Software2

Installed Software List

Last updated 2018-08-07. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name	Version	Category	Cluster
BCFtools	1.8 , 1.6, 1.3.1, 1.8, 1.6, 1.3.1	Bioinformatics	Teaching
Biopython	1.68 , 1.68, 1.68, 1.68	Bioinformatics	Teaching
Bowtie2	2.3.4.1 , 2.3.3, 2.2.3	Bioinformatics	Teaching
BWA	0.7.17 , 0.7.15	Bioinformatics	Teaching
Canu	1.7 , 1.6, 1.5, 1.4, 1.7, 1.6, 1.5, 1.4	Bioinformatics	Teaching
GATK	3.8-0 , 3.4-0, 3.8-0, 3.4-0	Bioinformatics	Teaching
Java	1.8.0_144 , 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92, 1.8.0_144, 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92	Other	Teaching
MAFFT	7.313 , 7.273, 7.130, 7.313, 7.273, 7.130	Bioinformatics	Teaching
Perl	5.26.1 , 5.26.1, 5.26.0, 5.24.1, 5.24.0, 5.20.3, 5.26.1, 5.26.1, 5.26.0, 5.24.1, 5.24.0, 5.20.3	Other	Teaching
Python	3.6.4 , 3.5.2, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.12, 3.6.4, 3.5.2, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.12	Other	Teaching
RAxML	8.2.11 , 8.2.11, 8.2.11, 8.2.11	Bioinformatics	Teaching
SAMtools	1.6 , 1.3.1, 1.3.1, 0.1.19, 1.6, 1.3.1, 1.3.1, 0.1.19	Bioinformatics	Teaching
Stacks	2.0 , 1.48	Bioinformatics	Teaching
STAR	2.6.0c , 2.5.3a	Bioinformatics	Teaching
SWIG	3.0.2	Programming	Zcluster
T-Coffee	11.00.8cbe486	Bioinformatics	Sapelo
T-REX	1.0	Bioinformatics	Sapelo
tabix	0.2.5	Bioinformatics	Zcluster
Zbar	0.10	Graphics	Sapelo
zlib	1.2.5, 1.2.8	Library	Sapelo
Zorro	2.2	Bioinformatics	Zcluster

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