Installed Software List
Last updated 2016-02-11.
Note: Click on the icons to the right of the column headings to sort the table.
0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Name
|
Version
|
Category
|
Cluster
|
|
454 Software |
|
Bioinformatics |
Zcluster |
|
a5-miseq |
20140604 |
Bioinformatics |
Zcluster |
|
aaarf |
1.0.0 |
Bioinformatics |
Zcluster |
|
ABINIT |
6.12.1 |
Chemistry |
Zcluster |
|
ABySS |
1.9.0 |
Bioinformatics |
Sapelo |
|
ABySS |
1.9.0 |
Bioinformatics |
Zcluster |
|
ACT |
03/27/2013 |
Bioinformatics |
Zcluster |
|
ADMIXTOOLS |
1.1 |
Bioinformatics |
Zcluster |
|
Admixture |
1.22 |
Bioinformatics |
Zcluster |
|
AFNI |
2013.04.26 |
Other |
Zcluster |
|
ALLPATHS-LG |
47907 |
Bioinformatics |
Zcluster |
|
AMBER |
14 |
Chemistry |
Sapelo |
|
AMBER |
11, 12, 14 |
Chemistry |
Zcluster |
|
amos |
3.1.0 |
Bioinformatics |
Zcluster |
|
AmpliconNoise |
1.25 |
Bioinformatics |
Zcluster |
|
Anaconda |
2.2.0, 3-2.2.0 |
Programming |
Sapelo |
|
Anaconda |
2.3.0, 3-2.2.0 |
Programming |
Zcluster |
|
Anduril |
1.2.23 |
Bioinformatics |
Zcluster |
|
ANNOVAR |
2015Mar22 |
Bioinformatics |
Zcluster |
|
apache-ant |
1.9.6 |
Other |
Sapelo |
|
ARB |
6.0.2 |
Bioinformatics |
Zcluster |
|
Arlequin |
3.5.1.3 |
Bioinformatics |
Zcluster |
|
Aspera |
3.1.0.67054 |
Other |
Zcluster |
|
AStalavista |
3.2 |
Bioinformatics |
Sapelo |
|
Atlas2 |
1.4.3 r158 |
Bioinformatics |
Zcluster |
|
AUGUSTUS |
2.5.5 |
Bioinformatics |
Zcluster |
|
bam2fastq |
1.1.0 |
Bioinformatics |
Zcluster |
|
Bamtools |
2.4.0 |
Bioinformatics |
Sapelo |
|
Banjo |
2.2.0 |
Bioinformatics |
Zcluster |
|
Batchsub |
1.0 |
Bioinformatics |
Zcluster |
|
BayeScan |
2.1 |
Bioinformatics |
Zcluster |
|
BBMap |
35.66 |
Bioinformatics |
Zcluster |
|
bcl2fastq |
2.16.0.10 |
Bioinformatics |
Sapelo |
|
bcl2fastq |
2.16.0.10 |
Bioinformatics |
Zcluster |
|
bcl2fastq-brwnj |
10262015 |
Bioinformatics |
Zcluster |
|
BEAST |
2.3.2 |
Bioinformatics |
Zcluster |
|
BEDops |
2.4.14 |
Bioinformatics |
Sapelo |
|
BEDTools |
2.25.0 |
Bioinformatics |
Sapelo |
|
BEDTools |
2.25.0 |
Bioinformatics |
Zcluster |
|
BEST |
2.3.1 |
Bioinformatics |
Zcluster |
|
bfast |
0.7.0 |
Bioinformatics |
Zcluster |
|
Bio++ Program Suite |
2.2.0 |
Bioinformatics |
Zcluster |
|
Bioconductor |
2.11, 2.13 |
Bioinformatics |
Zcluster |
|
BioPerl |
1.6.923 |
Bioinformatics |
Sapelo |
|
BioPerl |
1.61 |
Bioinformatics |
Zcluster |
|
biopy |
0.1.8 |
Bioinformatics |
Zcluster |
|
BioPython |
1.64 |
Bioinformatics |
Zcluster |
|
biotoolbox |
1.22 |
Bioinformatics |
Zcluster |
|
Bismark Bisulfite Mapper |
0.14.0 |
Bioinformatics |
Zcluster |
|
BiSS |
0.0.1 |
Bioinformatics |
Zcluster |
|
BLAS |
3.0 |
Math Library |
Zcluster |
|
BLASR |
1.3.1 |
Bioinformatics |
Zcluster |
|
Blat |
36 |
Bioinformatics |
Sapelo |
|
Blat |
3.5 |
Bioinformatics |
Zcluster |
|
BMGE |
1.1 |
Bioinformatics |
Zcluster |
|
Boost |
1.47.0, 1.57.0, 1.59.0 |
Library |
Sapelo |
|
Boost |
1.54.0 |
Library |
Zcluster |
|
bowtie |
1.1.1 |
Bioinformatics |
Sapelo |
|
bowtie |
1.1.0 |
Bioinformatics |
Zcluster |
|
bowtie2 |
2.2.4 |
Bioinformatics |
Sapelo |
|
bowtie2 |
2.2.3 |
Bioinformatics |
Zcluster |
|
BP&P |
2.2, 3, 3.1 |
Bioinformatics |
Zcluster |
|
breakdancer |
1.1.2_2013_03_08 |
Bioinformatics |
Zcluster |
|
bridger |
2014-12-01 |
Bioinformatics |
Zcluster |
|
brownie |
2.1.2 |
Bioinformatics |
Zcluster |
|
BS Seeker |
Dec 113 |
Bioinformatics |
Zcluster |
|
BS Seeker2 |
Oct 30 2013 |
Bioinformatics |
Zcluster |
|
BUCKy |
1.4.3 |
Bioinformatics |
Zcluster |
|
Burrows-Wheeler Aligner (BWA) |
0.7.10 |
Bioinformatics |
Sapelo |
|
Burrows-Wheeler Aligner (BWA) |
0.7.10 |
Bioinformatics |
Zcluster |
|
bx-python |
06/24/2013 |
Bioinformatics |
Zcluster |
|
cadaver |
0.23.3 |
Bioinformatics |
Zcluster |
|
Cafe |
3.1 |
Bioinformatics |
Zcluster |
|
Caffe |
12.04.2015 |
Other |
Sapelo |
|
Caffe |
11.26.2014 |
Other |
Zcluster |
|
canu |
1.0 |
Bioinformatics |
Sapelo |
|
CAP-miRSeq |
01/2014 |
Bioinformatics |
Zcluster |
|
cap3 |
03/09/2015 |
Bioinformatics |
Sapelo |
|
cap3 |
10/2011 |
Bioinformatics |
Zcluster |
|
casava |
1.8.2 |
Bioinformatics |
Zcluster |
|
cblas |
3.0 |
Math Library |
Zcluster |
|
cd-hit |
4.6.1 |
Bioinformatics |
Zcluster |
|
cdbfasta |
04282012 |
Bioinformatics |
Zcluster |
|
cdbtools |
06172013 |
Bioinformatics |
Zcluster |
|
CEAS |
1.0.2 |
Bioinformatics |
Zcluster |
|
CEGMA |
2.5 |
Bioinformatics |
Zcluster |
|
celera |
8.1 |
Bioinformatics |
Zcluster |
|
CFOUR |
1.2 |
Chemistry |
Sapelo |
|
CFOUR |
beta, 1.2 |
Chemistry |
Zcluster |
|
CGAT |
0.2.4 |
Bioinformatics |
Sapelo |
|
CheckM |
1.0.5 |
Bioinformatics |
Sapelo |
|
CheckM |
1.0.5 |
Bioinformatics |
Zcluster |
|
ChromHMM |
1.0 |
Bioinformatics |
Zcluster |
|
circoletto |
21.10.13 |
Bioinformatics |
Zcluster |
|
circos |
0.64 |
Bioinformatics |
Zcluster |
|
cisgenome |
2.0 |
Bioinformatics |
Zcluster |
|
CLAPACK |
3.2.1 |
Math Library |
Zcluster |
|
CLUMPP |
1.1.2 |
Bioinformatics |
Zcluster |
|
Clustal-Omega |
1.2.1 |
Bioinformatics |
Zcluster |
|
ClustalW |
2.1 |
Bioinformatics |
Zcluster |
|
CLUSTER |
3.0 |
Bioinformatics |
Zcluster |
|
cmake |
2.8.12.2, 3.0.2 |
Other |
Sapelo |
|
CNVnator |
0.2.7 |
Bioinformatics |
Zcluster |
|
cnv-seq |
0.2-7 |
Bioinformatics |
Zcluster |
|
Coding Potential Calculator |
0.9-r2 |
Bioinformatics |
Zcluster |
|
CoMap |
1.4.1 |
Bioinformatics |
Zcluster |
|
Conclustador |
0.4a |
Bioinformatics |
Zcluster |
|
Consed |
28.0 |
Bioinformatics |
Zcluster |
|
CONSEL |
v0.20 |
Bioinformatics |
Zcluster |
|
CORMA |
5.21 |
Chemistry |
Zcluster |
|
cortex_con |
0.04c |
Bioinformatics |
Zcluster |
|
cortex_var |
1.0.5.3 |
Bioinformatics |
Zcluster |
|
Count |
2010-04-02 |
Bioinformatics |
Zcluster |
|
CRB-BLAST |
0.3.2 |
Bioinformatics |
Zcluster |
|
CREST |
1.0 |
Bioinformatics |
Zcluster |
|
CrossMap |
0.1.5 |
Other |
Zcluster |
|
ctrax |
0.3.2 |
Other |
Zcluster |
|
CUDA |
5.0.35, 6.5.14 |
Programming |
Sapelo |
|
CUDA |
4.0.17, 4.2.9, 5.0.35, 6.0.37, 6.5.14 |
Programming |
Zcluster |
|
cufflinks |
2.2.1 |
Bioinformatics |
Sapelo |
|
cufflinks |
2.2.1 |
Bioinformatics |
Zcluster |
|
cutadapt |
1.9.dev1 |
Bioinformatics |
Sapelo |
|
cutadapt |
1.9.dev1 |
Bioinformatics |
Zcluster |
|
CWEB |
3.64 |
Other |
Zcluster |
|
Danpos2 |
2.2.2 |
Bioinformatics |
Zcluster |
|
datamash |
1.0.7 |
Other |
Sapelo |
|
datamash |
1.0.6 |
Other |
Zcluster |
|
Davinci |
2.09 |
Bioinformatics |
Zcluster |
|
DBG2OLC |
04062015 |
Bioinformatics |
Zcluster |
|
ddRADseq |
0.01 |
Bioinformatics |
Zcluster |
|
DeconSeq |
0.4.3 |
Bioinformatics |
Zcluster |
|
deepnet |
20151013 |
Other |
Sapelo |
|
deeptools |
1.6 |
Bioinformatics |
Zcluster |
|
deepnet |
20150820 |
Other |
Zcluster |
|
DELLY |
0.5.5 |
Bioinformatics |
Zcluster |
|
demuxipy |
1.0 |
Bioinformatics |
Zcluster |
|
dendropy |
3.12.0 |
Bioinformatics |
Sapelo |
|
detect-NAHR |
2015.09.16 |
Bioinformatics |
Sapelo |
|
DETONATE |
20140123 |
Bioinformatics |
Zcluster |
|
DIAMOND |
0.7.9 |
Bioinformatics |
Sapelo |
|
DIAMOND |
0.6.12 |
Bioinformatics |
Zcluster |
|
DISCOVAR |
49856 |
Bioinformatics |
Zcluster |
|
diyabc |
2.0.4 |
Bioinformatics |
Zcluster |
|
DLCoal |
1.0 |
Bioinformatics |
Zcluster |
|
dnasam |
20100621 |
Bioinformatics |
Zcluster |
|
dDocent |
1.2 |
Bioinformatics |
Zcluster |
|
drmma |
0.5 |
Other |
Zcluster |
|
ea-utils |
1.1.2-822 |
Bioinformatics |
Zcluster |
|
eclipse |
4.3.1 |
Other, Programming |
Zcluster |
|
ECTools |
08/18/2014 |
Other, Programming |
Zcluster |
|
edena |
v3.130110 |
Bioinformatics |
Zcluster |
|
EDGE-pro |
1.3.1 |
Bioinformatics |
Zcluster |
|
editag |
1.1 |
Bioinformatics |
Zcluster |
|
EMBOSS |
6.5.7 |
Bioinformatics |
Zcluster |
|
emirge |
1.0 |
Bioinformatics |
Zcluster |
|
emmax |
beta-07Mar2010 |
Bioinformatics |
Zcluster |
|
emmix |
1.3 |
Bioinformatics |
Zcluster |
|
ensembl-tools |
76 |
Bioinformatics |
Zcluster |
|
ESTscan |
3.0.3 |
Bioinformatics |
Zcluster |
|
evm (EVidenceModeler) |
r2012-06-25 |
Bioinformatics |
Zcluster |
|
exabayes |
1.4.1 |
Bioinformatics |
Sapelo |
|
exabayes |
1.2.1 |
Bioinformatics |
Zcluster |
|
ExaML |
3.0.11 |
Bioinformatics |
Sapelo |
|
ExaML |
315576 |
Bioinformatics |
Zcluster |
|
exonerate |
2.2.0 |
Bioinformatics |
Zcluster |
|
express |
1.5.1 |
Bioinformatics |
Zcluster |
|
FALCON |
0.4.0 |
Bioinformatics |
Sapelo |
|
FALCON |
0.4.0 |
Bioinformatics |
Zcluster |
|
FAR |
2.15 |
Bioinformatics |
Zcluster |
|
FASTA |
36 |
Bioinformatics |
Zcluster |
|
fasta format cleaner |
1.0 |
Bioinformatics |
Zcluster |
|
fastphase |
1.4.0 |
Bioinformatics |
Sapelo |
|
fastphase |
1.4.0 |
Bioinformatics |
Zcluster |
|
FastQC |
0.11.4 |
Bioinformatics |
Sapelo |
|
FastQC |
0.11.4 |
Bioinformatics |
Zcluster |
|
FastTree |
2.1.8 |
Bioinformatics |
Zcluster |
|
FastX |
0.0.13.2, 0.0.14 |
Bioinformatics |
Sapelo |
|
FastX |
0.0.13.2, 0.0.14 |
Bioinformatics |
Zcluster |
|
FastUniq |
1.1 |
Bioinformatics |
Zcluster |
|
FCP |
1.0.4 |
Bioinformatics |
Zcluster |
|
FFmpeg |
0.10.2 |
Other |
Zcluster |
|
FFTbor |
11.21.2014 |
Bioinformatics |
Zcluster |
|
FFTW |
2.1.5, 3.3.4 |
Math Library |
Sapelo |
|
FFTW |
2.1.5, 3.3.0, 3.3.3 |
Math Library |
Zcluster |
|
Fiji |
2015/12/09 |
Bioinformatics |
Zcluster |
|
FIRE |
1.1 |
Bioinformatics |
Zcluster |
|
FitModel |
20140407 |
Bioinformatics |
Zcluster |
|
FLASH |
1.2.11 |
Bioinformatics |
Zcluster |
|
Flexbar |
2.4 |
Bioinformatics |
Zcluster |
|
FragStats |
2.0 |
Other |
Zcluster |
|
Freebayes |
1.0.1 |
Bioinformatics |
Sapelo |
|
Freebayes |
1.0.0 |
Bioinformatics |
Zcluster |
|
F-Seq |
1.84 |
Bioinformatics |
Zcluster |
|
Fsl |
5.0.4 |
Bioinformatics |
Zcluster |
|
gam-ngs |
10/8/2013 |
Bioinformatics |
Zcluster |
|
GAMESS |
5Dec2014 |
Chemistry |
Sapelo |
|
GAMESS |
May2012R1 with XMVB 2.0, May2013R1, 5Dec2014 |
Chemistry |
Zcluster |
|
GapFiller |
1.11 |
Bioinformatics |
Zcluster |
|
garli |
2.01 |
Bioinformatics |
Zcluster |
|
gatk |
3.5 |
Bioinformatics |
Sapelo |
|
gatk |
3.5 |
Bioinformatics |
Zcluster |
|
GAUSSIAN09 |
09 |
Chemistry |
Zcluster |
|
GaussView |
5 |
Chemistry |
Zcluster |
|
Gblocks |
0.91b |
Bioinformatics |
Zcluster |
|
GBSX |
1.1.4 |
Bioinformatics |
Zcluster |
|
GDB |
7.0.1 |
Debugger |
Zcluster |
|
GEM |
3rd pre-release |
Bioinformatics |
Zcluster |
|
GEMMA |
0.95alpha |
Bioinformatics |
Zcluster |
|
GeneMark |
4.21 |
Bioinformatics |
Zcluster |
|
Genome |
Phred version: 0.071220.c |
Bioinformatics |
Zcluster |
|
GenomeMapper |
0.4.4 (Version for SHORE/WMD3) |
Bioinformatics |
Zcluster |
|
GenomeTools |
1.5.1 |
Bioinformatics |
Zcluster |
|
GenomicConsensus |
0.9.0 |
Bioinformatics |
Zcluster |
|
Gingr |
1.0 |
Other |
Zcluster |
|
git |
1.7.1, 2.7.0 |
Other |
Sapelo |
|
git |
1.7.6, 1.7.11.3, 2.0.0 |
Other |
Zcluster |
|
GKIN |
1.1 |
Bioinformatics |
Zcluster |
|
Glimmer |
3.0.2 |
Bioinformatics |
Zcluster |
|
GlimmerHMM |
3.0.1 |
Bioinformatics |
Zcluster |
|
gmap-gsnap |
2013-09-11 |
Bioinformatics |
Zcluster |
|
GMP |
4.3.1, 6.0.0 |
Library |
Sapelo |
|
GMPFRXX |
20081116 |
Library |
Sapelo |
|
GNU Compilers |
4.4.7, 4.7.4, 5.3.0 |
Compiler |
Sapelo |
|
GNU Compilers |
4.1.2, 4.4.7, 4.5.3, 4.7.1, 5.3.0 |
Compiler |
Zcluster |
|
GNUMAP |
3.0.2 |
Bioinformatics |
Zcluster |
|
gnuplot |
4.0, 4.6.0 |
Graphics |
Zcluster |
|
gprof |
2.17 |
Profiler |
Zcluster |
|
gpu-blast |
1.1 with ncbi-blast-2.2.25+ |
Bioinformatics |
Zcluster |
|
grace |
5.1.25 |
Graphics |
Sapelo |
|
grace |
5.1.22 |
Graphics |
Zcluster |
|
GrADS |
2.1a3 |
Other |
Sapelo |
|
GraPhlAn |
0.9.7 |
Graphics |
Zcluster |
|
Gromacs |
5.0.2 |
Chemistry |
Sapelo |
|
Gromacs |
4.5.5, 4.6.1 |
Chemistry |
Zcluster |
|
GSL |
1.16 |
Math Library |
Sapelo |
|
GSL |
1.9, 1.15 |
Math Library |
Zcluster |
|
gss |
|
Bioinformatics |
Zcluster |
|
Haplomerger2 |
20151124 |
Bioinformatics |
Zcluster |
|
Hapmix |
2 |
Bioinformatics |
Zcluster |
|
HARP |
130306_105556 |
Bioinformatics |
Zcluster |
|
HDF5 |
1.8.6, 1.8.14 |
Library |
Sapelo |
|
HDF5 |
1.6.4, 1.8.9 |
Library |
Zcluster |
|
HH-Suite |
2.0.16 |
Library |
Zcluster |
|
Hmmer |
3.1b2 |
Bioinformatics |
Sapelo |
|
Hmmer |
3.1b1 |
Bioinformatics |
Zcluster |
|
Homer |
4.3 |
Bioinformatics |
Zcluster |
|
htseq |
0.5.3p3, 0.6.1p1 |
Bioinformatics |
Zcluster |
|
HyPhy |
2.2.1 |
Bioinformatics |
Zcluster |
|
IDBA-MT |
1.1.0 |
Bioinformatics |
Zcluster |
|
IDBA |
1.1.2 |
Bioinformatics |
Sapelo |
|
IDBA-UD |
1.1.1 |
Bioinformatics |
Zcluster |
|
igb |
6.7.3 |
Bioinformatics |
Zcluster |
|
IGV |
2.1.23 |
Bioinformatics |
Zcluster |
|
IGVTools |
2.3.14 |
Bioinformatics |
Zcluster |
|
IMa2 |
8.27.12 |
Bioinformatics |
Zcluster |
|
indel-Seq-Gen |
2.02 |
Bioinformatics |
Zcluster |
|
Infernal |
1.1.1 |
Bioinformatics |
Zcluster |
|
InStruct |
3.2.09 |
Bioinformatics |
Zcluster |
|
Intel Compilers |
14.0.0, 15.0.2 |
Compiler |
Sapelo |
|
Intel Compilers |
2013 SP1 |
Compiler |
Zcluster |
|
iprscan (InterProScan) |
5.16-55.0 |
Bioinformatics |
Sapelo |
|
iprscan (InterProScan) |
5.9-50.0 |
Bioinformatics |
Zcluster |
|
iscan |
1.0.0 |
Bioinformatics |
Zcluster |
|
ITK |
3.20.1 |
Other |
Zcluster |
|
JAGS |
3.4.0, 4.1.0 |
Statistics |
Sapelo |
|
JAGS |
3.3.0, 4.1.0 |
Statistics |
Zcluster |
|
JasPer |
1.900.1 |
Other |
Sapelo |
|
JasPer |
1.900.1 |
Other |
Zcluster |
|
Jellyfish |
2.2.3 |
Bioinformatics |
Sapelo |
|
Jellyfish |
2.1.1 |
Bioinformatics |
Zcluster |
|
JModelTest |
2.1.4 |
Bioinformatics |
Zcluster |
|
Julia |
0.3.0-beta, 0.3.3 |
Programming |
Zcluster |
|
k-link |
03 27, 2009 |
Bioinformatics |
Zcluster |
|
Kat |
1.0.6 |
Bioinformatics |
Zcluster |
|
KisSplice |
2.2.1 |
Bioinformatics |
Zcluster |
|
Kraken |
0.10.5-beta |
Bioinformatics |
Zcluster |
|
KmerGenie |
1.5393 |
Bioinformatics |
Zcluster |
|
LAMMPS |
16Aug13, 5Sep14, 10Aug15, 7Dec15 |
Chemistry |
Sapelo |
|
LAMMPS |
23Sep13, 5Sep14, 10Aug15 |
Chemistry |
Zcluster |
|
LAPACK |
3.0, 3.4.2 |
Math Library |
Zcluster |
|
LASTZ |
1.03.02 |
Bioinformatics |
Zcluster |
|
LCS |
1.0 |
Bioinformatics |
Zcluster |
|
LDDist |
1.3.2 |
Bioinformatics |
Zcluster |
|
libsequence |
1.7.4 |
Bioinformatics |
Zcluster |
|
LIBSVM |
3.21 |
Other |
Sapelo |
|
LIBSVM |
3.17 |
Other |
Zcluster |
|
Lighter |
06192015 |
Bioinformatics |
Zcluster |
|
LLVM-Clang |
3.1 |
Compiler |
Zcluster |
|
lmod |
5.8 |
Other |
Sapelo |
|
LoFreq |
2.1.2 |
Bioinformatics |
Zcluster |
|
lsa |
11182011 |
Bioinformatics |
Zcluster |
|
macs |
1.4.2 |
Bioinformatics |
Zcluster |
|
macs2 |
2.1.0.20140616 |
Bioinformatics |
Zcluster |
|
Mafft |
7.029-e |
Bioinformatics |
Zcluster |
|
Magma |
2.21-3 |
Other |
Zcluster |
|
maker |
2.31.7 |
Bioinformatics |
Zcluster |
|
Maple |
16 |
Other, Programming, Graphics |
Zcluster |
|
MapSplice2 |
2.1.7 |
Bioinformatics |
Zcluster |
|
MAQ |
0.7.1 |
Bioinformatics |
Zcluster |
|
MARDIGRAS |
3.21 |
Chemistry |
Zcluster |
|
MaSuRCA |
2.3.0 |
Bioinformatics |
Zcluster |
|
MATS |
3.0.9 |
Bioinformatics |
Zcluster |
|
Mathematica |
9.0 (currently not available) |
Other, Programming , Graphics |
Zcluster |
|
Matlab |
R2015b (8.6) |
Other, Programming, Graphics |
Sapelo |
|
MatLab |
R2012a (7.14), R2013a (8.1) |
Other, Programming, Graphics |
Zcluster |
|
Mauve |
2.3.1 |
Bioinformatics |
Zcluster |
|
MAVEN-genome |
682, 769, 774 |
Bioinformatics |
Zcluster |
|
MCScanX |
10/18/2013 |
Bioinformatics |
Zcluster |
|
MCL |
12-135 |
Bioinformatics |
Zcluster |
|
MEAD |
2.2.9 |
Chemistry |
Zcluster |
|
Megahit |
1.0.1 |
Bioinformatics |
Sapelo |
|
Megahit |
1.0.2 |
Bioinformatics |
Zcluster |
|
MeGAMerge |
1.0 |
Bioinformatics |
Zcluster |
|
megan |
5.5.3 |
Bioinformatics |
Zcluster |
|
MEME |
4.10.2, 4.11.0 |
Bioinformatics |
Sapelo |
|
MEME |
4.10.0 |
Bioinformatics |
Zcluster |
|
MEMo |
1.1 |
Bioinformatics |
Zcluster |
|
MetaMOS |
v1.5rc1 |
Bioinformatics |
Zcluster |
|
MetaBAT |
20151110 |
Bioinformatics |
Sapelo |
|
Metavelvet |
1.2.02 |
Bioinformatics |
Sapelo |
|
Metavelvet |
1.2.02 |
Bioinformatics |
Zcluster |
|
MetavelvetSL |
1.0 |
Bioinformatics |
Sapelo |
|
MethPipeline |
0.1_120115 |
Bioinformatics |
Sapelo |
|
METIS |
4.0.3, 5.1.0 |
Math Library |
Zcluster |
|
MGA |
1.5.4 |
Bioinformatics |
Zcluster |
|
Migrate |
3.5.1 |
Bioinformatics |
Zcluster |
|
Minia |
1.4683 |
Bioinformatics |
Zcluster |
|
MIRA |
3.9.9 |
Bioinformatics |
Zcluster |
|
MITE-Hunter |
11-2011 |
Bioinformatics |
Zcluster |
|
MixMapper |
2.0 |
Bioinformatics |
Zcluster |
|
MKL |
11.1, 11.2 |
Math Library |
Sapelo |
|
MKL |
11.0 |
Math Library |
Zcluster |
|
MOABS |
1.3.2 |
Bioinformatics |
Sapelo |
|
MOABS |
1.2.9 |
Bioinformatics |
Zcluster |
|
MOCAT |
1.3r2 |
Bioinformatics |
Sapelo |
|
MONO |
3.0.3 |
Other, Programming |
Zcluster |
|
MOSAIK |
2.2.24 |
Bioinformatics |
Zcluster |
|
MOTECC qmdcp |
90 |
Chemistry |
Zcluster |
|
MOTHUR |
1.35.1 |
Bioinformatics |
Zcluster |
|
MP-EST |
1.2 |
Bioinformatics |
Zcluster |
|
mpeg2vidcodec |
12 |
Category:Other |
Zcluster |
|
mpi4py |
1.3 |
Programming |
Zcluster |
|
mpiblast |
1.6.0 |
Bioinformatics |
Zcluster |
|
MPFR |
3.1.2 |
Library |
Sapelo |
|
MPFRC++ |
3.6.2 |
Library |
Sapelo |
|
MrBayes |
3.2.5 |
Bioinformatics |
Zcluster |
|
mrfast |
2.5.0.4 |
Bioinformatics |
Zcluster |
|
MSA |
3.8.1b |
Bioinformatics |
Zcluster |
|
MSG |
0.4.3 |
Bioinformatics |
Zcluster |
|
MultiLoc2 |
26-10-2009 |
Bioinformatics |
Sapelo |
|
MultiSplice |
0.10 |
Bioinformatics |
Zcluster |
|
MUMmer |
3.22 |
Bioinformatics |
Zcluster |
|
MUMPS |
4.10.0 |
Math Library |
Zcluster |
|
MUSCLE |
3.8.31 |
Bioinformatics |
Zcluster |
|
MyScanACE |
04232012 |
Bioinformatics |
Zcluster |
|
MuTect |
1.1.5 |
Bioinformatics |
Zcluster |
|
NAMD |
2.9 |
Chemistry |
Zcluster |
|
NCBI Blast |
2.2.26 |
Bioinformatics |
Sapelo |
|
NCBI Blast |
2.2.26 |
Bioinformatics |
Zcluster |
|
NCBI Blast + |
2.2.29 |
Bioinformatics |
Sapelo |
|
NCBI Blast + |
2.2.29 |
Bioinformatics |
Zcluster |
|
ncbi blast parsers |
1.0 |
Bioinformatics |
Zcluster |
|
ncbi_toolkit |
12.0.0 |
Bioinformatics |
Zcluster |
|
NETCDF |
3.6.3, 4.1.3, 4.3.2 |
Library |
Sapelo |
|
NETCDF |
3.6.3, 4.1.3 |
Library |
Zcluster |
|
netCDF4-python |
1.0.5 |
Library |
Zcluster |
|
netlogo |
5.0 |
Other |
Zcluster |
|
Newbler |
2.6 |
Bioinformatics |
Sapelo |
|
Newbler |
2.6 |
Bioinformatics |
Zcluster |
|
Newick-utils |
1.6 |
Bioinformatics |
Zcluster |
|
ngopt |
20140604 |
Bioinformatics |
Zcluster |
|
NGS QC Toolkit |
2.3.3 |
Bioinformatics |
Zcluster |
|
Ngsutils |
0.5.0c |
Bioinformatics |
Zcluster |
|
NH PhyloBayes |
0.2.3 |
Bioinformatics |
Zcluster |
|
nhPhyML |
01/2012 |
Bioinformatics |
Zcluster |
|
NovelSeq |
1.0.2 |
Bioinformatics |
Zcluster |
|
NovoAlign |
2.07.18 |
Bioinformatics |
Zcluster |
|
NPUTE |
v1 |
Bioinformatics |
Zcluster |
|
nseg |
04182013 |
Bioinformatics |
Zcluster |
|
numexp |
1.4.2 |
Other |
Zcluster |
|
NWCHEM |
6.5 |
Chemistry |
Sapelo |
|
NWCHEM |
6.3.2 |
Chemistry |
Zcluster |
|
NxTrim |
v0.3.2-alpha |
Bioinformatics |
Sapelo |
|
NxTrim |
0.3.1-alpha |
Bioinformatics |
Zcluster |
|
Oases |
0.2.02, 0.2.8 |
Bioinformatics |
Zcluster |
|
opal |
2.0.0 |
Bioinformatics |
Zcluster |
|
Open Babel |
2.3.1 |
Chemistry |
Zcluster |
|
OpenBUGS |
3.2.2 |
Statistics |
Zcluster |
|
OpenCL |
1.0, 1.1 |
Programming |
Zcluster |
|
OpenCV |
3.0 |
Other |
Sapelo |
|
OpenCV |
2.3.1, 2.4.4 |
Other |
Zcluster |
|
OpenSees |
2015.02.26 |
Other |
Zcluster |
|
opera |
1.3.1 |
Bioinformatics |
Zcluster |
|
Oqtans |
0.1 |
Bioinformatics |
Zcluster |
|
ORCA |
3.0.3 |
Chemistry |
Sapelo |
|
ORCA |
3.0.3 |
Chemistry |
Zcluster |
|
Orthagogue |
1.0.3 |
Bioinformatics |
Zcluster |
|
OrthoFinder |
0.2.5 |
Bioinformatics |
Zcluster |
|
OrthoMCL |
2.0.9 |
Bioinformatics |
Zcluster |
|
OSPREY |
2.0 |
Bioinformatics |
Zcluster |
|
p4 |
r231 |
Bioinformatics |
Zcluster |
|
p7zip |
9.20.1 |
Other |
Zcluster |
|
PacBioToCA |
8.2beta-binary |
Bioinformatics |
Zcluster |
|
pagan |
0.39 |
Bioinformatics |
Zcluster |
|
pagit |
v1 |
Bioinformatics |
Zcluster |
|
Pairfq |
0.14.1 |
Bioinformatics |
Zcluster |
|
PAML |
4.8 |
Bioinformatics |
Zcluster |
|
pandas |
0.16.0 |
Other |
Sapelo |
|
pandaseq |
2.0 |
Bioinformatics |
Zcluster |
|
Papara_nt |
2.1.2 |
Bioinformatics |
Zcluster |
|
ParMETIS |
3.2.0, 4.0.3 |
Math Library |
Zcluster |
|
Paradigm |
0.1-9 |
Bioinformatics |
Zcluster |
|
Paradigmshift |
1.0 |
Bioinformatics |
Zcluster |
|
ParseRNAseq |
1.0 |
Bioinformatics |
Zcluster |
|
PartitionFinder |
2.0.0-pre11 |
Bioinformatics |
Zcluster |
|
PASA |
2.0.2 |
Bioinformatics |
Zcluster |
|
PASHA |
1.0.6 |
Bioinformatics |
Zcluster |
|
PASTA |
1.6.4 |
Bioinformatics |
Zcluster |
|
PatMaN |
1.2.2 |
Bioinformatics |
Zcluster |
|
Paup |
4a146 |
Bioinformatics |
Sapelo |
|
pbh5tools |
0.8.0 |
Bioinformatics |
Zcluster |
|
PBSuite |
15.2.20 |
Bioinformatics |
Zcluster |
|
Peakranger |
1.18 |
Bioinformatics |
Sapelo |
|
PEAR |
0.9.6 |
Bioinformatics |
Zcluster |
|
Perl |
5.14.1 |
Programming |
Zcluster |
|
perM |
0.4.0 |
Bioinformatics |
Zcluster |
|
PETSc |
3.1-p8, 3.4.2 |
Math Library |
Zcluster |
|
Pfam_scan |
04282012 |
Bioinformatics |
Zcluster |
|
pftools |
2.3.5 |
Bioinformatics |
Zcluster |
|
PGDBG |
12.10 |
Debugger |
Zcluster |
|
PGI Compilers |
2014 |
Compiler |
Sapelo |
|
PGI Compilers |
2010, 2011, 2012, 2013, 2014 |
Compiler |
Zcluster |
|
PGPROF |
12.10 |
Profiler |
Zcluster |
|
PHASE |
2.1.1.linux |
Bioinformatics |
Zcluster |
|
phobius |
1.01 |
Bioinformatics |
Zcluster |
|
phred/phrap/conced |
|
Bioinformatics |
Zcluster |
|
Phyldog |
|
Bioinformatics |
Zcluster |
|
PhyloBayes |
3.3b |
Bioinformatics |
Zcluster |
|
PhyloBayes-MPI |
1.3b, 1.4e |
Bioinformatics |
Zcluster |
|
Phylip |
3.69 |
Bioinformatics |
Zcluster |
|
PHYML |
20110919 |
Bioinformatics |
Zcluster |
|
picard |
1.135 |
Bioinformatics |
Sapelo |
|
picard |
1.137 |
Bioinformatics |
Zcluster |
|
picrust |
1.0.0 |
Bioinformatics |
Zcluster |
|
pileup |
0.6 |
Bioinformatics |
Zcluster |
|
pindel |
0.2.4t |
Bioinformatics |
Zcluster |
|
pknotsRG |
1.3 |
Bioinformatics |
Zcluster |
|
platanus |
1.2.1 |
Bioinformatics |
Zcluster |
|
platypus |
0.8.1 |
Bioinformatics |
Sapelo |
|
plink |
1.07, 1.9-beta3 |
Bioinformatics |
Zcluster |
|
popbam |
0.3 |
Bioinformatics |
Zcluster |
|
prank |
100802 |
Bioinformatics |
Zcluster |
|
Primer3 |
2.3.4 |
Bioinformatics |
Zcluster |
|
PRINSEQ |
0.20.3 |
Bioinformatics |
Zcluster |
|
proovread |
2.12 |
Bioinformatics |
Zcluster |
|
Prokka |
1.11 |
Bioinformatics |
Zcluster |
|
protobuf |
2.4.1, 2.6.1, 3.0.0-beta1 |
Other |
Sapelo |
|
protobuf |
2.6.1 |
Other |
Zcluster |
|
Prottest3 |
3.2.1 |
Bioinformatics |
Zcluster |
|
psmc |
0.6.4-r33 |
Bioinformatics |
Zcluster |
|
ptRNApred |
1.0 |
Bioinformatics |
Zcluster |
|
PuMA |
0.904 |
Bioinformatics |
Zcluster |
|
pyfasta |
0.5.2 |
Other, Programming |
Zcluster |
|
pydev |
3.3.3 |
Other, Programming |
Zcluster |
|
pynast |
1.2 |
Bioinformatics |
Zcluster |
|
PyNIO |
1.4.1 |
Other |
Zcluster |
|
pyRAD |
3.0.61 |
Bioinformatics |
Zcluster |
|
pysam |
0.8.1 |
Bioinformatics |
Zcluster |
|
PyTables |
2.3.1 |
Bioinformatics |
Zcluster |
|
Python |
2.6.6, 2.7.8, 3.4.3 |
Programming |
Sapelo |
|
Python |
2.4.3, 2.7.2, 2.7.8, 3.3.0. 3.4.0 |
Programming |
Zcluster |
|
Qiime |
1.7.0 |
Bioinformatics |
Zcluster |
|
qeseq |
0.2.2 |
Bioinformatics |
Zcluster |
|
QT |
4.8.5 |
Other |
Zcluster |
|
QTL Cartographer |
1.17j |
Bioinformatics |
Zcluster |
|
quake |
0.3.4 |
Bioinformatics |
Zcluster |
|
quast |
3.1 |
Bioinformatics |
Zcluster |
|
Quantum Espresso |
4.3.2, 5.0.2 |
Chemistry |
Zcluster |
|
R |
3.1.2, 3.2.1, 3.2.3 |
Statistics |
Sapelo |
|
R |
2.14.0, 2.15.0, 2.15.2, 3.0.0, 3.0.2, 3.0.3, 3.1.0, 3.1.1, 3.2.0, 3.2.3 |
Statistics |
Zcluster |
|
RACA |
0.9.1.1 |
Bioinformatics |
Zcluster |
|
RADnome |
0.0.1-7-25 |
Bioinformatics |
Zcluster |
|
RANDFOLD |
2.0 |
Bioinformatics |
Zcluster |
|
RAPSearch2 |
2.23 |
Bioinformatics |
Sapelo |
|
RAPSearch2 |
2.17 |
Bioinformatics |
Zcluster |
|
RATT |
1.0 |
Bioinformatics |
Zcluster |
|
RAxML |
8.2.4 |
Bioinformatics |
Sapelo |
|
RAxML |
8.2.4 |
Bioinformatics |
Zcluster |
|
RAxML-Light |
1.0.5 |
Bioinformatics |
Zcluster |
|
RCCBatchBlast |
5.0 |
Bioinformatics |
Zcluster |
|
RCCBatchBlastPlus |
1.0 |
Bioinformatics |
Zcluster |
|
READemption |
0.3.7 |
Bioinformatics |
Sapelo |
|
REAPR |
1.0.16 |
Bioinformatics |
Zcluster |
|
RECON |
1.08 |
Bioinformatics |
Zcluster |
|
RepeatExplorer |
02/2015 |
Bioinformatics |
Zcluster |
|
Repeatmasker |
4.0.5 |
Bioinformatics |
Sapelo |
|
Repeatmasker |
4.0.5 |
Bioinformatics |
Zcluster |
|
Repeatmodeler |
1.0.8 |
Bioinformatics |
Sapelo |
|
Repeatmodeler |
1.0.8 |
Bioinformatics |
Zcluster |
|
Reptile |
1.1 |
Bioinformatics |
Zcluster |
|
RepeatScout |
1.05 |
Bioinformatics |
Zcluster |
|
riboPicker |
0.4.3 |
Bioinformatics |
Zcluster |
|
RIP |
4 |
Other |
Zcluster |
|
RITA |
1.0.1 |
Bioinformatics |
Zcluster |
|
RMBlast |
2.2.27 |
Bioinformatics |
Zcluster |
|
Rmpi |
0.5-9, 0.6-1, 0.6-3, 0.6-5 |
Programming |
Zcluster |
|
RNA-SeQC |
1.1.8 |
Bioinformatics |
Zcluster |
|
RNAmmer |
1.2 |
Bioinformatics |
Sapelo |
|
RNAmmer |
1.2 |
Bioinformatics |
Zcluster |
|
RNAprof |
1.2.0 |
Bioinformatics |
Zcluster |
|
rnaQUAST |
0.3.0 |
Bioinformatics |
Zcluster |
|
RNAshapes |
2.1.6 |
Bioinformatics |
Zcluster |
|
RNAz |
2.1 |
Bioinformatics |
Zcluster |
|
rnnotator |
2.4.12 |
Bioinformatics |
Zcluster |
|
Rockhopper |
2.0.2 |
Bioinformatics |
Zcluster |
|
rpy |
1.0.3 |
Other |
Zcluster |
|
rpy2 |
2.4.3 |
Other |
Zcluster |
|
Roche |
2.6 |
Bioinformatics |
Zcluster |
|
RogueNaRok |
1.0 |
Bioinformatics |
Zcluster |
|
ROOT |
5.34.09 |
Library |
Zcluster |
|
RSAT (RSA-tools) |
1.0 |
Bioinformatics |
Zcluster |
|
RSEM |
1.2.20 |
Bioinformatics |
Sapelo |
|
RSEM |
1.2.20 |
Bioinformatics |
Zcluster |
|
RSEG |
0.4.8NC |
Bioinformatics |
Zcluster |
|
RSeQC |
2.6.3 |
Bioinformatics |
Zcluster |
|
rspr |
1.2.2 |
Other |
Zcluster |
|
RUM |
1.11 |
Bioinformatics |
Zcluster |
|
Sage |
6.3 |
Other |
Zcluster |
|
sailfish |
0.6.3 |
Bioinformatics |
Zcluster |
|
sambamba |
0.4.7 |
Bioinformatics |
Zcluster |
|
samblaster |
0.1.15 |
Bioinformatics |
Zcluster |
|
samtools |
1.2.0 |
Bioinformatics |
Sapelo |
|
samtools |
1.2 |
Bioinformatics |
Zcluster |
|
SATé |
2.2.7 |
Bioinformatics |
Zcluster |
|
sbt |
0.13.9 |
Other, Programming |
Zcluster |
|
scala |
2.11.7 |
Other, Programming |
Zcluster |
|
ScaLAPACK |
2.0.2 |
Math Library |
Zcluster |
|
Scripture |
3/20/2015 |
Bioinformatics |
Sapelo |
|
Scripture |
3/20/2015 |
Bioinformatics |
Zcluster |
|
SEAStAR |
0.4.8 |
Bioinformatics |
Zcluster |
|
segemehl |
0.1.9 |
Bioinformatics |
Zcluster |
|
seqMINER |
1.3.3e |
Bioinformatics |
Zcluster |
|
seqtk |
1.0-r63-dirty |
Bioinformatics |
Sapelo |
|
seqtk |
1.0-r63-dirty |
Bioinformatics |
Zcluster |
|
SEQuel |
1.0.2 |
Bioinformatics |
Zcluster |
|
sga |
0.10.14 |
Bioinformatics |
Sapelo |
|
SHE-RA |
012012 |
Bioinformatics |
Zcluster |
|
SHORE |
0.9.3 |
Bioinformatics |
Zcluster |
|
SHOREmap |
2.0, 3.0 |
Bioinformatics |
Zcluster |
|
sicer |
1.1 |
Bioinformatics |
Zcluster |
|
sickle |
1.200 |
Bioinformatics |
Zcluster |
|
SigHunt |
1.0 |
Bioinformatics |
Zcluster |
|
SignalIP |
4.1c |
Bioinformatics |
Zcluster |
|
SISRS |
1.0 |
Bioinformatics |
Zcluster |
|
SiZer |
07022012 |
Bioinformatics |
Zcluster |
|
slclust |
04282012 |
Bioinformatics |
Zcluster |
|
SMRT-Analysis |
2.3.0 |
Bioinformatics |
Zcluster |
|
SNAP |
2010-7-28 |
Bioinformatics |
Zcluster |
|
SNAPP |
1.1.4 |
Bioinformatics |
Zcluster |
|
SnoReport |
1.3 |
Bioinformatics |
Zcluster |
|
snow |
0.3-8, 0.3-10, 0.3-12, 0.3-13 |
Statistics |
Zcluster |
|
snowhite |
1.1.4 |
Bioinformatics |
Zcluster |
|
snpEff |
4.11 |
Bioinformatics |
Zcluster |
|
SNPhylo |
20140701 |
Bioinformatics |
Zcluster |
|
Soap2 |
2.21 |
Bioinformatics |
Zcluster |
|
SOAPaligner |
2.21 |
Bioinformatics |
Zcluster |
|
SOAPdenovo |
1.05 |
Bioinformatics |
Zcluster |
|
SOAPdenovo-trans |
1.01 |
Bioinformatics |
Zcluster |
|
SOAPdenovo2 |
r240 |
Bioinformatics |
Sapelo |
|
SOAPdenovo2 |
r223, r240 |
Bioinformatics |
Zcluster |
|
SOAPsnp |
1.03 |
Bioinformatics |
Zcluster |
|
SomaticCall |
42811 |
Bioinformatics |
Zcluster |
|
spimap |
1.1 |
Bioinformatics |
Zcluster |
|
SPAdes |
3.6.2 |
Bioinformatics |
Sapelo |
|
SPAdes |
3.6.2 |
Bioinformatics |
Zcluster |
|
SparseAssembler |
2012/06/15 |
Bioinformatics |
Zcluster |
|
sprai |
0.9.9.10 |
Bioinformatics |
Zcluster |
|
Splitaake |
1.0 |
Bioinformatics |
Zcluster |
|
spolpred |
09/10/2013 |
Bioinformatics |
Zcluster |
|
sprspace |
1.0 |
Other |
Zcluster |
|
Sputnik |
03/20/2013 |
Bioinformatics |
Zcluster |
|
SRA |
2.3.4-2 |
Bioinformatics |
Zcluster |
|
SSAHA2 |
2.5.5 |
Bioinformatics |
Zcluster |
|
SSAKE |
v3-8 |
Bioinformatics |
Zcluster |
|
SSPACE |
2.0 |
Bioinformatics |
Zcluster |
|
ssr_pipeline |
0.95 |
Bioinformatics |
Zcluster |
|
stacks |
1.35 |
Bioinformatics |
Sapelo |
|
stacks |
1.35 |
Bioinformatics |
Zcluster |
|
STAMPY |
1.0.21 |
Bioinformatics |
Zcluster |
|
STAR |
2.4.2a |
Bioinformatics |
Sapelo |
|
STAR |
2.4.1c |
Bioinformatics |
Zcluster |
|
STEM |
2.0 |
Bioinformatics |
Zcluster |
|
strauto |
0.3.1 |
Bioinformatics |
Zcluster |
|
StringTie |
1.2.0 |
Bioinformatics |
Sapelo |
|
StringTie |
1.1.2 |
Bioinformatics |
Zcluster |
|
structure |
2.3.4 |
Bioinformatics |
Sapelo |
|
structure |
2.3.4 |
Bioinformatics |
Zcluster |
|
structurama |
2.0 |
Bioinformatics |
Zcluster |
|
subread |
1.4.6 |
Bioinformatics |
Zcluster |
|
suma_package |
1.0 |
Bioinformatics |
Zcluster |
|
SUNTANS |
20150923 |
Other |
Sapelo |
|
SUNTANS |
697-trunk, 784 |
Other |
Zcluster |
|
SuperLU |
4.3 |
Math Library |
Zcluster |
|
SuperLU_dist |
3.3 |
Math Library |
Zcluster |
|
SUPPA |
06122015 |
Bioinformatics |
Sapelo |
|
SVDetect |
r0.7m |
Bioinformatics |
Zcluster |
|
SVDquartets |
1.0 |
Bioinformatics |
Zcluster |
|
SWIG |
3.0.2 |
Programming |
Zcluster |
|
T-Coffee |
9.03.r1318 |
Bioinformatics |
Zcluster |
|
tabix |
0.2.5 |
Bioinformatics |
Zcluster |
|
TagCleaner |
0.13 |
Bioinformatics |
Zcluster |
|
Tandem Repeats Finder |
4.07b |
Bioinformatics |
Zcluster |
|
TAPDANCE |
03/20/2013 |
Bioinformatics |
Zcluster |
|
tassel |
4.0 |
Bioinformatics |
Zcluster |
|
tax2tree |
1.0 |
Bioinformatics |
Zcluster |
|
TEClass |
2.1 |
Bioinformatics |
Zcluster |
|
TEMP |
1.0.4 |
Bioinformatics |
Zcluster |
|
tgicl |
2.1 |
Bioinformatics |
Zcluster |
|
Theano |
0.6.0 |
Other |
Zcluster |
|
TIGER |
1.02 |
Bioinformatics |
Zcluster |
|
tmhmm |
2.0c |
Bioinformatics |
Zcluster |
|
tophat |
2.0.14 |
Bioinformatics |
Sapelo |
|
tophat |
2.0.14 |
Bioinformatics |
Zcluster |
|
trans-abyss |
1.4.4 |
Bioinformatics |
Zcluster |
|
TransDecoder |
2.0.1 |
Bioinformatics |
Sapelo |
|
TransDecoder |
2.0.1 |
Bioinformatics |
Zcluster |
|
Transrate |
1.0.1 |
Bioinformatics |
Sapelo |
|
Tracer |
v 1.5 |
Bioinformatics |
Zcluster |
|
TRE |
4.07b |
Bioinformatics |
Zcluster |
|
TreeFix-DTL |
1.0.2 |
Bioinformatics |
Zcluster |
|
treemix |
1.12 |
Bioinformatics |
Zcluster |
|
Triangle |
1.6 |
Math Library |
Zcluster |
|
trimal |
1.4 |
Bioinformatics |
Zcluster |
|
trimmomatic |
0.33 |
Bioinformatics |
Sapelo |
|
trimmomatic |
0.32 |
Bioinformatics |
Zcluster |
|
TrimGalore |
4.0 |
Bioinformatics |
Sapelo |
|
TrimGalore |
0.3.7 |
Bioinformatics |
Zcluster |
|
trimreads |
07232013 |
Bioinformatics |
Zcluster |
|
Trinity |
2.06 |
Bioinformatics |
Sapelo |
|
Trinity |
2.06 |
Bioinformatics |
Zcluster |
|
Trinotate |
r20131110 |
Bioinformatics |
Zcluster |
|
tRNAscan-SE |
1.23 |
Bioinformatics |
Zcluster |
|
UClust |
1.2.22q |
Bioinformatics |
Zcluster |
|
UNAFold |
3.8 |
Bioinformatics |
Zcluster |
|
UPP |
2.0 |
Other |
Zcluster |
|
usearch |
8.0.1623 |
Bioinformatics |
Sapelo |
|
usearch |
7.0.1090_i86 |
Bioinformatics |
Zcluster |
|
UCSC |
07-11-2014 |
Bioinformatics |
Zcluster |
|
varscan |
2.3.8 |
Bioinformatics |
Zcluster |
|
vcftools |
0.1.12b |
Bioinformatics |
Sapelo |
|
vcftools |
0.1.12a |
Bioinformatics |
Zcluster |
|
velvet |
1.2.10 |
Bioinformatics |
Sapelo |
|
velvet |
1.2.08, 1.2.10 |
Bioinformatics |
Zcluster |
|
VelvetOptimiser |
2.2.5 |
Bioinformatics |
Zcluster |
|
VEP |
76 |
Bioinformatics |
Zcluster |
|
VICUNA |
1.3 |
Bioinformatics |
Zcluster |
|
ViennaRNA |
1.8.5, 2.1.7 |
Bioinformatics |
Zcluster |
|
virtualenv |
1.8.1 |
Other |
Zcluster |
|
vmatch |
2.1.6 |
Bioinformatics |
Zcluster |
|
VMD |
1.9.1 |
Chemistry |
Zcluster |
|
vsearch |
1.1.0 |
Bioinformatics |
Zcluster |
|
VTK |
5.8.0 |
Other |
Zcluster |
|
webLogo |
3.3 |
Bioinformatics |
Zcluster |
|
weka |
3.6.10 |
Other |
Zcluster |
|
wgs |
8.2 |
Bioinformatics |
Sapelo |
|
wgs |
8.2beta-binary |
Bioinformatics |
Zcluster |
|
wigToBigWig |
v4 |
Bioinformatics |
Zcluster |
|
WISE2 |
2.4.1 |
Bioinformatics |
Zcluster |
|
WPS |
3.7 |
Other |
Sapelo |
|
WPS |
3.4.1 |
Other |
Zcluster |
|
WRF |
3.7 |
Other |
Sapelo |
|
WRF |
3.4.1 |
Other |
Zcluster |
|
WU Blast |
2.2.6 |
Bioinformatics |
Sapelo |
|
WU Blast |
2.2.6 |
Bioinformatics |
Zcluster |
|
XP-CLR |
1.0 |
Bioinformatics |
Zcluster |
|
Xscape |
11182014 |
Bioinformatics |
Zcluster |
|
yasra |
2.3 |
Bioinformatics |
Zcluster |
|
zlib |
1.2.5, 1.2.8 |
Library |
Sapelo |
|
Zorro |
2.2 |
Bioinformatics |
Zcluster |
|
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