinformatics Sapelo Up20.png
Minimap2 2.10 Bioinformatics Sapelo2 Up20.png
Minimap 0.2 Bioinformatics Sapelo Up20.png
miRanda aug2010 Bioinformatics Sapelo Up20.png
mirdeep-p 1.3 Bioinformatics Sapelo Up20.png
mirdeep-p 1.3 Bioinformatics Sapelo2 Up20.png
miRDeep2 0.0.9 Bioinformatics Sapelo Up20.png
miRDeep2 0.0.8 Bioinformatics Sapelo2 Up20.png
MISO 09132016 Bioinformatics Sapelo Up20.png
MITE-Hunter 11-2011 Bioinformatics Sapelo2 Up20.png
MKL 11.1, 11.2 Math Library Sapelo Up20.png
mlehot 1.8.16 Bioinformatics Sapelo Up20.png
MOABS 1.3.2 Bioinformatics Sapelo Up20.png
MOCAT 1.3r2 Bioinformatics Sapelo Up20.png
MOTHUR 1.37.5, 1.39.5 Bioinformatics Sapelo Up20.png
Mothur 1.39.5 Bioinformatics Sapelo2 Up20.png
motif 2.3.5, 2.3.8 Graphics Sapelo2 Up20.png
MP-EST 1.5 Bioinformatics Sapelo Up20.png
MPFR 3.1.2 Library Sapelo Up20.png
MPFRC++ 3.6.2 Library Sapelo Up20.png
Mplus 7.4 Statistics Sapelo Up20.png
MrBayes 3.2.6 Bioinformatics Sapelo Up20.png
MrBayes 3.2.6 Bioinformatics Sapelo2 Up20.png
MrDemuxy 1.2.0 Bioinformatics Sapelo Up20.png
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MultiMappingCounter 21-09-2017 Bioinformatics Sapelo Up20.png
MultiQC 1.5 Bioinformatics Sapelo2 Up20.png
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MUSCLE 3.8.31 Bioinformatics Sapelo Up20.png
MUSCLE 3.8 Bioinformatics Sapelo2 Up20.png
MuTect 1.1.5 Bioinformatics Sapelo Up20.png
MuTect 1.1.7 Bioinformatics Sapelo2 Up20.png
MVFtools 10112017 Bioinformatics Sapelo Up20.png
NAMD 2.11 Chemistry Sapelo Up20.png
NAMD 2.12 Chemistry Sapelo2 Up20.png
Nanocorr 5.9 Bioinformatics Sapelo2 Up20.png
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NCBI Blast 2.2.26 Bioinformatics Sapelo Up20.png
NCBIBLAST+ 2.7.1 Bioinformatics Sapelo Up20.png
Ncbi_tools++ 12.0.0 Bioinformatics Sapelo Up20.png
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NeEstimator 2.1 Bioinformatics Sapelo2 Up20.png
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Newbler 2.6 Bioinformatics Sapelo Up20.png
Newbler 3.0 Bioinformatics Sapelo2 Up20.png
NextGenMap 0.5.5 Bioinformatics Sapelo2 Up20.png
ngmlr 0.2.6-beta Bioinformatics Sapelo2 Up20.png
NGS-QC Toolkit 2.3.3 Bioinformatics Sapelo Up20.png
NGS 1.3.0 Bioinformatics Sapelo2 Up20.png
Ngsutils 0.5.9 Bioinformatics Sapelo Up20.png
nhPhyML 20180515 Bioinformatics Sapelo2 Up20.png
NiBabel 2.2.1 Other Sapelo2 Up20.png
nistats 0.0.1a0 Other Sapelo2 Up20.png
Nseg 20180530 Bioinformatics Sapelo2 Up20.png
NucleoATAC 0.3.4 Bioinformatics Sapelo2 Up20.png
NWCHEM 6.5 Chemistry Sapelo Up20.png
NxTrim v0.3.2-alpha Bioinformatics Sapelo Up20.png
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Octave 4.0.3 Programming Sapelo Up20.png
Oligotyping 2.1 Bioinformatics Sapelo Up20.png
OpenBUGS 3.2.3 Statistics Sapelo Up20.png
OpenBUGS 3.2.3 Statistics Sapelo2 Up20.png
OpenCV 2.4.13.3, 3.0 Other Sapelo Up20.png
OpenCV 3.4.1 Other Sapelo2 Up20.png
OpenJPEG 2.3.0 Other Sapelo2 Up20.png
OpenSlide 3.4.1 Other Sapelo2 Up20.png
opera 2.0.6 Bioinformatics Sapelo Up20.png
ORCA 3.0.3, 4.0.0 Chemistry Sapelo Up20.png
ORCA 3.0.3, 4.0.0.2, 4.0.1.2 Chemistry Sapelo2 Up20.png
OrfM 0.6.1 Bioinformatics Sapelo2 Up20.png
ORGanelle_ASeMbler 0.2.03 Bioinformatics Sapelo2 Up20.png
ORGASM 0.2.03 Bioinformatics Sapelo2 Up20.png
ORP 2.0.0 Bioinformatics Sapelo2 Up20.png
OrthoFiller 1.1.4 Bioinformatics Sapelo Up20.png
OrthoFinder 1.1.8 Bioinformatics Sapelo Up20.png
OrthoFinder 2.1.2 Bioinformatics Sapelo2 Up20.png
OrthoFinder 2.1.2 Bioinformatics Teaching Up20.png
PAGIT 1.64 Bioinformatics Sapelo2 Up20.png
palfinder 0.02.04 Bioinformatics Sapelo Up20.png
paml 4.8 Bioinformatics Sapelo Up20.png
PAML 4.9h Bioinformatics Sapelo2 Up20.png
PAML 4.9h Bioinformatics Teaching Up20.png
pandas 0.16.0 Other Sapelo Up20.png
PANDAseq 2.5 Bioinformatics Sapelo2 Up20.png
Pango 1.40.3, 1.41.1 Library Sapelo2 Up20.png
ParaFly 0.1.0 utility Sapelo Up20.png
Parsnp 1.2 Bioinformatics Sapelo2 Up20.png
PartitionFinder 2.1.1 Bioinformatics Sapelo2 Up20.png
PASA 2.3.3 Bioinformatics Sapelo2 Up20.png
PASTA 1.6.4 Bioinformatics Sapelo Up20.png
PASTA 1.8.2 Bioinformatics Sapelo2 Up20.png
Paup 4a147 Bioinformatics Sapelo Up20.png
PAUP 4a162_centos64_intel Bioinformatics Sapelo2 Up20.png
pbh5tools 0.8.0 Bioinformatics Sapelo2 Up20.png
PBLAT 2.0.0 Bioinformatics Sapelo2 Up20.png
PBSuite 15.8.24 Bioinformatics Sapelo Up20.png
PBSuite 15.8.24 Bioinformatics Sapelo2 Up20.png
PCRE 8.38, 8.39, 8.41 Library Sapelo2 Up20.png
Peakranger 1.18 Bioinformatics Sapelo Up20.png
PEAR 0.9.10-src Bioinformatics Sapelo Up20.png
PEAR 0.9.8 Bioinformatics Sapelo2 Up20.png
PePr 1.1.18 Bioinformatics Sapelo Up20.png
Perl 5.24.0-thread Programming Sapelo Up20.png
Perl 5.20.3, 5.24.0, 5.24.1, 5.26.0, 5.26.1 Programming Sapelo2 Up20.png
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PETSc 3.7.6 Math Library Sapelo Up20.png
PETSc 3.8.4 Math Library Sapelo2 Up20.png
PGDSpider 2.1.1.5 Bioinformatics Sapelo2 Up20.png
PGI Compilers 2014 Compiler Sapelo Up20.png
PHASE 2.1.1 Bioinformatics Sapelo Up20.png
phaser 1.2.0 Bioinformatics Sapelo Up20.png
phaser 1.2.0 Bioinformatics Sapelo2 Up20.png
PhaseTank 1.0 Bioinformatics Sapelo Up20.png
PhaseTank 1.0 Bioinformatics Sapelo2 Up20.png
Phobius 1.01 Bioinformatics Sapelo2 Up20.png
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Phycas 2.2.0 Bioinformatics Sapelo2 Up20.png
PHYLIP 3.697 Bioinformatics Sapelo2 Up20.png
PhyloBayes-MPI 1.7 Bioinformatics Sapelo Up20.png
PhyloBayes-MPI 20161021 Bioinformatics Sapelo2 Up20.png
PhyloCSF 20180919 Bioinformatics Sapelo2 Up20.png
PhyloGenie 11082017 Bioinformatics Sapelo Up20.png
PhyloNet 3.6.0 Bioinformatics Sapelo Up20.png
phyluce 1.5.0 Bioinformatics Sapelo Up20.png
Phyluce 1.6.1 Bioinformatics Sapelo2 Up20.png
PhyML 3.0 Bioinformatics Sapelo Up20.png
PhyML 3.3.20170530 Bioinformatics Sapelo2 Up20.png
picard 2.1.1, 2.4.1 Bioinformatics Sapelo Up20.png
picard 2.16.0 Bioinformatics Sapelo2 Up20.png
Picard 2.16.0 Bioinformatics Teaching Up20.png
picrust 1.1.0 Bioinformatics Sapelo Up20.png
PICRUSt 1.1.3 Bioinformatics Sapelo2 Up20.png
pigz 2.3.4 Other Sapelo Up20.png
pigz 2.3.3 Other Sapelo2 Up20.png
PILER 2.5 Bioinformatics Sapelo2 Up20.png
Pilon 1.21 Bioinformatics Sapelo Up20.png
Pilon 1.22 Bioinformatics Sapelo2 Up20.png
Pilon 1.22 Bioinformatics Teaching Up20.png
Pindel 0.2.5b8 Bioinformatics Sapelo Up20.png
pIRS 2.0.2 Bioinformatics Sapelo Up20.png
Pitchfork 09272017 Bioinformatics Sapelo Up20.png
platypus 0.8.1 Bioinformatics Sapelo Up20.png
PLEK 1.2 Bioinformatics Sapelo Up20.png
plink 1.07, 1.9-beta3 Bioinformatics Sapelo Up20.png
PLINK 1.07, 1.9b Bioinformatics Sapelo2 Up20.png
PLUMED 2.3.3 Chemistry Sapelo Up20.png
poretools 0.6.0 Bioinformatics Sapelo Up20.png
portaudio 19 Other Sapelo Up20.png
PRANK 170427 Bioinformatics Sapelo2 Up20.png
PRATT 2.1 Bioinformatics Sapelo Up20.png
prep-chem-src 1.5 Other Sapelo Up20.png
Primer3 2.0.0-alpha Bioinformatics Sapelo Up20.png
Primer3 2.3.7 Bioinformatics Sapelo2 Up20.png
PRINSEQ 0.20.4 Bioinformatics Sapelo Up20.png
PRINSEQ 0.20.4 Bioinformatics Sapelo2 Up20.png
ProbABEL 0.5.0 Bioinformatics Sapelo Up20.png
Prodigal 2.6.3 Bioinformatics Sapelo Up20.png
Prodigal 2.6.3 Bioinformatics Sapelo2 Up20.png
Prokka 1.11 Bioinformatics Sapelo Up20.png
Prokka 1.13 Bioinformatics Sapelo2 Up20.png
proovread 2.12 Bioinformatics Sapelo Up20.png
proovread 2.14.1 Bioinformatics Sapelo2 Up20.png
Proovread 2.14.1 Bioinformatics Teaching Up20.png
protobuf 2.4.1, 2.6.1, 3.0.0-beta1 Other Sapelo Up20.png
protobuf 3.3.0, 3.4.0 Other Sapelo2 Up20.png
Prottest3 3.4.2 Bioinformatics Sapelo Up20.png
pybedtools 09/22/2016 Bioinformatics Sapelo Up20.png
pybedtools 0.7.10 Bioinformatics Sapelo2 Up20.png
pyDNase 0.2.5 Bioinformatics Sapelo Up20.png
pydub 0.21.0 Other Sapelo Up20.png
pydub 0.22.1 Other Sapelo2 Up20.png
pyfasta 0.5.2 Bioinformatics Sapelo Up20.png
PyPy 2.7-5.10.0 Programming Sapelo Up20.png
PyPy 6.0.0 (2.7.14) Programming Sapelo2 Up20.png
pyRAD 3.0.64 Bioinformatics Sapelo Up20.png
Pysam 0.10.0, 0.13 Bioinformatics Sapelo2 Up20.png
Python 2.6.6, 2.7.8, 2.7.13, 3.5.2, 3.6.4 Programming Sapelo Up20.png
Python 2.7.12, 2.7.14, 3.4.3, 3.5.1 Programming Sapelo2 Up20.png
Python 3.6.4, 3.5.2, 2.7.14, 2.7.12 Programming Teaching Up20.png
PyTorch 0.1.9, 0.1.11 Other Sapelo Up20.png
PyTorch 0.3.1 Other Sapelo2 Up20.png
QIIME2 2018.2, 2018.4, 2018.6 Bioinformatics Sapelo2 Up20.png
QIIME2 2018.4, 2018.6 Bioinformatics Teaching Up20.png
Qiime 1.9.1 Bioinformatics Sapelo Up20.png
QIIME 1.9.1 Bioinformatics Sapelo2 Up20.png
QTLcartographer 1.17j Bioinformatics Sapelo2 Up20.png
Quake 0.3 Bioinformatics Sapelo Up20.png
Qualimap2 2.2.1 Bioinformatics Sapelo Up20.png
Qualimap2 2.2.1 Bioinformatics Sapelo2 Up20.png
Quantum Espresso 5.4.0 Chemistry Sapelo Up20.png
Quantum Espresso 6.2.0 Chemistry Sapelo2 Up20.png
QUAST 4.5 Bioinformatics Sapelo Up20.png
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R 3.4.4 Statistics Sapelo2 Up20.png
R 3.4.4 Statistics Teaching Up20.png
racon 20161214 Bioinformatics Sapelo Up20.png
racon 20180406 Bioinformatics Sapelo2 Up20.png
Randfold 2.0.1 Bioinformatics Sapelo Up20.png
randfold 2.0.1 Bioinformatics Sapelo2 Up20.png
RAPSearch2 2.23 Bioinformatics Sapelo Up20.png
RATT 10052017 Bioinformatics Sapelo Up20.png
RATT 20180710 Bioinformatics Sapelo2 Up20.png
RAxML 8.2.4 Bioinformatics Sapelo Up20.png
RAxML 8.2.4, 8.2.11 Bioinformatics Sapelo2 Up20.png
RAxML 8.2.11 Bioinformatics Teaching Up20.png
Ray 2.3.1 Bioinformatics Sapelo Up20.png
Ray 2.3.1 Bioinformatics Sapelo2 Up20.png
Rcorrector 1.0.2 Bioinformatics Sapelo2 Up20.png
RDPTools 2.2.0 Bioinformatics Sapelo Up20.png
READemption 0.3.7 Bioinformatics Sapelo Up20.png
REAPR 1.0.18 Bioinformatics Sapelo Up20.png
REAPR 1.0.18 Bioinformatics Sapelo2 Up20.png
RECON 1.08 Bioinformatics Sapelo2 Up20.png
RED 1.0 Bioinformatics Sapelo Up20.png
REPCLASS 1.0.1 Bioinformatics Sapelo Up20.png
repdenovo 02232017 Bioinformatics Sapelo Up20.png
RepeatExplorer-TAREAN 12/13/2016, 01/10/2017 Bioinformatics Sapelo Up20.png
RepeatExplorer 02/2015 Bioinformatics Sapelo Up20.png
Repeatmasker 4.0.5 Bioinformatics Sapelo Up20.png
RepeatMasker 4.0.5, 4.0.7 Bioinformatics Sapelo2 Up20.png
RepeatMasker 4.0.7 Bioinformatics Teaching Up20.png
Repeatmodeler 1.0.8 Bioinformatics Sapelo Up20.png
Repeatmodeler 1.0.11 Bioinformatics Sapelo2 Up20.png
RepeatModeler 1.0.11 Bioinformatics Teaching Up20.png
RepeatScout 1.05 Bioinformatics Sapelo2 Up20.png
RepeatScout 1.05 Bioinformatics Teaching Up20.png
REPET 2.5 Bioinformatics Sapelo2 Up20.png
RES-Scanner 20170726 Bioinformatics Sapelo Up20.png
Revbayes 1.0.5 Bioinformatics Sapelo Up20.png
RGT 0.11.2 Bioinformatics Sapelo Up20.png
rjags 4.6 Other Sapelo2 Up20.png
RMBlast 2.6.0 Bioinformatics Sapelo2 Up20.png
Rmpi 0.6-6 Programming Sapelo Up20.png
Rmpi 0.6-6 Programming Sapelo2 Up20.png
RNAmmer 1.2 Bioinformatics Sapelo Up20.png
RNAmmer 1.2 Bioinformatics Sapelo2 Up20.png
RNAple 0.2 Bioinformatics Sapelo Up20.png
Roary 3.8 Bioinformatics Sapelo Up20.png
Roary 3.12.0 Bioinformatics Sapelo2 Up20.png
Roms_tools 3.1.1 Other Sapelo Up20.png
Rosetta 2016.15.58628, 2017.26.59567 Chemistry Sapelo Up20.png
Rosetta 2017.45.59812 Chemistry Sapelo2 Up20.png
RSEM 1.2.20 Bioinformatics Sapelo Up20.png
RSEM 1.3.0 Bioinformatics Sapelo2 Up20.png
RSeQC 2.6.4 Bioinformatics Sapelo Up20.png
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Ruby 2.5.0 Programming Sapelo2 Up20.png
runBNG 1.03 Bioinformatics Sapelo2 Up20.png
Sabre 02/03/2017 Other Sapelo Up20.png
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Sage 8.0 Other Sapelo2 Up20.png
Salmon 0.6.1-pre Bioinformatics Sapelo Up20.png
Salmon 0.8.2 Bioinformatics Sapelo2 Up20.png
SALSA 2.0 Bioinformatics Sapelo2 Up20.png
sam2pairwise 1.0.0 Bioinformatics Sapelo Up20.png
samtools 1.3.1 1.6 Bioinformatics Sapelo Up20.png
SAMtools 0.1.19, 1.3.1, 1.6 Bioinformatics Sapelo2 Up20.png
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SATé 2.2.7 Bioinformatics Sapelo Up20.png
sbt 0.13.12, 1.0.2 Programming Sapelo Up20.png
sbt 1.1.1 Programming Sapelo2 Up20.png
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