Freebayes-Teaching

From Research Computing Center Wiki
Revision as of 14:44, 26 November 2018 by Moses (talk | contribs) (Created page with "<div class="gscript2"> <nowiki>#</nowiki>!/bin/bash<br> <nowiki>#</nowiki>SBATCH --job-name=j_GAG<br> <nowiki>#</nowiki>SBATCH --partition=batch<br> <nowiki>#</nowiki...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

#!/bin/bash
#SBATCH --job-name=j_GAG
#SBATCH --partition=batch
#SBATCH --mail-type=ALL
#SBATCH --mail-user=username@uga.edu
#SBATCH --ntasks=1
#SBATCH --mem=10gb
#SBATCH --time=08:00:00
#SBATCH --output=GAG.%j.out
#SBATCH --error=GAG.%j.err

cd $SLURM_SUBMIT_DIR
ml GAG/2.0.1-foss-2016b
python /usr/local/apps/eb/GAG/2.0.1-foss-2016b/gag.py [options]