Software-old: Difference between revisions

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<!--LIST BEGIN-->
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| [[4p-Sapelo | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="0">[[4p-Sapelo | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[4p-Sapelo2 | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[4p-Sapelo2 | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[ABySS-Sapelo|ABySS]] ||2.0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="A">[[ABySS-Sapelo|ABySS]] ||2.0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[ABySS-Sapelo2|ABySS]] ||1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[ABySS-Sapelo2|ABySS]] ||1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[Artemis-Sapelo2|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Artemis-Sapelo2|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| <span id="A">[[Artemis-Teaching|Artemis]]  || 17.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Artemis-Teaching|Artemis]]  || 17.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[AStalavista-Sapelo|AStalavista]] || 3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[AStalavista-Sapelo|AStalavista]] || 3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[AUGUSTUS-Sapelo2|AUGUSTUS]]  || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[AUGUSTUS-Sapelo2|AUGUSTUS]]  || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| <span id="A">[[AUGUSTUS-Teaching|AUGUSTUS]]  || 3.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[AUGUSTUS-Teaching|AUGUSTUS]]  || 3.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B"></span>[[BAGEL-Sapelo|BAGEL]] || 2016.12.14, 2017.02.13 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="B"></span>[[BAGEL-Sapelo|BAGEL]] || 2016.12.14, 2017.02.13 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[BCFtools-Sapelo2|BCFtools]] || 1.3.1, 1.6, 1.8  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[BCFtools-Sapelo2|BCFtools]] || 1.3.1, 1.6, 1.8  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[BCFtools-Teaching|BCFtools]]  || 1.8, 1.6, 1.3.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[BCFtools-Teaching|BCFtools]]  || 1.8, 1.6, 1.3.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[bcl2fastq-Sapelo|bcl2fastq]] || 2.17.1.14  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[bcl2fastq-Sapelo|bcl2fastq]] || 2.17.1.14  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[BEDTools-Sapelo2|BEDTools]] || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[BEDTools-Sapelo2|BEDTools]] || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[BEDTools-Teaching|BEDTools]]  || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[BEDTools-Teaching|BEDTools]]  || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[BioPerl-Teaching|BioPerl]]  || 1.7.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[BioPerl-Teaching|BioPerl]]  || 1.7.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Biopython-Teaching|Biopython]]  || 1.68|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[Biopython-Teaching|Biopython]]  || 1.68|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[BLAST-Sapelo2|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[BLAST-Sapelo2|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[Bison-Sapelo2|Bison]] || 2.7, 3.0.2, 3.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Bison-Sapelo2|Bison]] || 2.7, 3.0.2, 3.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[BLAST-Teaching|BLAST]]  || 2.2.26|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[BLAST-Teaching|BLAST]]  || 2.2.26|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[BLAST+-Teaching|BLAST+]]  || 2.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[BLAST+-Teaching|BLAST+]]  || 2.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Blat-Sapelo|Blat]] || 36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Blat-Sapelo|Blat]] || 36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[bowtie2-Sapelo2|bowtie2]] || 2.2.3, 2.3.3, 2.3.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[bowtie2-Sapelo2|bowtie2]] || 2.2.3, 2.3.3, 2.3.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| <span id="B">[[Bowtie2-Teaching|Bowtie2]]  || 2.3.4.1, 2.3.3, 2.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Bowtie2-Teaching|Bowtie2]]  || 2.3.4.1, 2.3.3, 2.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[BP&P-Sapelo|BP&P]] || 4.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[BP&P-Sapelo|BP&P]] || 4.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[breakdancer-Sapelo|breakdancer]] || 1.1.2_2013_03_08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[breakdancer-Sapelo|breakdancer]] || 1.1.2_2013_03_08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[BreakDancer-Sapelo2|BreakDancer]] || 1.4.5-foss-2016b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[BreakDancer-Sapelo2|BreakDancer]] || 1.4.5-foss-2016b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[BWA-Sapelo2| BWA ]] || 0.7.15, 0.7.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[BWA-Sapelo2| BWA ]] || 0.7.15, 0.7.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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|-
| <span id="B">[[BWA-Teaching|BWA]]  || 0.7.17, 0.7.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[BWA-Teaching|BWA]]  || 0.7.17, 0.7.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="C"></span> [[Caffe-Sapelo|Caffe]] || 12.04.2015|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="C"></span> [[Caffe-Sapelo|Caffe]] || 12.04.2015|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[canu-Sapelo2|canu]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[canu-Sapelo2|canu]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="C">[[canu-Teaching|Canu]]  || 1.7, 1.6, 1.5, 1.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[canu-Teaching|Canu]]  || 1.7, 1.6, 1.5, 1.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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|-
| [[CAP-miRSeq-Sapelo2|CAP-miRSeq]] || 05/20184 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[CAP-miRSeq-Sapelo2|CAP-miRSeq]] || 05/20184 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[Clustal-Omega-Sapelo2|Clustal-Omega]] || 1.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Clustal-Omega-Sapelo2|Clustal-Omega]] || 1.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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|-
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| [[ClustalW-Sapelo|ClustalW]]  || 1.83 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[ClustalW-Sapelo|ClustalW]]  || 1.83 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[Cufflinks-Sapelo2|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Cufflinks-Sapelo2|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="C">[[Cufflinks-Teaching|Cufflinks]]  || 2.2.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Cufflinks-Teaching|Cufflinks]]  || 2.2.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[cURL-Sapelo2|cURL]] || 7.49.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[cURL-Sapelo2|cURL]] || 7.49.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[EMBOSS-Sapelo2|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[EMBOSS-Sapelo2|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="E">[[EMBOSS-Teaching|EMBOSS]]  || 6.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[EMBOSS-Teaching|EMBOSS]]  || 6.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[emirge-Sapelo|emirge]] ||0.61.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[emirge-Sapelo|emirge]] ||0.61.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[FriBidi-Sapelo2|FriBidi]] || 1.0.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[FriBidi-Sapelo2|FriBidi]] || 1.0.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="G">[[GAG-Teaching|GAG]]  || 2.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| <span id="G"></span>[[GAG-Teaching|GAG]]  || 2.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="G"></span>[[gam-ngs-Sapelo|gam-ngs]] || 1.1b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[gam-ngs-Sapelo|gam-ngs]] || 1.1b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[GAMESS-Sapelo|GAMESS]] || 5Dec2014 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[GAMESS-Sapelo|GAMESS]] || 5Dec2014 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[GapFiller-Sapelo|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[GapFiller-Sapelo|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="G">[[GapFiller-Teaching|GapFiller]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[GapFiller-Teaching|GapFiller]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[GAPIT-Sapelo2|GAPIT]] || 20180524 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[GAPIT-Sapelo2|GAPIT]] || 20180524 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[GATK-Sapelo2|GATK]] || 3.4-0, 3.8-0, 4.0.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[GATK-Sapelo2|GATK]] || 3.4-0, 3.8-0, 4.0.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
|-
| [[GATK-Teaching|GATK]]  || 3.8-0, 3.4-0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| <span id="G">[[GATK-Teaching|GATK]]  || 3.8-0, 3.4-0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[GAUSSIAN-Sapelo|GAUSSIAN]] || 09 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[GAUSSIAN-Sapelo|GAUSSIAN]] || 09 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[GeneMarkES-Sapelo2|GeneMarkES]]  || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[GeneMarkES-Sapelo2|GeneMarkES]]  || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="G">[[GeneMarkES-Teaching|GeneMarkES]]  || 4.33|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[GeneMarkES-Teaching|GeneMarkES]]  || 4.33|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[GeneMarkS-Sapelo2|GeneMarkS]]  ||4.30|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[GeneMarkS-Sapelo2|GeneMarkS]]  ||4.30|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
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| [[Java-Sapelo2|Java]] || 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Java-Sapelo2|Java]] || 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="J">[[Java-Teaching|Java]]  || 1.8.0_144, 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Java-Teaching|Java]]  || 1.8.0_144, 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Jellyfish-Sapelo|Jellyfish]] || 2.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Jellyfish-Sapelo|Jellyfish]] || 2.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 966: Line 961:
| [[MUMmer-Sapelo2|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[MUMmer-Sapelo2|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="M">[[MUMmer-Teaching|MUMmer]]  || 3.23|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[MUMmer-Teaching|MUMmer]]  || 3.23|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[MUSCLE-Sapelo|MUSCLE]] || 3.8.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[MUSCLE-Sapelo|MUSCLE]] || 3.8.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,046: Line 1,041:
| [[OrthoFinder-Sapelo2|OrthoFinder]]  || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[OrthoFinder-Sapelo2|OrthoFinder]]  || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="O">[[OrthoFinder-Teaching|OrthoFinder]]  || 2.1.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[OrthoFinder-Teaching|OrthoFinder]]  || 2.1.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P"></span> [[PAGIT-Sapelo2|PAGIT]]  || 1.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| <span id="P"></span> [[PAGIT-Sapelo2|PAGIT]]  || 1.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
Line 1,056: Line 1,051:
| [[PAML-Sapelo2|PAML]]  || 4.9h || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[PAML-Sapelo2|PAML]]  || 4.9h || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P">[[PAML-Teaching|PAML]]  || 4.9h|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[PAML-Teaching|PAML]]  || 4.9h|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[pandas-Sapelo | pandas]] || 0.16.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[pandas-Sapelo | pandas]] || 0.16.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,144: Line 1,139:
| [[picard-Sapelo2 |picard]] || 2.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[picard-Sapelo2 |picard]] || 2.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P">[[picard-Teaching|Picard]]  || 2.16.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[picard-Teaching|Picard]]  || 2.16.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[picrust-Sapelo|picrust]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[picrust-Sapelo|picrust]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,160: Line 1,155:
| [[Pilon-Sapelo2|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Pilon-Sapelo2|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P">[[pilon-Teaching|Pilon]]  || 1.22|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[pilon-Teaching|Pilon]]  || 1.22|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Pindel-Sapelo|Pindel]]  ||0.2.5b8|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Pindel-Sapelo|Pindel]]  ||0.2.5b8|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,206: Line 1,201:
| [[Prokka-Sapelo2|Prokka]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Prokka-Sapelo2|Prokka]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P">[[proovread-Teaching|Proovread]]  || 2.14.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[proovread-Teaching|Proovread]]  || 2.14.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[protobuf-Sapelo|protobuf]] || 2.4.1, 2.6.1, 3.0.0-beta1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[protobuf-Sapelo|protobuf]] || 2.4.1, 2.6.1, 3.0.0-beta1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,231: Line 1,226:
|-
|-
| [[Pysam-Sapelo2 | Pysam]] || 0.10.0, 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Pysam-Sapelo2 | Pysam]] || 0.10.0, 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
|-
| [[Python-Sapelo | Python]] || 2.6.6, 2.7.8, 2.7.13, 3.5.2, 3.6.4 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Python-Sapelo | Python]] || 2.6.6, 2.7.8, 2.7.13, 3.5.2, 3.6.4 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,237: Line 1,231:
| [[Python-Sapelo2 | Python]] || 2.7.12, 2.7.14, 3.4.3, 3.5.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Python-Sapelo2 | Python]] || 2.7.12, 2.7.14, 3.4.3, 3.5.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="P">[[Python-Teaching|Python]]  || 3.6.4, 3.5.2, 2.7.14, 2.7.12|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Python-Teaching|Python]]  || 3.6.4, 3.5.2, 2.7.14, 2.7.12|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[PyTorch-Sapelo|PyTorch]] || 0.1.9, 0.1.11 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[PyTorch-Sapelo|PyTorch]] || 0.1.9, 0.1.11 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,283: Line 1,277:
| [[RAxML-Sapelo2 | RAxML]] || 8.2.4, 8.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[RAxML-Sapelo2 | RAxML]] || 8.2.4, 8.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="R">[[RAxML-Teaching|RAxML]]  || 8.2.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[RAxML-Teaching|RAxML]]  || 8.2.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Ray-Sapelo | Ray]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Ray-Sapelo | Ray]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,319: Line 1,313:
| [[Repeatmodeler-Sapelo2|Repeatmodeler]] || 1.0.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Repeatmodeler-Sapelo2|Repeatmodeler]] || 1.0.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="R">[[RepeatModeler-Teaching|RepeatModeler]]  || 1.0.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[RepeatModeler-Teaching|RepeatModeler]]  || 1.0.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[RepeatScout-Sapelo2|RepeatScout]]  ||1.0.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[RepeatScout-Sapelo2|RepeatScout]]  ||1.0.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="R">[[RepeatScout-Teaching|RepeatScout]]  || 1.05|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[RepeatScout-Teaching|RepeatScout]]  || 1.05|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[REPET-Sapelo2|REPET]]  || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[REPET-Sapelo2|REPET]]  || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
Line 1,379: Line 1,373:
| [[SAMtools-Sapelo2|SAMtools]] || 0.1.19, 1.3.1, 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SAMtools-Sapelo2|SAMtools]] || 0.1.19, 1.3.1, 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[SAMtools-Teaching|SAMtools]]  || 1.6, 1.3.1, 0.1.19|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[SAMtools-Teaching|SAMtools]]  || 1.6, 1.3.1, 0.1.19|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[SATé-Sapelo|SATé]] || 2.2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[SATé-Sapelo|SATé]] || 2.2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,431: Line 1,425:
| [[SMRTLINK-Sapelo2|SMRTLINK]]  ||5.1.0.26412|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SMRTLINK-Sapelo2|SMRTLINK]]  ||5.1.0.26412|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[SMRTLINK-Teaching|SMRTLINK]]  || 5.1.0.26412, 5.0.1.9585|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[SMRTLINK-Teaching|SMRTLINK]]  || 5.1.0.26412, 5.0.1.9585|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[snakemake-Sapelo|snakemake]] || 4.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[snakemake-Sapelo|snakemake]] || 4.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,437: Line 1,431:
| [[SNAP-Zoe-Sapelo2|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SNAP-Zoe-Sapelo2|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[SNAP-Zoe-Teaching|SNAP-Zoe]]  || 20060728|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[SNAP-Zoe-Teaching|SNAP-Zoe]]  || 20060728|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Sniffles-Sapelo2|Sniffles]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Sniffles-Sapelo2|Sniffles]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
Line 1,459: Line 1,453:
| [[SOAPdenovo2-Sapelo2|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SOAPdenovo2-Sapelo2|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[SOAPdenovo2-Teaching|SOAPdenovo2]]  || r240|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[SOAPdenovo2-Teaching|SOAPdenovo2]]  || r240|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[SOP-GPU-Sapelo2|SOP-GPU]] || 20180404 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SOP-GPU-Sapelo2|SOP-GPU]] || 20180404 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
Line 1,467: Line 1,461:
| [[SortMeRNA-Sapelo2|SortMeRNA]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[SortMeRNA-Sapelo2|SortMeRNA]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[SPAdes-Teaching|SPAdes]]  || 3.11.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[SPAdes-Teaching|SPAdes]]  || 3.11.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Spark-Sapelo|Spark]] || 1.6.0, 2.0.1, 2.2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Spark-Sapelo|Spark]] || 1.6.0, 2.0.1, 2.2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,491: Line 1,485:
| [[Stacks-Sapelo2|Stacks]] || 1.48 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Stacks-Sapelo2|Stacks]] || 1.48 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[Stacks-Teaching|Stacks]]  || 2.0, 1.48|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Stacks-Teaching|Stacks]]  || 2.0, 1.48|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[STAMP-Sapelo | STAMP]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[STAMP-Sapelo | STAMP]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,501: Line 1,495:
| [[STAR-Sapelo2|STAR]] || 2.5.3a, 2.6.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[STAR-Sapelo2|STAR]] || 2.5.3a, 2.6.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="S">[[STAR-Teaching|STAR]]  || 2.6.0c, 2.5.3a|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[STAR-Teaching|STAR]]  || 2.6.0c, 2.5.3a|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[StringTie-Sapelo|StringTie]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[StringTie-Sapelo|StringTie]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,565: Line 1,559:
| [[Tophat-Sapelo2|Tophat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Tophat-Sapelo2|Tophat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="T">[[TopHat-Teaching|TopHat]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[TopHat-Teaching|TopHat]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[TPP-Sapelo2|TPP]] || 5.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[TPP-Sapelo2|TPP]] || 5.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
Line 1,595: Line 1,589:
| [[Trinity-Sapelo2|Trinity]] || r20140717, 2.5.1, 2.6.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Trinity-Sapelo2|Trinity]] || r20140717, 2.5.1, 2.6.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="T">[[Trinity-Teaching|Trinity]]  || 2.6.6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[Trinity-Teaching|Trinity]]  || 2.6.6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Trinotate-Sapelo|Trinotate]]  || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[Trinotate-Sapelo|Trinotate]]  || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,631: Line 1,625:
| [[vcf2phylip-Sapelo2|vcf2phylip]]  || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[vcf2phylip-Sapelo2|vcf2phylip]]  || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="V">[[VCFtools-Teaching|VCFtools]]  || 0.1.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| [[VCFtools-Teaching|VCFtools]]  || 0.1.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[velvet-Sapelo|velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[velvet-Sapelo|velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,637: Line 1,631:
| [[Velvet-Sapelo2|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[Velvet-Sapelo2|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
|-
| [[Velvet-Teaching|Velvet]]  || 1.2.10|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
| <span id="V">[[Velvet-Teaching|Velvet]]  || 1.2.10|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[ViennaRNA-Sapelo|ViennaRNA]]  ||2.1.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[ViennaRNA-Sapelo|ViennaRNA]]  ||2.1.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
Line 1,693: Line 1,686:
|-
|-
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
|-
|}
|}

Revision as of 09:05, 13 August 2018

Below is a partial list of software packages installed on Sapelo, Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching: 

module spider

You can also use the command above to search for a specific application. For more information, please see Lmod.

Installed Software List

Last updated 2018-08-13. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name Version Category Cluster
4p 1.0 Bioinformatics Sapelo Up20.png
4p 1.0 Bioinformatics Sapelo2 Up20.png
ABySS 2.0.2 Bioinformatics Sapelo Up20.png
ABySS 1.9.0, 2.0.2, 2.1.0 Bioinformatics Sapelo2 Up20.png
aeneas 1.7.3 Other Sapelo Up20.png
AFNI 17.3.05 Other Sapelo2 Up20.png
AGE 0.4 Bioinformatics Sapelo Up20.png
AlignGraph 20180709 Bioinformatics Sapelo2 Up20.png
Allmaps 0.6.6 Bioinformatics Sapelo Up20.png
AlleleSeq_pipeline 1.2a Chemistry Sapelo2 Up20.png
AMBER 14 Chemistry Sapelo Up20.png
AMBER 14 Chemistry Sapelo2 Up20.png
amos 3.1.0 Bioinformatics Sapelo Up20.png
AMOS 3.1.0 Bioinformatics Sapelo2 Up20.png
Anaconda 2.2.0, 2.5.0, 3-2.2.0, 2-4.1.1 Programming Sapelo Up20.png
Anaconda2 4.2.0, 4.3.0, 4.4.0 Programming Sapelo Up20.png
Anaconda2 5.0.1 Programming Sapelo2 Up20.png
Anaconda3 4.2.0, 4.3.0, 5.0.0 Programming Sapelo Up20.png
Anaconda3 5.0.1 Programming Sapelo2 Up20.png
ANI 2.0 Bioinformatics Sapelo Up20.png
ANNOgesic 0.6.17 Bioinformatics Sapelo Up20.png
annovar 2017Jul16 Bioinformatics sapelo2 Up20.png
ANSYS 16.2 Engineering Sapelo Up20.png
apache-ant 1.9.6 Other Sapelo Up20.png
Aragorn 1.2.38 Bioinformatics Sapelo2 Up20.png
ARC 1.1.4-beta Bioinformatics Sapelo Up20.png
Arlequin 3.5.2.2 Bioinformatics Sapelo2 Up20.png
ART 20160605 Bioinformatics Sapelo Up20.png
ART 20160605 Bioinformatics Sapelo2 Up20.png
Artemis 17.0.1 Bioinformatics Sapelo2 Up20.png
Artemis 17.0.1 Bioinformatics Teaching Up20.png
AStalavista 3.2 Bioinformatics Sapelo Up20.png
ASTRAL 5.6.1 Bioinformatics Sapelo2 Up20.png
augustus 3.2.3 Bioinformatics Sapelo Up20.png
AUGUSTUS 3.2.3 Bioinformatics Sapelo2 Up20.png
AUGUSTUS 3.2.3 Bioinformatics Teaching Up20.png
BAGEL 2016.12.14, 2017.02.13 Chemistry Sapelo Up20.png
BaitsTools 1.0 Bioinformatics Sapelo Up20.png
bam-readcount 0.8.0 Bioinformatics Sapelo Up20.png
Bamtools 2.4.0 Bioinformatics Sapelo Up20.png
BamTools 2.4.1 Bioinformatics Sapelo2 Up20.png
Barrnap 0.9 Bioinformatics Sapelo2 Up20.png
basespace-cli 0.8.10 Bioinformatics Sapelo Up20.png
BayesAss 3.0.4 Bioinformatics Sapelo2 Up20.png
Bazel 0.4.5 Other Sapelo Up20.png
Bazel 0.8.1, 0.11.1 Other Sapelo2 Up20.png
BBMap 35.82 Bioinformatics Sapelo Up20.png
BBMap 37.67 Bioinformatics Sapelo2 Up20.png
bcftools 1.6 Bioinformatics Sapelo Up20.png
BCFtools 1.3.1, 1.6, 1.8 Bioinformatics Sapelo2 Up20.png
BCFtools 1.8, 1.6, 1.3.1 Bioinformatics Teaching Up20.png
bcl2fastq 2.17.1.14 Bioinformatics Sapelo Up20.png
bcl2fastq 2.20.0 Bioinformatics Sapelo2 Up20.png
BEAST 2.4.1 Bioinformatics Sapelo Up20.png
Beast 2.4.8pre Bioinformatics Sapelo2 Up20.png
BEDops 2.4.14 Bioinformatics Sapelo Up20.png
BEDOPS 2.4.30 Bioinformatics Sapelo2 Up20.png
BEDTools 2.24.0, 2.25.0 2.26.0 Bioinformatics Sapelo Up20.png
BEDTools 2.26.0 Bioinformatics Sapelo2 Up20.png
BEDTools 2.26.0 Bioinformatics Teaching Up20.png
BioPerl 1.7.1 Bioinformatics Teaching Up20.png
Biopython 1.68 Bioinformatics Teaching Up20.png
BLAST 2.2.26 Bioinformatics Sapelo2 Up20.png
BEST 2.3.1 Bioinformatics Sapelo Up20.png
BiBench 0.2 Bioinformatics Sapelo Up20.png
bioawk 1.0 Bioinformatics Sapelo Up20.png
BionanoSolve 3.2.1-04122018 Bioinformatics Sapelo2 Up20.png
BioPerl 1.6.923 Bioinformatics Sapelo Up20.png
BioPerl 1.7.1 Bioinformatics Sapelo2 Up20.png
BioPython 1.66 Bioinformatics Sapelo Up20.png
BioPython 1.68 Bioinformatics Sapelo2 Up20.png
Bismark 0.16.3 Bioinformatics Sapelo Up20.png
Bison 2.7, 3.0.2, 3.0.4 Other Sapelo Up20.png
BLAST 2.2.26 Bioinformatics Teaching Up20.png
BLAST+ 2.6.0 Bioinformatics Teaching Up20.png
Blat 36 Bioinformatics Sapelo Up20.png
BLAT 3.4, 3.5 Bioinformatics Sapelo2 Up20.png
Boost 1.47.0, 1.57.0, 1.59.0 Library Sapelo Up20.png
Boost 1.54.0, 1.61.0, 1.63.0, 1.65.1 Library Sapelo2 Up20.png
bowtie 1.1.1 Bioinformatics Sapelo Up20.png
Bowtie 1.2.2 Bioinformatics Sapelo2 Up20.png
bowtie2 2.2.4 Bioinformatics Sapelo Up20.png
bowtie2 2.2.3, 2.3.3, 2.3.4.1 Bioinformatics Sapelo2 Up20.png
Bowtie2 2.3.4.1, 2.3.3, 2.2.3 Bioinformatics Teaching Up20.png
BP&P 4.0 Bioinformatics Sapelo Up20.png
braker 2.0.5 Bioinformatics Sapelo2 Up20.png
breakdancer 1.1.2_2013_03_08 Bioinformatics Sapelo Up20.png
BreakDancer 1.4.5-foss-2016b Bioinformatics Sapelo2 Up20.png
BS Seeker2 2.1.1 Bioinformatics Sapelo Up20.png
BUSCO 3.0.2 Bioinformatics Sapelo Up20.png
busco 3.0.2, 2.0 Bioinformatics Sapelo2 Up20.png
Burrows-Wheeler Aligner (BWA) 0.7.10, 0.7.15 Bioinformatics Sapelo Up20.png
BWA 0.7.15, 0.7.17 Bioinformatics Sapelo2 Up20.png
BWA 0.7.17, 0.7.15 Bioinformatics Teaching Up20.png
Caffe 12.04.2015 Other Sapelo Up20.png
Caffe 04082018 Other Sapelo2 Up20.png
Cairo 1.10.0 Bioinformatics Sapelo Up20.png
cairo 1.14.6, 1.14.10, 1.14.12 Bioinformatics Sapelo2 Up20.png
canu 1.4 Bioinformatics Sapelo Up20.png
canu 1.7 Bioinformatics Sapelo2 Up20.png
Canu 1.7, 1.6, 1.5, 1.4 Bioinformatics Teaching Up20.png
CAP-miRSeq 05/20184 Bioinformatics Sapelo2 Up20.png
cap3 03/09/2015 Bioinformatics Sapelo Up20.png
CAP3 03092015 Bioinformatics Sapelo2 Up20.png
cdhit 4.6.7 Bioinformatics Sapelo Up20.png
CD-HIT 4.6.8 Bioinformatics Sapelo2 Up20.png
CDNA_Cupcake 3.9 Bioinformatics Sapelo Up20.png
CellProfiler 2.2.0 Bioinformatics Sapelo Up20.png
censor 4.2.29 Bioinformatics Sapelo Up20.png
CENSOR 4.2.29 Bioinformatics Sapelo2 Up20.png
Centrifuge 2.3.2 Bioinformatics Sapelo Up20.png
CFOUR 1.2, 2.00-beta Chemistry Sapelo Up20.png
CGAT 0.2.4 Bioinformatics Sapelo Up20.png
CGmapTools 0.0.3b Bioinformatics Sapelo Up20.png
CheckM 1.0.5 Bioinformatics Sapelo Up20.png
Check 0.10.0 Programming Sapelo Up20.png
Chimera 1.13 Bioinformatics Sapelo2 Up20.png
Chromosomer 0.1.4a Bioinformatics Sapelo Up20.png
CIRCexplorer2 2.2.3 Bioinformatics Sapelo Up20.png
circlator 1.4.1 Bioinformatics Sapelo Up20.png
circlator 1.5.3 Bioinformatics Sapelo2 Up20.png
circos 0.69 Bioinformatics Sapelo Up20.png
Circos 0.69-6 Bioinformatics Sapelo2 Up20.png
cisa 20140304 Bioinformatics Sapelo Up20.png
Cleaveland4 4.4 Bioinformatics Sapelo Up20.png
Cleaveland4 4.4 Bioinformatics Sapelo2 Up20.png
Clustal-Omega 1.2.4 Bioinformatics Sapelo2 Up20.png
ClustalW 1.83 Bioinformatics Sapelo Up20.png
ClustalW2 2.1 Bioinformatics Sapelo2 Up20.png
clusteringConsensus 1.02 Bioinformatics Sapelo Up20.png
cmake 2.8.12.2, 3.0.2, 3.7.2, 3.9.3 Other Sapelo Up20.png
CMake 3.0.0, 3.4.3, 3.5.2, 3.6.1, 3.6.2, 3.7.2, 3.8.0, 3.9.1, 3.9.5, 3.10.2 Other Sapelo2 Up20.png
cnv-seq 03132017 Bioinformatics Sapelo Up20.png
CNVnator 0.3.3 Bioinformatics Sapelo Up20.png
CNVnator 0.3.3 Bioinformatics Sapelo2 Up20.png
CONSEL 0.20 Bioinformatics Sapelo Up20.png
Conspred v1.32 Bioinformatics Sapelo Up20.png
cortex_var 1.0.5.21 Bioinformatics Sapelo Up20.png
CPLEX 12.6.3 Engineering Sapelo Up20.png
CPLEX 12.6.3 Engineering Sapelo2 Up20.png
Croco_tools 1.0 Other Sapelo Up20.png
CrossMap 0.2.5 Bioinformatics Sapelo Up20.png
CUDA 5.0.35, 6.5.14, 7.5.18, 8.0.61 Programming Sapelo Up20.png
CUDA 7.0.28, 7.5.18, 8.0.61, 8.0.61_375.26-GCC-5.4.0-2.26, 9.0.176 Programming Sapelo2 Up20.png
cufflinks 2.2.1 Bioinformatics Sapelo Up20.png
Cufflinks 2.2.1 Bioinformatics Sapelo2 Up20.png
Cufflinks 2.2.1 Bioinformatics Teaching Up20.png
cURL 7.49.1 Other Sapelo2 Up20.png
Cutadapt 1.14 Bioinformatics Sapelo Up20.png
cutadapt 1.9.1, 1.16 Bioinformatics Sapelo2 Up20.png
cv2 3.3.0.10 Other Sapelo Up20.png
CytoScape 3.3.0 Bioinformatics Sapelo Up20.png
Danpos2 2.2.2 Bioinformatics Sapelo Up20.png
datamash 1.0.7 Other Sapelo Up20.png
DBG2OLC 20170208 Bioinformatics Teaching Up20.png
ddocent 2.2.16 Bioinformatics Sapelo Up20.png
DDSCAT 7.3.2 Chemistry Sapelo2 Up20.png
DeconSeq 0.4.3 Bioinformatics Sapelo Up20.png
deepnet 20151013 Other Sapelo Up20.png
deeptools 2.3.1 Bioinformatics Sapelo Up20.png
deepTools 3.0.2 Bioinformatics Sapelo2 Up20.png
DeFCoM 1.0.1 Bioinformatics Sapelo Up20.png
DELLY 0.7.7 Bioinformatics Sapelo Up20.png
dendropy 3.12.0 Bioinformatics Sapelo Up20.png
DendroPy 4.3.0 Bioinformatics Sapelo2 Up20.png
depict 140721 Bioinformatics Sapelo Up20.png
detect-NAHR 2015.09.16 Bioinformatics Sapelo Up20.png
DIAMOND 0.8.36 Bioinformatics Sapelo Up20.png
DIAMOND 1.0 Bioinformatics Sapelo2 Up20.png
DISCOVARdenovo 52488 Bioinformatics Sapelo2 Up20.png
DLCpar 1.0 Bioinformatics Sapelo Up20.png
DLCpar 1.0 Bioinformatics Sapelo2 Up20.png
Doxygen 1.8.7, 1.8.11, 1.8.13 Other Sapelo2 Up20.png
EMBOSS 6.5.7 Bioinformatics Sapelo Up20.png
EMBOSS 6.6.0 Bioinformatics Sapelo2 Up20.png
EMBOSS 6.6.0 Bioinformatics Teaching Up20.png
emirge 0.61.1 Bioinformatics Sapelo Up20.png
EMMAX beta beta Bioinformatics Sapelo2 Up20.png
EIGENSOFT 6.1.4 Bioinformatics Sapelo2 Up20.png
EPIG-Seq v01 Bioinformatics Sapelo Up20.png
espeak 1.48.04 Other Sapelo Up20.png
ESMF 7.0.2 Other Sapelo2 Up20.png
exabayes 1.4.1 Bioinformatics Sapelo Up20.png
ExaML 3.0.11 Bioinformatics Sapelo Up20.png
exonerate 2.2.0 Bioinformatics Sapelo Up20.png
Exonerate 2.4.0 Bioinformatics Sapelo2 Up20.png
Expander 7.11 Bioinformatics Sapelo Up20.png
FALCON 0.4.0 Bioinformatics Sapelo Up20.png
FALCON 02282018_unzip Bioinformatics Sapelo2 Up20.png
Fast-Plast 1.2.6 Bioinformatics Sapelo2 Up20.png
FASTA 36.3.5e Bioinformatics Sapelo2 Up20.png
FastME 2.1.5 Bioinformatics Sapelo Up20.png
FastME 2.1.5 Bioinformatics Sapelo2 Up20.png
fastphase 1.4.0 Bioinformatics Sapelo Up20.png
FastPlast 1.2.6 Bioinformatics Sapelo Up20.png
FastQC 0.11.4 Bioinformatics Sapelo Up20.png
FastQC 0.11.5 Bioinformatics Sapelo2 Up20.png
FASTQSim 3.0 Bioinformatics Sapelo Up20.png
fastStructure 1.0 Bioinformatics Sapelo Up20.png
FastSTRUCTURE 1.0 Bioinformatics Sapelo2 Up20.png
FastTree 2.1.10 Bioinformatics Sapelo2 Up20.png
FastX 0.0.13.2, 0.0.14 Bioinformatics Sapelo Up20.png
FASTX-Toolkit 0.0.14 Bioinformatics Sapelo2 Up20.png
FFmpeg 2.8.2 Other Sapelo Up20.png
FFmpeg 3.1.3, 3.4.1 Other Sapelo2 Up20.png
FFTW 2.1.5, 3.3.4 Math Library Sapelo Up20.png
FFTW 3.3.4, 3.3.6, 3.3.7 Math Library Sapelo2 Up20.png
FIAT 1.6.0 Other Sapelo2 Up20.png
Find_Cns 2016/07/21 Bioinformatics Sapelo Up20.png
fineRADstructure 2016/12/09 Bioinformatics Sapelo Up20.png
FineSTRUCTURE 2.0.7 Bioinformatics Sapelo Up20.png
fineSTRUCTURE 2.1.3 Bioinformatics Sapelo2 Up20.png
FLASH 1.2.11 Bioinformatics Sapelo Up20.png
FLASH 1.2.11 Bioinformatics Sapelo2 Up20.png
FLTK 1.3.4 Other, Graphics Sapelo2 Up20.png
FoX 4.1.2 Library Sapelo2 Up20.png
Freebayes 1.0.1 Bioinformatics Sapelo Up20.png
Freebayes 1.2.0 Bioinformatics Sapelo2 Up20.png
FreeSurfer 6.0.0 Medical-Informatics Sapelo Up20.png
FriBidi 1.0.1 Library Sapelo2 Up20.png
GAG 2.0.1 Bioinformatics Teaching Up20.png
gam-ngs 1.1b Bioinformatics Sapelo Up20.png
GAMESS 5Dec2014 Chemistry Sapelo Up20.png
GAMESS 14Feb2018 Chemistry Sapelo2 Up20.png
GAP 4.8.7 Other, Programming Sapelo Up20.png
GapFiller 2.1.1 Bioinformatics Sapelo Up20.png
GapFiller 2.1.1 Bioinformatics Teaching Up20.png
GAPIT 20180524 Bioinformatics Sapelo2 Up20.png
gat 1.2 Bioinformatics Sapelo Up20.png
gatk 3.6 Bioinformatics Sapelo Up20.png
GATK 3.4-0, 3.8-0, 4.0.3.0 Bioinformatics Sapelo2 Up20.png
GATK 3.8-0, 3.4-0 Bioinformatics Teaching Up20.png
GAUSSIAN 09 Chemistry Sapelo Up20.png
GAUSSIAN 09 Chemistry Sapelo2 Up20.png
GaussView 5 Chemistry Sapelo Up20.png
GAWN 0.3.2 Bioinformatics Sapelo Up20.png
Gblocks 0.91b Bioinformatics Sapelo Up20.png
GBlocks 0.91b Bioinformatics Sapelo2 Up20.png
GCTA 1.26.0 Bioinformatics Sapelo Up20.png
GCTA 1.26.0 Bioinformatics Sapelo2 Up20.png
gdal 2.1.0 Library Sapelo Up20.png
GDAL 2.1.0, 2.2.2 Library Sapelo2 Up20.png
GDC-client 1.0.1 Bioinformatics Sapelo Up20.png
gdc-client 1.3.0 Bioinformatics Sapelo2 Up20.png
gd 2.2.4 Bioinformatics Sapelo Up20.png
GD 2.66 Bioinformatics Sapelo2 Up20.png
GEM 2.5 Bioinformatics Sapelo Up20.png
Gemini 0.20.0 Bioinformatics Sapelo Up20.png
GeneMark-ES 4.33 Bioinformatics Sapelo Up20.png
GeneMark.hmm.eukaryotic 4.30 Bioinformatics Sapelo2 Up20.png
GeneMarkES 4.33 Bioinformatics Sapelo2 Up20.png
GeneMarkES 4.33 Bioinformatics Teaching Up20.png
GeneMarkS 4.30 Bioinformatics Sapelo2 Up20.png
GeneMarkS-T 4.33 Bioinformatics Sapelo2 Up20.png
Gengetopt 2.22 Other Sapelo Up20.png
GenomeTools 1.5.9 Bioinformatics Sapelo Up20.png
GenomeTools 1.5.9 Bioinformatics Sapelo2 Up20.png
Genome Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 Bioinformatics Sapelo2 Up20.png
GenomeTools 1.5.9 Bioinformatics Sapelo Up20.png
GenomicConsensus 3.0.2 Bioinformatics Sapelo Up20.png
gensim 2.3.0 Library Sapelo Up20.png
geos 3.5.0 Library Sapelo Up20.png
GEOS 3.6.2 Library Sapelo2 Up20.png
Gerud3 12202017 Bioinformatics Sapelo Up20.png
gff3ToGenePred 1.0 Bioinformatics Sapelo Up20.png
gffcompare 0.10.4 Bioinformatics Sapelo Up20.png
Gffcompare 0.10.4 Bioinformatics Sapelo2 Up20.png
GFlow 0.1.7 Library Sapelo2 Up20.png
gffread 0.9.12 Bioinformatics Sapelo2 Up20.png
git 1.7.1, 2.7.0 Other Sapelo Up20.png
GKIN 1.1 Bioinformatics Sapelo Up20.png
GLib 2.49.5, 2.53.5, 2.54.3 Library Sapelo2 Up20.png
GLPK 4.63, 4.65 Programming Sapelo2 Up20.png
gmap-gsnap 2017-01-14 Bioinformatics Sapelo Up20.png
GMAP-GSNAP 2016-11-07 Bioinformatics Sapelo2 Up20.png
GMA 0.1.5 Bioinformatics Sapelo Up20.png
GMATA 2017-01-14 Bioinformatics Sapelo Up20.png
GMP 4.3.1, 6.0.0 Library Sapelo Up20.png
GMP 4.3.2, 6.1.1, 6.1.2 Library Sapelo2 Up20.png
GMPFRXX 20081116 Library Sapelo Up20.png
GNU Compilers 4.4.7, 4.7.4, 5.3.0 Compiler Sapelo Up20.png
gnuplot 4.2.6 Bioinformatics Sapelo Up20.png
gnuplot 5.0.5 Bioinformatics Sapelo2 Up20.png
GObject-Introspection 1.49.1, 1.54.1 Other Sapelo2 Up20.png
google-cloud 0.32.0 Other Sapelo Up20.png
grace 5.1.25 Graphics Sapelo Up20.png
grace 5.1.25 Graphics Sapelo2 Up20.png
GrADS 2.1a3 Other Sapelo Up20.png
GraftM 0.10.1 Bioinformatics Sapelo Up20.png
Graphviz 2.40.1 Other Sapelo Up20.png
Graphviz 2.40.1 Other Sapelo2 Up20.png
Gromacs 5.0.2, 5.1.3 Chemistry Sapelo Up20.png
GSL 1.16 Math Library Sapelo Up20.png
GSL 1.16, 2.1, 2.3. 2.4 Math Library Sapelo2 Up20.png
GStreamer 1.14.0 Bioinformatics Sapelo2 Up20.png
GTK+ 2.24.31 Library Sapelo2 Up20.png
GTS 0.7.6 Library Sapelo2 Up20.png
Gdk-pixbuf 2.36.0 Library Sapelo2 Up20.png
Ghostscript 9.20, 9.22 Other Sapelo2 Up20.png
Guile 1.8.8 Other Sapelo2 Up20.png
h5py 2.6.0 Other Sapelo Up20.png
hapcut2 20170126 Bioinformatics Sapelo Up20.png
Haploview 4.2 Bioinformatics Sapelo Up20.png
harp 130306_105556 Bioinformatics Sapelo Up20.png
HDF5 1.8.6, 1.8.14 Library Sapelo Up20.png
HGTFinder 20170929 Bioinformatics Sapelo Up20.png
HH-suite 3.0 Bioinformatics Sapelo Up20.png
hic-pro 2.8.0 Bioinformatics Sapelo Up20.png
HiCUP 0.5.9 Bioinformatics Sapelo Up20.png
hindex 1.42 Bioinformatics Sapelo2 Up20.png
HINGE 032717 Bioinformatics Sapelo Up20.png
HipMer 0.9.4 Bioinformatics Sapelo Up20.png
HISAT2 2.1.0 Bioinformatics Sapelo Up20.png
HISAT2 2.1.0 Bioinformatics Sapelo2 Up20.png
Hmmer 3.1b2 Bioinformatics Sapelo Up20.png
HMMER 3.1b2 Bioinformatics Sapelo2 Up20.png
Homer 4.8 Bioinformatics Sapelo Up20.png
Homer 4.9.1, 4.10 Bioinformatics Sapelo2 Up20.png
HPCGridRunner 1.0.2 Tools Sapelo Up20.png
HPCGridRunner 1.0.2 Tools Sapelo2 Up20.png
htseq 0.6.1p1 Bioinformatics Sapelo Up20.png
HTSeq 0.9.1 Bioinformatics Sapelo2 Up20.png
HUMAnN2 0.6.1 Bioinformatics Sapelo Up20.png
HyDe 1.0 Bioinformatics Sapelo Up20.png
HyPhy 2.3.5 Bioinformatics Sapelo Up20.png
IDBA 1.1.2 Bioinformatics Sapelo Up20.png
IGV 2.3.81 Bioinformatics Sapelo Up20.png
IGV 2.4.4 Bioinformatics Sapelo2 Up20.png
IGVTools 2.3.81 Bioinformatics Sapelo Up20.png
IGVTools 2.3.98 Bioinformatics Sapelo2 Up20.png
illumiprocessor 2.0.7 Bioinformatics Sapelo Up20.png
Infernal 1.1.2 Bioinformatics Sapelo2 Up20.png
Intel Compilers 14.0.0, 15.0.2 Compiler Sapelo Up20.png
iprscan (InterProScan) 5.16-55.0 Bioinformatics Sapelo Up20.png
iprscan (InterProScan) 5.29-68.0 Bioinformatics Sapelo2 Up20.png
ipyrad 0.3.7, 0.5.15, 0.7.3 Bioinformatics Sapelo Up20.png
ipyrad 0.7.24 Bioinformatics Sapelo2 Up20.png
IQ-Tree 1.5.5, 1.6.1 Bioinformatics Sapelo Up20.png
IQ-Tree 1.5.5, 1.6.5 Bioinformatics Sapelo2 Up20.png
iRep 1.10 Bioinformatics Sapelo Up20.png
I-TASSER 5.0 Bioinformatics Sapelo Up20.png
IsoSeq_SA3nUP 09272017 Bioinformatics Sapelo Up20.png
ITSTool 2.0.4 Utility Sapelo2 Up20.png
iva 1.0.3 Bioinformatics Sapelo Up20.png
JAGS 3.4.0, 4.1.0, 4.2.0 Statistics Sapelo Up20.png
JAGS 4.3.0 Statistics Sapelo2 Up20.png
JasPer 1.900.1 Other Sapelo Up20.png
JasPer 1.900.1, 2.0.12 Other Sapelo2 Up20.png
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Jellyfish 2.2.6 Bioinformatics Sapelo2 Up20.png
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MCScanX 0.8 Bioinformatics Sapelo Up20.png
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Metal 20110325 Bioinformatics Sapelo Up20.png
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MHAP 2.1.1 Bioinformatics Sapelo Up20.png
Migrate 3.6.11 Bioinformatics Sapelo Up20.png
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picrust 1.1.0 Bioinformatics Sapelo Up20.png
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platypus 0.8.1 Bioinformatics Sapelo Up20.png
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Primer3 2.3.7 Bioinformatics Sapelo2 Up20.png
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PRINSEQ 0.20.4 Bioinformatics Sapelo2 Up20.png
ProbABEL 0.5.0 Bioinformatics Sapelo Up20.png
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Prodigal 2.6.3 Bioinformatics Sapelo2 Up20.png
proovread 2.12 Bioinformatics Sapelo Up20.png
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pybedtools 09/22/2016 Bioinformatics Sapelo Up20.png
pybedtools 0.7.10 Bioinformatics Sapelo2 Up20.png
pyDNase 0.2.5 Bioinformatics Sapelo Up20.png
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pyfasta 0.5.2 Bioinformatics Sapelo Up20.png
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Pysam 0.10.0, 0.13 Bioinformatics Sapelo2 Up20.png
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randfold 2.0.1 Bioinformatics Sapelo2 Up20.png
RAPSearch2 2.23 Bioinformatics Sapelo Up20.png
RATT 10052017 Bioinformatics Sapelo Up20.png
RATT 20180710 Bioinformatics Sapelo2 Up20.png
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Ray 2.3.1 Bioinformatics Sapelo Up20.png
Rcorrector 1.0.2 Bioinformatics Sapelo2 Up20.png
RDPTools 2.2.0 Bioinformatics Sapelo Up20.png
READemption 0.3.7 Bioinformatics Sapelo Up20.png
RED 1.0 Bioinformatics Sapelo Up20.png
REAPR 1.0.18 Bioinformatics Sapelo Up20.png
REAPR 1.0.18 Bioinformatics Sapelo2 Up20.png
RECON 1.08 Bioinformatics Sapelo2 Up20.png
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Repeatmodeler 1.0.8 Bioinformatics Sapelo Up20.png
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RepeatScout 1.0.5 Bioinformatics Sapelo2 Up20.png
RepeatScout 1.05 Bioinformatics Teaching Up20.png
REPET 2.5 Bioinformatics Sapelo2 Up20.png
RepeatScout 1.05 Bioinformatics Sapelo2 Up20.png
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Revbayes 1.0.5 Bioinformatics Sapelo Up20.png
RGT 0.11.2 Bioinformatics Sapelo Up20.png
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RNAmmer 1.2 Bioinformatics Sapelo Up20.png
RNAmmer 1.2 Bioinformatics Sapelo2 Up20.png
RNAple 0.2 Bioinformatics Sapelo Up20.png
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RSEM 1.2.20 Bioinformatics Sapelo Up20.png
RSEM 1.3.0 Bioinformatics Sapelo2 Up20.png
RSeQC 2.6.4 Bioinformatics Sapelo Up20.png
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runBNG 1.03 Bioinformatics Sapelo2 Up20.png
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Salmon 0.8.2 Bioinformatics Sapelo2 Up20.png
sam2pairwise 1.0.0 Bioinformatics Sapelo Up20.png
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scalpel 0.5.3 Bioinformatics Sapelo Up20.png
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seqtk 1.2 Bioinformatics Sapelo2 Up20.png
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shapeit v2.r837 Bioinformatics Sapelo Up20.png
SHORE 0.9.3 Bioinformatics Sapelo Up20.png
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sicer 1.1 Bioinformatics Sapelo Up20.png
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SNPhylo 20160204 Bioinformatics Sapelo2 Up20.png
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SortMeRNA 2.1 Bioinformatics Sapelo2 Up20.png
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SRAToolKit 2.8.2-1 Bioinformatics Sapelo Up20.png
SRAToolKit 2.8.2-1, 2.9.1 Bioinformatics Sapelo2 Up20.png
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SSPACE 2.1.1 Bioinformatics Sapelo2 Up20.png
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StringTie 1.3.3 Bioinformatics Sapelo2 Up20.png
structure 2.3.4 Bioinformatics Sapelo Up20.png
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subread 1.5.2 Bioinformatics Sapelo Up20.png
Subread 1.6.2 Bioinformatics Sapelo2 Up20.png
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SUNTANS 20180305 Other Sapelo2 Up20.png
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SVDetect 0.7 Bioinformatics Sapelo Up20.png
SVDetect 0.7 Bioinformatics Sapelo2 Up20.png
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Tandem Repeats Finder 4.09 Bioinformatics Sapelo Up20.png
tassel 5.2.42 Bioinformatics Sapelo Up20.png
TASSEL 5.2.44 Bioinformatics Sapelo2 Up20.png
Tbl2asn 04172018 Bioinformatics Sapelo2 Up20.png
TensorFlow 1.8.0 Other Sapelo2 Up20.png
TensorFlow-models 20180620 Other Sapelo2 Up20.png
TEPID 0.6 Bioinformatics Sapelo Up20.png
tesseract 3.04.01 Bioinformatics Sapelo Up20.png
Theano 0.8.0 Other Sapelo Up20.png
TIGRA 0.4.0 Bioinformatics Sapelo Up20.png
TMHMM 2.0c Bioinformatics Sapelo2 Up20.png
TOFU2 3.9 Bioinformatics Sapelo Up20.png
tophat 2.0.14 Bioinformatics Sapelo Up20.png
Tophat 2.1.1 Bioinformatics Sapelo2 Up20.png
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TPP 5.1.0 Bioinformatics Sapelo2 Up20.png
TransDecoder 2.0.1 Bioinformatics Sapelo Up20.png
TransDecoder 2.1.0 Bioinformatics Sapelo2 Up20.png
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TransposonPSI 08222010 Bioinformatics Sapelo Up20.png
Transrate 1.0.1 Bioinformatics Sapelo Up20.png
TreeMix 1.13 Bioinformatics Sapelo Up20.png
TrimGalore 0.4.4 Bioinformatics Sapelo Up20.png
trimmomatic 0.36 Bioinformatics Sapelo Up20.png
Trimmomatic 0.36 Bioinformatics Sapelo2 Up20.png
TrimGalore 4.0 Bioinformatics Sapelo Up20.png
Trim_Galore 0.4.5 Bioinformatics Sapelo2 Up20.png
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Trinotate 3.1.1 Bioinformatics Sapelo Up20.png
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TRNAscan-SE 2.0.0 Bioinformatics Sapelo2 Up20.png
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usearch 10.0.240 Bioinformatics Sapelo Up20.png
UCSC 06-17-2015 Bioinformatics Sapelo Up20.png
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VarScan 2.4.2 Bioinformatics Sapelo2 Up20.png
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vcflib 1.0.0-rc1 Bioinformatics Sapelo Up20.png
vcflib 20180410 Bioinformatics Sapelo2 Up20.png
vcftools 0.1.12b Bioinformatics Sapelo Up20.png
VCFtools 0.1.15 Bioinformatics Sapelo2 Up20.png
vcf2diploid 0.2.6a Chemistry Sapelo2 Up20.png
vcf2phylip 1.5 Bioinformatics Sapelo2 Up20.png
VCFtools 0.1.15 Bioinformatics Teaching Up20.png
velvet 1.2.10 Bioinformatics Sapelo Up20.png
Velvet 1.2.10 Bioinformatics Sapelo2 Up20.png
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ViennaRNA 2.1.3 Bioinformatics Sapelo Up20.png
ViennaRNA 2.4.3, 2.4.6 Bioinformatics Sapelo2 Up20.png
viromescan 05292017 Bioinformatics Sapelo Up20.png
Vmatch 2.3.0 Bioinformatics Sapelo2 Up20.png
voxnet 0.1 Other Sapelo Up20.png
vsearch 1.10.1 Bioinformatics Sapelo Up20.png
VSEARCH 2.8.1 Bioinformatics Sapelo2 Up20.png
wgs 8.2 Bioinformatics Sapelo Up20.png
whatshap 0.12 Bioinformatics Sapelo Up20.png
WinHap 2.0 Bioinformatics Sapelo Up20.png
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WRF 3.6, 3.6.1, 3.7, 3.8 Other Sapelo Up20.png
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WRF-Chem 3.6.1, 3.8 Other Sapelo Up20.png
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WU Blast 2.2.6 Bioinformatics Sapelo Up20.png
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xforms 1.2.4 Graphics Sapelo2 Up20.png
YAHA 0.1.83 Bioinformatics Sapelo Up20.png
YASRA 2.33 Bioinformatics Sapelo Up20.png
YASRA 2.33 Bioinformatics Sapelo2 Up20.png
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