Python-Teaching
Category
Programming
Program On
Teaching
Version
2.7.18, 3.7.4, 3.8.6, 3.9.6, 3.10.4
Author / Distributor
Description
"Python is a programming language that lets you work more quickly and integrate your systems more effectively." More details are at Python
Running Program
Please also see Python-Sapelo2 as that documentation applies to the teaching cluster as well.
To see all versions of Python installed on the cluster, use:
ml spider Python
For example:
Version 2.7.18
Installed in /apps/eb/Python/2.7.18-GCCcore-11.3.0
To use this version, please load the module with
ml Python/2.7.18-GCCcore-11.3.0
Version 3.10.4
Installed in /apps/eb/Python/3.10.4-GCCcore-11.3.0
To use this version, please load the module with
ml Python/3.10.4-GCCcore-11.3.0
Here is an example of a shell script, sub.sh, to run on the batch queue:
#!/bin/bash
#SBATCH --job-name=j_Python
#SBATCH --partition=batch
#SBATCH --mail-type=ALL
#SBATCH --mail-user=username@uga.edu
#SBATCH --ntasks=1
#SBATCH --mem=10gb
#SBATCH --time=08:00:00
#SBATCH --output=Python.%j.out
#SBATCH --error=Python.%j.err
cd $SLURM_SUBMIT_DIR
ml Python/3.10.4-GCCcore-1.3.0
python [options]
In the real submission script, at least all the above underlined values need to be reviewed or to be replaced by the proper values.
Please refer to Running_Jobs_on_the_teaching_cluster, Run X window Jobs and Run interactive Jobs for more details of running jobs at Teaching cluster.
Here is an example of job submission command:
sbatch ./sub.sh
Documentation
ml Python/3.10.4-GCCcore-11.3.0
python -h
usage: python [option] ... [-c cmd | -m mod | file | -] [arg] ...
Options and arguments (and corresponding environment variables):
-b : issue warnings about str(bytes_instance), str(bytearray_instance)
and comparing bytes/bytearray with str. (-bb: issue errors)
-B : don't write .pyc files on import; also PYTHONDONTWRITEBYTECODE=x
-c cmd : program passed in as string (terminates option list)
-d : turn on parser debugging output (for experts only, only works on
debug builds); also PYTHONDEBUG=x
-E : ignore PYTHON* environment variables (such as PYTHONPATH)
-h : print this help message and exit (also --help)
-i : inspect interactively after running script; forces a prompt even
if stdin does not appear to be a terminal; also PYTHONINSPECT=x
-I : isolate Python from the user's environment (implies -E and -s)
-m mod : run library module as a script (terminates option list)
-O : remove assert and __debug__-dependent statements; add .opt-1 before
.pyc extension; also PYTHONOPTIMIZE=x
-OO : do -O changes and also discard docstrings; add .opt-2 before
.pyc extension
-q : don't print version and copyright messages on interactive startup
-s : don't add user site directory to sys.path; also PYTHONNOUSERSITE
-S : don't imply 'import site' on initialization
-u : force the stdout and stderr streams to be unbuffered;
this option has no effect on stdin; also PYTHONUNBUFFERED=x
-v : verbose (trace import statements); also PYTHONVERBOSE=x
can be supplied multiple times to increase verbosity
-V : print the Python version number and exit (also --version)
when given twice, print more information about the build
-W arg : warning control; arg is action:message:category:module:lineno
also PYTHONWARNINGS=arg
-x : skip first line of source, allowing use of non-Unix forms of #!cmd
-X opt : set implementation-specific option. The following options are available:
-X faulthandler: enable faulthandler
-X showrefcount: output the total reference count and number of used
memory blocks when the program finishes or after each statement in the
interactive interpreter. This only works on debug builds
-X tracemalloc: start tracing Python memory allocations using the
tracemalloc module. By default, only the most recent frame is stored in a
traceback of a trace. Use -X tracemalloc=NFRAME to start tracing with a
traceback limit of NFRAME frames
-X importtime: show how long each import takes. It shows module name,
cumulative time (including nested imports) and self time (excluding
nested imports). Note that its output may be broken in multi-threaded
application. Typical usage is python3 -X importtime -c 'import asyncio'
-X dev: enable CPython's "development mode", introducing additional runtime
checks which are too expensive to be enabled by default. Effect of the
developer mode:
* Add default warning filter, as -W default
* Install debug hooks on memory allocators: see the PyMem_SetupDebugHooks() C function
* Enable the faulthandler module to dump the Python traceback on a crash
* Enable asyncio debug mode
* Set the dev_mode attribute of sys.flags to True
* io.IOBase destructor logs close() exceptions
-X utf8: enable UTF-8 mode for operating system interfaces, overriding the default
locale-aware mode. -X utf8=0 explicitly disables UTF-8 mode (even when it would
otherwise activate automatically)
-X pycache_prefix=PATH: enable writing .pyc files to a parallel tree rooted at the
given directory instead of to the code tree
-X warn_default_encoding: enable opt-in EncodingWarning for 'encoding=None'
--check-hash-based-pycs always|default|never:
control how Python invalidates hash-based .pyc files
file : program read from script file
- : program read from stdin (default; interactive mode if a tty)
arg ...: arguments passed to program in sys.argv[1:]
Other environment variables:
PYTHONSTARTUP: file executed on interactive startup (no default)
PYTHONPATH : ':'-separated list of directories prefixed to the
default module search path. The result is sys.path.
PYTHONHOME : alternate <prefix> directory (or <prefix>:<exec_prefix>).
The default module search path uses <prefix>/lib/pythonX.X.
PYTHONPLATLIBDIR : override sys.platlibdir.
PYTHONCASEOK : ignore case in 'import' statements (Windows).
PYTHONUTF8: if set to 1, enable the UTF-8 mode.
PYTHONIOENCODING: Encoding[:errors] used for stdin/stdout/stderr.
PYTHONFAULTHANDLER: dump the Python traceback on fatal errors.
PYTHONHASHSEED: if this variable is set to 'random', a random value is used
to seed the hashes of str and bytes objects. It can also be set to an
integer in the range [0,4294967295] to get hash values with a
predictable seed.
PYTHONMALLOC: set the Python memory allocators and/or install debug hooks
on Python memory allocators. Use PYTHONMALLOC=debug to install debug
hooks.
PYTHONCOERCECLOCALE: if this variable is set to 0, it disables the locale
coercion behavior. Use PYTHONCOERCECLOCALE=warn to request display of
locale coercion and locale compatibility warnings on stderr.
PYTHONBREAKPOINT: if this variable is set to 0, it disables the default
debugger. It can be set to the callable of your debugger of choice.
PYTHONDEVMODE: enable the development mode.
PYTHONPYCACHEPREFIX: root directory for bytecode cache (pyc) files.
PYTHONWARNDEFAULTENCODING: enable opt-in EncodingWarning for 'encoding=None'.
Installation
Source code is obtained from Python
System
64-bit Linux