BLAST Databases-Sapelo2

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Revision as of 08:30, 5 June 2020 by Shtsai (talk | contribs)
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Blast database - version 4

Each database is located at a directory with name pattern as /db/ncbiblast/dbname/month-date-year, where dbname is the name of the database, such as nr, nt, taxdb, refseq_rna, refseq_protein, mouse_genome, human_genome, swissprot, etc.

For example, an nr database downloaded on June 04, 2020 will be available in /db/ncbiblast/nr/06042020.

Available databases:

/db/ncbiblast/human_genome/06042020
/db/ncbiblast/mouse_genome/06042020
/db/ncbiblast/nr/06042020
/db/ncbiblast/nt/06042020
/db/ncbiblast/refseq_rna/06042020
/db/ncbiblast/refseq_protein/06042020
/db/ncbiblast/swissprot/06042020
/db/ncbiblast/taxdb/06042020


Blast database - version 5

Each database is located at a directory with name pattern as /db/ncbiblast.v5/dbname, where dbname is the name of the database, such as nr, nt, taxdb, refseq_rna, swissprot, etc.

For example, an nr database downloaded on June 04, 2020 will be available in /db/ncbiblast.v5/nr


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