BWA: Difference between revisions

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(Created page with "hg19 is indexed at /usr/local/bwa/latest/hg19/ <pre class="gcommand"> /usr/local/bwa/0.7.4/bwa index -p hh19 -a bwtsw hg19.fa </pre>")
 
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hg19 is indexed at /usr/local/bwa/latest/hg19/
hg19 is indexed at /db/hg/hg19
<pre class="gcommand">
<pre class="gcommand">
/usr/local/bwa/0.7.4/bwa index -p hh19 -a bwtsw hg19.fa
/usr/local/bwa/latest/bwa index -p h19 -a bwtsw /db/hg/hg19/hg19.fa
</pre>
</pre>

Latest revision as of 11:51, 17 February 2014

hg19 is indexed at /db/hg/hg19

/usr/local/bwa/latest/bwa index -p h19 -a bwtsw /db/hg/hg19/hg19.fa