BWA

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hg19 is indexed at /db/hg/hg19

/usr/local/bwa/latest/bwa index -p h19 -a bwtsw /db/hg/hg19/hg19.fa
/usr/local/bwa/latest/bwa index /db/hg19/chromFa.tar.gz

Retrieved from "https://wiki.gacrc.uga.edu/index.php?title=BWA&oldid=4070"