Software-old: Difference between revisions
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| [[SignalIP]] || 4.1c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SignalIP]] || 4.1c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SISRS]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SISRS]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SiZer]] || 07022012 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SiZer]] || 07022012 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[slclust]] || 04282012 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[slclust]] || 04282012 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SMRT-Analysis-Sapelo|SMRT-Analysis]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SMRT-Analysis-Sapelo|SMRT-Analysis]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SMRT-Analysis]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SMRT-Analysis]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SNAP]] || 2010-7-28 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SNAP]] || 2010-7-28 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SNAPP]] || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SNAPP]] || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SnoReport]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SnoReport]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[snow]] || 0.3-8, 0.3-10, 0.3-12, 0.3-13 || [[:Category:Statistics|Statistics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[snow]] || 0.3-8, 0.3-10, 0.3-12, 0.3-13 || [[:Category:Statistics|Statistics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[snowhite]] || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[snowhite]] || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[snpEff]] || 4.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[snpEff]] || 4.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SNPhylo]] || 20140701 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SNPhylo]] || 20140701 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[Soap2]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Soap2]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPaligner-Sapelo | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPaligner-Sapelo | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[Soap2 | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Soap2 | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPdenovo]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPdenovo]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPdenovo-trans]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPdenovo-trans]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPdenovo2-Sapelo|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPdenovo2-Sapelo|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPdenovo2]] || r223, r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPdenovo2]] || r223, r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SOAPsnp]] || 1.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPsnp]] || 1.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SomaticCall]] || 42811 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SomaticCall]] || 42811 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SortMeRNA-Sapelo|SortMeRNA]] || 2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SortMeRNA-Sapelo|SortMeRNA]] || 2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[Spark-Sapelo|Spark]] || 1.6.0, 2.0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[Spark-Sapelo|Spark]] || 1.6.0, 2.0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[spimap]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[spimap]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SPAdes-Sapelo|SPAdes]] || 3.7.0, 3.8.0, 3.9.0, 3.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SPAdes-Sapelo|SPAdes]] || 3.7.0, 3.8.0, 3.9.0, 3.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SPAdes]] || 3.6.2, 3.8.0, 3.9.0, 3.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SPAdes]] || 3.6.2, 3.8.0, 3.9.0, 3.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SparseAssembler]] || 2012/06/15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SparseAssembler]] || 2012/06/15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[sprai]] || 0.9.9.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[sprai]] || 0.9.9.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[Splitaake]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Splitaake]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[spolpred]] || 09/10/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[spolpred]] || 09/10/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[sprspace]] || 1.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[sprspace]] || 1.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[Sputnik]] || 03/20/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Sputnik]] || 03/20/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SRAToolKit-Sapelo |SRAToolKit ]] || 2.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SRAToolKit-Sapelo |SRAToolKit ]] || 2.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SRA]] || 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SRA]] || 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SSAHA2]] || 2.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SSAHA2]] || 2.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SSAKE]] || v3-8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SSAKE]] || v3-8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SSPACE]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SSPACE]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[ssr_pipeline]] ||0.95 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[ssr_pipeline]] ||0.95 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[stacks-Sapelo|stacks]] || 1.40, 1.44 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[stacks-Sapelo|stacks]] || 1.40, 1.44 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[stacks]] || 1.35 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[stacks]] || 1.35 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STAMP-Sapelo | STAMP]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[STAMP-Sapelo | STAMP]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STAMPY]] || 1.0.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[STAMPY]] || 1.0.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STAR-Sapelo|STAR]] || 2.4.2a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[STAR-Sapelo|STAR]] || 2.4.2a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STAR]] || 2.4.1c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[STAR]] || 2.4.1c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STEM]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[STEM]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[STEM-hy]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[STEM-hy]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[strauto]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[strauto]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[StringTie-Sapelo|StringTie]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[StringTie-Sapelo|StringTie]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[StringTie]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[StringTie]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[structure-Sapelo|structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[structure-Sapelo|structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[structurama]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[structurama]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[subread]] || 1.4.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[subread]] || 1.4.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[suma_package]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[suma_package]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SUNTANS-Sapelo|SUNTANS]] || 20150923 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SUNTANS-Sapelo|SUNTANS]] || 20150923 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SUNTANS]] || 697-trunk, 784 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SUNTANS]] || 697-trunk, 784 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SuperLU]] || 4.3 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SuperLU]] || 4.3 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SuperLU_dist]] || 3.3 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SuperLU_dist]] || 3.3 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[SUPPA-Sapelo|SUPPA]] || 06122015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[SUPPA-Sapelo|SUPPA]] || 06122015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SVDetect]] || r0.7m || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SVDetect]] || r0.7m || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SVDquartets]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SVDquartets]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SWIG]] || 3.0.2 || [[:Category:Programming|Programming]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[SWIG]] || 3.0.2 || [[:Category:Programming|Programming]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| <span id="T"></span>[[T-Coffee]] || 9.03.r1318 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | <span id="T"></span>[[T-Coffee]] || 9.03.r1318 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tabix]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tabix]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[TagCleaner]] || 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TagCleaner]] || 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TRE |Tandem Repeats Finder]] || 4.07b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TRE |Tandem Repeats Finder]] || 4.07b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TAPDANCE]] || 03/20/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TAPDANCE]] || 03/20/2013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[tassel]] || 5.2.20 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tassel]] || 5.2.20 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tax2tree]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tax2tree]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TEClass]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TEClass]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TEPID-Sapelo|TEPID]] || 0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[TEPID-Sapelo|TEPID]] || 0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TEMP]] || 1.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TEMP]] || 1.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tesseract-Sapelo|tesseract]] || 3.04.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[tesseract-Sapelo|tesseract]] || 3.04.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TEToolkit]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TEToolkit]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tgicl]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tgicl]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Theano-Sapelo|Theano]] || 0.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[Theano-Sapelo|Theano]] || 0.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Theano]] || 0.8.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Theano]] || 0.8.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TIGER]] || 1.02 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TIGER]] || 1.02 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tmhmm]] || 2.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tmhmm]] || 2.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tophat-Sapelo|tophat]] || 2.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[tophat-Sapelo|tophat]] || 2.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tophat]] || 2.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tophat]] || 2.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[trans-abyss]] || 1.4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[trans-abyss]] || 1.4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TransDecoder-Sapelo|TransDecoder]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[TransDecoder-Sapelo|TransDecoder]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TransDecoder]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TransDecoder]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Transposome-Sapelo|Transposome]] || 0.09.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[Transposome-Sapelo|Transposome]] || 0.09.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TransposonPSI-Sapelo|TransposonPSI]] || 08222010 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[TransposonPSI-Sapelo|TransposonPSI]] || 08222010 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Transrate-Sapelo|Transrate]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[Transrate-Sapelo|Transrate]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Tracer]] || v 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Tracer]] || v 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TRE]] || 4.07b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TRE]] || 4.07b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TreeFix]] || 1.1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TreeFix]] || 1.1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TreeFix-DTL]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TreeFix-DTL]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[treemix]] || 1.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[treemix]] || 1.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Triangle]] || 1.6 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Triangle]] || 1.6 || [[:Category:Math_Library|Math Library]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[trimal]] || 1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[trimal]] || 1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[trimmomatic-Sapelo|trimmomatic]] || 0.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[trimmomatic-Sapelo|trimmomatic]] || 0.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[trimmomatic]] || 0.32 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[trimmomatic]] || 0.32 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TrimGalore-Sapelo|TrimGalore]] || 4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[TrimGalore-Sapelo|TrimGalore]] || 4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TrimGalore]] || 0.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[TrimGalore]] || 0.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[trimreads]] || 07232013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[trimreads]] || 07232013 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trinity-Sapelo|Trinity]] || 2.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[Trinity-Sapelo|Trinity]] || 2.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trinity]] || 2.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Trinity]] || 2.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trinotate]] || 3.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Trinotate]] || 3.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[tRNAscan-SE]] || 1.23, 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[tRNAscan-SE]] || 1.23, 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="U"></span>[[UClust]] || 1.2.22q || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | <span id="U"></span>[[UClust]] || 1.2.22q || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[UNAFold]] || 3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[UNAFold]] || 3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[UPP]] || 2.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[UPP]] || 2.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[usearch-Sapelo|usearch]] || 8.0.1623 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[usearch-Sapelo|usearch]] || 8.0.1623 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[usearch]] || 7.0.1090_i86 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[usearch]] || 7.0.1090_i86 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[UCSC-Sapelo|UCSC]] || 06-17-2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[UCSC-Sapelo|UCSC]] || 06-17-2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[UCSC]] || 07-11-2014 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[UCSC]] || 07-11-2014 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="V"></span>[[varscan]] || 2.3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | <span id="V"></span>[[varscan]] || 2.3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[vcftools-Sapelo|vcftools]] || 0.1.12b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[vcftools-Sapelo|vcftools]] || 0.1.12b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[vcftools]] || 0.1.12a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[vcftools]] || 0.1.12a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[velvet-Sapelo|velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[velvet-Sapelo|velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[velvet]] || 1.2.08, 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[velvet]] || 1.2.08, 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VelvetOptimiser-Sapelo|VelvetOptimiser]] || 2.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[VelvetOptimiser-Sapelo|VelvetOptimiser]] || 2.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VelvetOptimiser]] || 2.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[VelvetOptimiser]] || 2.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ensembl-tools | VEP]] || 76 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[ensembl-tools | VEP]] || 76 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VICUNA]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[VICUNA]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ViennaRNA]] || 1.8.5, 2.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[ViennaRNA]] || 1.8.5, 2.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[virtualenv]] || 1.8.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[virtualenv]] || 1.8.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VMD]] || 1.9.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[VMD]] || 1.9.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[voxnet-Sapelo|voxnet]] || 0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[voxnet-Sapelo|voxnet]] || 0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[voxnet]] || 0.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[voxnet]] || 0.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[vsearch-Sapelo|vsearch]] || 1.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[vsearch-Sapelo|vsearch]] || 1.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[vsearch]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[vsearch]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VTK]] || 5.8.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[VTK]] || 5.8.0 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="W"></span>[[webLogo]] || 3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | <span id="W"></span>[[webLogo]] || 3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[weka]] || 3.6.10 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[weka]] || 3.6.10 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[wgs-Sapelo|wgs]] || 8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[wgs-Sapelo|wgs]] || 8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[wgs]] || 8.2beta-binary || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[wgs]] || 8.2beta-binary || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[whatshap-Sapelo|whatshap]] || 0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[whatshap-Sapelo|whatshap]] || 0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[wigToBigWig]] || v4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[wigToBigWig]] || v4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WinHap-Sapelo|WinHap]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[WinHap-Sapelo|WinHap]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WISE2]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[WISE2]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WPS-Sapelo|WPS]] || 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[WPS-Sapelo|WPS]] || 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WPS]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[WPS]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WRF-Sapelo|WRF]] || 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[WRF-Sapelo|WRF]] || 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WRF]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[WRF]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WRF-Chem-Sapelo|WRF-Chem]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[WRF-Chem-Sapelo|WRF-Chem]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WU Blast-Sapelo|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[WU Blast-Sapelo|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="X"></span> [[RDPTools-Sapelo|Xander_assembler]] || 7/12/2016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | <span id="X"></span> [[RDPTools-Sapelo|Xander_assembler]] || 7/12/2016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[xgboost]] || 0.4a30 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[xgboost]] || 0.4a30 || [[:Category:Other|Other]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[XP-CLR-Sapelo|XP-CLR]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[XP-CLR-Sapelo|XP-CLR]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Xscape]] || 11182014 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Xscape]] || 11182014 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="Y"></span>[[yasra]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | <span id="Y"></span>[[yasra]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[yt-Sapelo|yt]] || 3.2.3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[yt-Sapelo|yt]] || 3.2.3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | | [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Zorro]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | | [[Zorro]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]] | ||
<!--LIST END--> | <!--LIST END--> | ||
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Revision as of 11:04, 23 February 2017
Installed Software List
Last updated 2017-02-23. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z