Software-old: Difference between revisions
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You can also use the command above to search for a specific application. For more information, please see [[Lmod]]. | You can also use the command above to search for a specific application. For more information, please see [[Lmod]]. | ||
'''Note:''' Although we have not made individual software pages for the applications installed on on the Slurm test cluster (Sap2test), there are currently over 550 software packages installed there. For information on software installed there, please see [[Software on sap2test]]. | |||
==Installed Software List== | ==Installed Software List== | ||
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|- | |- | ||
<!--LIST BEGIN--> | <!--LIST BEGIN--> | ||
| <span id ="0"></span>[[ | <!-- | ||
| <span id ="0"></span>[[3D-DNA-sapelo2 |3D-DNA]] || 180922 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| <span id ="A">[[ABySS-Sapelo2|ABySS]] || 1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[3SEQ-Sapelo2 |3SEQ]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[4p-Sapelo2 |4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| <span id ="A"></span>[[ABySS-Sapelo2|ABySS]] || 1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ADMIXTURE-Sapelo2|ADMIXTURE]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ADMIXTURE-Sapelo2|ADMIXTURE]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
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|- | |- | ||
| [[AFNI-Sapelo2|AFNI]] || 17.3.05 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[AFNI-Sapelo2|AFNI]] || 17.3.05 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[AGAT-Sapelo2|AGAT]] || 0.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[AGEnt-Sapelo2|AGEnt]] || 0.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[AIM-HII-Sapelo2|AIM-HII]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[albacore-Sapelo2|Albacore]] || 2.3.4-cp35 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[AlignGraph-Sapelo2|AlignGraph]] || 20180709 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[AlignGraph-Sapelo2|AlignGraph]] || 20180709 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[AlleleSeq_pipeline-Sapelo2|AlleleSeq_pipeline]] || 1.2a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[AlleleSeq_pipeline-Sapelo2|AlleleSeq_pipeline]] || 1.2a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ALLHiC-Sapelo2|ALLHiC]] || 0.8.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Allim-Sapelo2|Allim]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Allim-Sapelo2|Allim]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[ALLMAPS-Sapelo2|ALLMAPS]] || 20190208 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[AMBER-Sapelo2|AMBER]] || 14, 16, 18 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
<!-- | [[AMBER-Teaching|AMBER]] || 14 || [[:Category:Chemistry|Chemistry]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
<!-- | |||
| [[AMOS-Sapelo2|AMOS]] || 3.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[AMOS-Sapelo2|AMOS]] || 3.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Anaconda2-Sapelo2|Anaconda2]] || 5.0.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Anaconda2-Sapelo2|Anaconda2]] || 5.0.1, 2018.12, 2019.03 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Anaconda3-Sapelo2|Anaconda3]] || 5.0.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Anaconda3-Sapelo2|Anaconda3]] || 5.0.1, 2018.12, 2019.03 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ANGEL-Sapelo2|ANGEL]] || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[annovar-Sapelo2|annovar]] || 2017Jul16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[annovar-Sapelo2|annovar]] || 2017Jul16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[anvi'o-Sapelo2|anvi'o]] || 4, 5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ANSYS-Sapelo2|ANSYS]] || 18.2, 19.2 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[antiSMASH-Sapelo2|antiSMASH]] || 4.2.0, 5.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[anvi'o-Sapelo2|anvi'o]] || 4, 5.1, 5.3, 5.4, 6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Apollo-Sapelo2|Apollo]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Aragorn-Sapelo2|Aragorn]] || 1.2.38 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Aragorn-Sapelo2|Aragorn]] || 1.2.38 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
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|- | |- | ||
| [[ART-Sapelo2|ART]] || 20160605 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ART-Sapelo2|ART]] || 20160605 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ARCS-Sapelo2|ARCS]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Artemis-Sapelo2|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Artemis-Sapelo2|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Artemis-Teaching|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | --> | ||
|- | <!-- | [[Artemis-Teaching|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
<!-- | |||
| [[ASTRAL-Sapelo2|ASTRAL]] || 5.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ASTRAL-Sapelo2|ASTRAL]] || 5.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
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| [[ATLAS-Sapelo2|ATLAS]] || 3.10.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ATLAS-Sapelo2|ATLAS]] || 3.10.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[AUGUSTUS-Sapelo2|AUGUSTUS]] || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[AUGUSTUS-Sapelo2|AUGUSTUS]] || 3.2.3, 3.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
<!-- | [[AUGUSTUS-Teaching|AUGUSTUS]] || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
<!-- | |||
| [[AutoVOT-Sapelo2|AutoVOT]] || 0.93 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | <span id ="B"></span> [[bam2fastx-Sapelo2|bam2fastx]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[BamTools-Sapelo2|BamTools]] || 2.4.1, 2.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Barrnap-Sapelo2|Barrnap]] || 0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Barrnap-Sapelo2|Barrnap]] || 0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[basespace-cli-Sapelo2|basespace-cli]] || 0.9.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[basespace-cli-Sapelo2|basespace-cli]] || 0.9.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Basset-Sapelo2|Basset]] || 20200107 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[BayesAss-Sapelo2|BayesAss]] || 3.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BayesAss-Sapelo2|BayesAss]] || 3.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[BayeScan-Sapelo2|BayeScan]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[bax2bam-Sapelo2|bax2bam]] || 0.0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Bazel-Sapelo2|Bazel]] || 0.8.1, 0.11.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Bazel-Sapelo2|Bazel]] || 0.8.1, 0.11.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BBMap-Sapelo2 |BBMap]] || 37.67 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BBMap-Sapelo2 |BBMap]] || 37.67, 38.73 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BCFtools-Sapelo2|BCFtools]] || 1.1, 1.3.1, 1.6, 1.8, 1.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BCFtools-Sapelo2|BCFtools]] || 1.1, 1.3.1, 1.6, 1.8, 1.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BCFtools-Teaching|BCFtools]] || 1.3.1, 1.6, 1.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | --> | ||
<!-- | [[BCFtools-Teaching|BCFtools]] || 1.3.1, 1.6, 1.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
<!-- | |||
| [[bcgTree-Sapelo2|bcgTree]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[bcl2fastq-Sapelo2|bcl2fastq]] || 2.20.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[bcl2fastq-Sapelo2|bcl2fastq]] || 2.20.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Beast-Sapelo2|Beast]] || 1.8.4, 1.10.1, 1.10.3, 1.10.4, 2.4.8pre, 2.4.8, 2.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Beast-Sapelo2|Beast]] || 1.8.4, 1.10.1, 1.10.3, 1.10.4, 2.4.8pre, 2.4.8, 2.5.0, 2.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BEDOPS-Sapelo2|BEDOPS]] || 2.4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BEDOPS-Sapelo2|BEDOPS]] || 2.4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BEDTools-Sapelo2|BEDTools]] || 2.26.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BEDTools-Sapelo2|BEDTools]] || 2.17.0, 2.26.0, 2.28.0, 2.29.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[BEDTools-Teaching|BEDTools]] || 2.26.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[BEDTools-Teaching|BEDTools]] || 2.26.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
<!-- | |||
| [[BerkeleyGW-Sapelo2|BerkeleyGW]] || 2.1 || [[:Category:Physics|Physics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Bioawk-Sapelo2|bioawk]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Bioawk-Sapelo2|bioawk]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
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| [[BioKanga-Sapelo2|BioKanga]] || 21.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BioKanga-Sapelo2|BioKanga]] || 21.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BionanoSolve-Sapelo2|BionanoSolve]] || 3.2.1-04122018, 3.2.2-08222018 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Biom-format-Sapelo2|Biom-format]] || 2.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[BionanoSolve-Sapelo2|BionanoSolve]] || 3.2.1-04122018, 3.2.2-08222018 3.3-10252018, 3.4-06042019 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[BioPerl-Sapelo2|BioPerl]] || 1.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BioPerl-Sapelo2|BioPerl]] || 1.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[BioPerl-Teaching|BioPerl]] || 1.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[BioPerl-Teaching|BioPerl]] || 1.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BioPython-Sapelo2|BioPython]] || 1.68 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BioPython-Sapelo2|BioPython]] || 1.68 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Biopython-Teaching|Biopython]] || 1.75 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | <!-- | ||
|- | | [[Bismark-Sapelo2|Bismark]] || 0.20.0, 0.22.1, 0.22.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
<!-- | [[Bismark-Teaching|Bismark]] || 0.22.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
<!-- | |||
| [[Bison-Sapelo2|Bison]] || 2.7, 3.0.2, 3.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Bison-Sapelo2|Bison]] || 2.7, 3.0.2, 3.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BLASR-Sapelo2|BLASR]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BLASR-Sapelo2|BLASR]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BLAST+-Sapelo2|BLAST+]] || 2.6.0, 2.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BLAST+-Sapelo2|BLAST+]] || 2.2.31, 2.6.0, 2.7.1, 2.9.0, 2.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[BLAST+-Teaching|BLAST+]] || 2. | | [[BLAST+-Teaching|BLAST+]] || 2.9.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | |||
| [[BLAST-Sapelo2|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BLAST-Sapelo2|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[BLAST-Teaching|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | | [[BLAST-Teaching|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BLAT-Sapelo2|BLAT]] || 3.4, 3.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BLAT-Sapelo2|BLAT]] || 3.4, 3.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[BlobTools-Sapelo2|BlobTools]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Blosc-Sapelo2|Blosc]] || 1.12.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Blosc-Sapelo2|Blosc]] || 1.12.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[BOLT-LMM-Sapelo2|BOLT-LMM]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Boost-Sapelo2|Boost]] || 1.54.0, 1.61.0, 1.63.0, 1.65.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Boost-Sapelo2|Boost]] || 1.54.0, 1.61.0, 1.63.0, 1.65.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 127: | Line 193: | ||
| [[Boto3-Sapelo2|Boto3]] || 1.9.14 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Boto3-Sapelo2|Boto3]] || 1.9.14 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[bowtie2-Sapelo2|bowtie2]] || 2.2.3, 2.3.3, 2.3.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[bowtie2-Sapelo2|bowtie2]] || 2.2.3, 2.3.3, 2.3.4.1, 2.3.4.2, 2.3.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Bowtie2-Teaching|Bowtie2]] || | | [[Bowtie2-Teaching|Bowtie2]] || 2.3.5.1, 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Bowtie-Sapelo2|Bowtie]] || 1.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Bowtie-Sapelo2|Bowtie]] || 1.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[braker-Sapelo2|braker]] || 2.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Bracken-Sapelo2|Bracken]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[braker-Sapelo2|braker]] || 2.0.5, 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[BreakDancer-Sapelo2|BreakDancer]] || 1.4.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[breseq-Sapelo2|breseq]] || 0.34.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BS-Seeker2-Sapelo2|BS-Seeker2]] || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BS-Seeker2-Sapelo2|BS-Seeker2]] || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BUSCO-Sapelo2|BUSCO]] || 2.0, 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BUSCO-Sapelo2|BUSCO]] || 2.0, 3.0.2, 4.0.5, 4.0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BUSCO- | | [[BUSCO-Sap2test|BUSCO]] || 4.0.5, 4.0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sap2test|Sap2test]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[BUSCO-Teaching|BUSCO]] || 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[BWA-Sapelo2|BWA]] || 0.7.15, 0.7.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[BWA-Sapelo2|BWA]] || 0.7.15, 0.7.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[BWA-Teaching|BWA]] || 0.7.17, 0.7.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[BWA-Teaching|BWA]] || 0.7.17, 0.7.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| <span id ="C"></span>[[Caffe-Sapelo2|Caffe]] || 04082018 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| | | [[cactus-Sapelo2|cactus]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[cairo-Sapelo2|cairo]] || 1.14.6, 1.14.10, 1.14.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[cairo-Sapelo2|cairo]] || 1.14.6, 1.14.10, 1.14.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Canu-Sapelo2|Canu]] || 1.7, 1.7.1 | | [[Canu-Sapelo2|Canu]] || 1.7, 1.7.1, 1.8, 1.9, 2.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[canu-Teaching|Canu]] || 1.4, 1.5, 1.6, 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[CAP-miRSeq-Sapelo2|CAP-miRSeq]] || 05/20184 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CAP-miRSeq-Sapelo2|CAP-miRSeq]] || 05/20184 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[CAP3-Sapelo2|CAP3]] || 03092015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CAP3-Sapelo2|CAP3]] || 03092015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[cBar-Sapelo2|cBar]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[cDNA_Cupcake-Sapelo2|CDNA_Cupcake]] || 5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CD-HIT-Sapelo2|CD-HIT]] || 4.6.1-2012-08-27, 4.6.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[cDNA_Cupcake-Sapelo2|CDNA_Cupcake]] || 5.9, 7.2, 8.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[CDO-Sapelo2|CDO]] || 1.9.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[CellProfiler-Sapelo2|CellProfiler]] || 3.1.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Cellrange-Sapelo2|Cellrange]] || 3.0.1, 3.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[CENSOR-Sapelo2|CENSOR]] || 4.2.29 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CENSOR-Sapelo2|CENSOR]] || 4.2.29 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[CFITSIO-Sapelo2|CFITSIO]] || 3.38 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CFITSIO-Sapelo2|CFITSIO]] || 3.38 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[CFOUR-Sapelo2|CFOUR]] || 1.2, 2.00-beta, 2.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[CGAL-Sapelo2|CGAL]] || 4.11 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CGAL-Sapelo2|CGAL]] || 4.11 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Cgmaptools-Sapelo2|Cgmaptools]] || 0.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Cgmaptools-Sapelo2|Cgmaptools]] || 0.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Cgview_comparison_tool-Sapelo2|Cgview_comparison_tool]] || 2017.09.19 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[CheckM-Sapelo2|CheckM]] || 1.0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Chimera-Sapelo2|Chimera]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Chimera-Sapelo2|Chimera]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[Chimera-Teaching|Chimera]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Chromosomer-Sapelo2|Chromosomer]] || 0.1.3, 0.1.4a0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Chromosomer-Sapelo2|Chromosomer]] || 0.1.3, 0.1.4a0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Chromosomer-Teaching|Chromosomer]] || 0.1.4a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Chromosomer-Teaching|Chromosomer]] || 0.1.4a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[circlator-Sapelo2|circlator]] || 1.5.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[circlator-Sapelo2|circlator]] || 1.5.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 182: | Line 272: | ||
|- | |- | ||
| [[Cleaveland4-Sapelo2|Cleaveland4]] || 4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Cleaveland4-Sapelo2|Cleaveland4]] || 4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Click-Sapelo2|Click]] || 7.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[ClonalFrameML-Sapelo2|ClonalFrameML]] || 1.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[ClonalOrigin-Sapelo2|ClonalOrigin]] || 0.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Clust-Sapelo2|Clust]] || 1.9.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[ClustAGE-Sapelo2|ClustAGE]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Clustal-Omega-Sapelo2|Clustal-Omega]] || 1.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Clustal-Omega-Sapelo2|Clustal-Omega]] || 1.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 189: | Line 289: | ||
| [[CMake-Sapelo2|CMake]] || 3.0.0, 3.4.3, 3.5.2, 3.6.1, 3.6.2, 3.7.2, 3.8.0, 3.9.1, 3.9.5, 3.10.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CMake-Sapelo2|CMake]] || 3.0.0, 3.4.3, 3.5.2, 3.6.1, 3.6.2, 3.7.2, 3.8.0, 3.9.1, 3.9.5, 3.10.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[CNVnator-Sapelo2|CNVnator]] || 0.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CNIT-Sapelo2|CNIT]] || 2020-05-13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[CNVnator-Sapelo2|CNVnator]] || 0.3.3, 0.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Cogent-Sapelo2|Cogent]] || 3.5, 3.9, 6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Coinfinder-Sapelo2|Coinfinder]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[CONCOCT-Sapelo2|CONCOCT]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Consed-Sapelo2|Consed]] || 29.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Consed-Sapelo2|Consed]] || 29.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[cooler-Sapelo2|cooler]] || 0.8.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[CPLEX-Sapelo2|CPLEX]] || 12.6.3 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CPLEX-Sapelo2|CPLEX]] || 12.6.3 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 201: | Line 309: | ||
| [[CRISPResso-Sapelo2|CRISPResso]] || 1.0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CRISPResso-Sapelo2|CRISPResso]] || 1.0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[CUDA-Sapelo2|CUDA]] || 7.0.28, 7.5.18, 8.0.61, 8.0.61_375.26-GCC-5.4.0-2.26, 9.0.176, 9.1.85 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CUDA-Sapelo2|CUDA]] || 7.0.28, 7.5.18, 8.0.61, 8.0.61_375.26-GCC-5.4.0-2.26, 9.0.176, 9.1.85, 9.2.88, 10.0.130, 10.1.243 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[cuDNN-Sapelo2|cuDNN]] || 7.0.4, 7.2.1.38 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[cuDNN-Sapelo2|cuDNN]] || 7.0.4, 7.2.1.38, 7.4.2.24 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Cufflinks-Sapelo2|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Cufflinks-Sapelo2|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Cufflinks-Teaching|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Cufflinks-Teaching|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[cURL-Sapelo2|cURL]] || 7.49.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[cURL-Sapelo2|cURL]] || 7.49.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[cutadapt-Sapelo2|cutadapt]] || 1.9.1, 1.14, 1.16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[cutadapt-Sapelo2|cutadapt]] || 1.9.1, 1.14, 1.16, 2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Cython-Sapelo2|Cython]] || 0.27.3, 0.28.5 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Cython-Sapelo2|Cython]] || 0.27.3, 0.28.5 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 217: | Line 325: | ||
| [[CythonGSL-Sapelo2|CythonGSL]] || 0.2.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[CythonGSL-Sapelo2|CythonGSL]] || 0.2.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="D">[[Danpos2-Sapelo2|Danpos2]] || 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Cytoscape-Sapelo2|Cytoscape]] || 3.7.2, 3.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Cytoscape-Teaching|Cytoscape]] || 3.7.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| <span id ="D"></span>[[Dadi-Sapelo2|Dadi]] || 1.7.0, 2.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Danpos2-Sapelo2|Danpos2]] || 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Darknet-Sapelo2|Darknet]] || 3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Darknet-Sapelo2|Darknet]] || 3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[DAS_Tool-Sapelo2|DAS_Tool]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[datamash-Sapelo2|datamash]] || 1.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[DBG2OLC-Sapelo2|DBG2OLC]] || 20170208 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[DBG2OLC-Sapelo2|DBG2OLC]] || 20170208 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[DBG2OLC-Teaching|DBG2OLC]] || 20170208 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[DBG2OLC-Teaching|DBG2OLC]] || 20170208 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[DDocent-Sapelo2|DDocent]] || 2.7.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[DDSCAT-Sapelo2|DDSCAT]] || 7.3.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[DDSCAT-Sapelo2|DDSCAT]] || 7.3.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[deepTools-Sapelo2|deepTools]] || 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[decontaMiner-Sapelo2|decontaMiner]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[deepTools-Sapelo2|deepTools]] || 3.0.2, 3.2.1, 3.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[DeepVariant-Sapelo2|DeepVariant]] || 0.7.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[DeepVariant-Sapelo2|DeepVariant]] || 0.7.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[DendroPy-Sapelo2|DendroPy]] || 4.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Delft3d-Sapelo2|Delft3d]] || 20190610 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[delineate-Sapelo2|delineate]] || 1.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[DendroPy-Sapelo2|DendroPy]] || 4.3.0, 4.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[detectMITE-Sapelo2|detectMITE]] || 20170425 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[detonate-Sapelo2|detonate]] || 1.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[detonate-Sapelo2|detonate]] || 1.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[DIAMOND-Sapelo2|DIAMOND]] || | | [[DIAMOND-Sapelo2|DIAMOND]] || 0.8.31, 0.9.19, 0.9.22, 0.9.24, 0.9.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[DIAMOND-Teaching|DIAMOND]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[DIAMOND-Teaching|DIAMOND]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[DISCOVARdenovo-Sapelo2|DISCOVARdenovo]] || 52488 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[DIYABC-Sapelo2|DIYABC]] || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[DiscoVista-Sapelo2|DiscoVista]] || 20190429 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Distruct-Sapelo2|Distruct]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[DLCpar-Sapelo2|DLCpar]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[DLCpar-Sapelo2|DLCpar]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Domainoid-Sapelo2|Domainoid]] || 20200127 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Doxygen-Sapelo2|Doxygen]] || 1.8.7, 1.8.11, 1.8.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Doxygen-Sapelo2|Doxygen]] || 1.8.7, 1.8.11, 1.8.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[dRep-Sapelo2|dRep]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[DSSP-Sapelo2|DSSP]] || 3.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[DyNet-Sapelo2|DyNet]] || 2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[DyNet-Sapelo2|DyNet]] || 2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="E"></span>[[eggNOG-Mapper-Sapelo2|EggNOG-Mapper]] || 1.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[DyNet-Teaching|DyNet]] || 2.0.3 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| <span id ="E"></span>[[EDGE-pro-Sapelo2|EDGE-pro]] || 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[eggNOG-Mapper-Sapelo2|EggNOG-Mapper]] || 1.0.3, 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[Eigen-Sapelo2|Eigen]] || 3.2.3, 3.3.5 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[EIGENSOFT-Sapelo2|EIGENSOFT]] || 6.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[EIGENSOFT-Sapelo2|EIGENSOFT]] || 6.1.4, 7.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[EIGENSOFT-Teaching|EIGENSOFT]] || 6.1.4, 7.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[EMBOSS-Sapelo2|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[EMBOSS-Sapelo2|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[EMBOSS-Teaching|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[EMBOSS-Teaching|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[EMMAX-Sapelo2|EMMAX beta]] || beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[EMMAX-Sapelo2|EMMAX beta]] || beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Ensembl-VEP-Sapelo2|Ensembl-VEP]] || 20180914 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Ensembl-VEP-Sapelo2|Ensembl-VEP]] || 20180914 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[EnTAP-Sapelo2|EnTAP]] || 0.8.4 beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[epic2-Sapelo2|epic2]] || 0.0.36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[EricScript-Sapelo2|EricScript]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[EricScript-Sapelo2|EricScript]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 266: | Line 416: | ||
|- | |- | ||
| [[eSpeak-Sapelo2|eSpeak]] || 1.48.04 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[eSpeak-Sapelo2|eSpeak]] || 1.48.04 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ete-Sapelo2|Ete]] || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[EVcouplings-Sapelo2|EVcouplings]] || 0.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[EVcouplings-Sapelo2|EVcouplings]] || 0.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[EVidenceModeler-Sapelo2|EVidenceModeler]] || 0.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Exonerate-Sapelo2 |Exonerate]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Exonerate-Sapelo2 |Exonerate]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Exonerate-Teaching|Exonerate]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Exonerate-Teaching|Exonerate]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| <span id ="F"></span>[[FALCON-Sapelo2|FALCON]] || 02282018_unzip || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| | | [[Fast-Plast-Sapelo2|Fast-Plast]] || 1.2.6, 1.2.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[FASTA-Sapelo2|FASTA]] || 36.3.5e || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[fast-GeP-Sapelo2|fast-GeP]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[FastME-Sapelo2|FastME]] || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FastME-Sapelo2|FastME]] || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 284: | Line 440: | ||
|- | |- | ||
| [[FastQValidator-Sapelo2|FastQValidator]] || 0.1.1a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FastQValidator-Sapelo2|FastQValidator]] || 0.1.1a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[FastQ_Screen-Sapelo2|FastQ_Screen]] || 0.14.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[fastSTRUCTURE-Sapelo2|FastSTRUCTURE]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[fastSTRUCTURE-Sapelo2|FastSTRUCTURE]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 305: | Line 463: | ||
| [[FLTK-Sapelo2|FLTK]] || 1.3.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FLTK-Sapelo2|FLTK]] || 1.3.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Flye-Sapelo2|Flye]] || 2.3.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Flye-Sapelo2|Flye]] || 2.3.6, 2.6, 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[FoX-Sapelo2|FoX]] || 4.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FoX-Sapelo2|FoX]] || 4.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[freebayes-Sapelo2|Freebayes]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[freebayes-Sapelo2|Freebayes]] || 1.2.0, 1.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[freebayes-Teaching|Freebayes]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[freesasa-Sapelo2|freesasa]] || 2.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[FriBidi-Sapelo2|FriBidi]] || 1.0.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FriBidi-Sapelo2|FriBidi]] || 1.0.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Funannotate-Sapelo2|Funannotate]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[FuzzyWuzzy-Sapelo2|FuzzyWuzzy]] || 0.17.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[FuzzyWuzzy-Sapelo2|FuzzyWuzzy]] || 0.17.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 317: | Line 481: | ||
| [[fxtract-Sapelo2|fxtract]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[fxtract-Sapelo2|fxtract]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="G"></span>[[ | | <span id ="G"></span> [[G2gtools-Sapelo2|g2gtools]] || 0.2.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GAG- | | [[GAG-Sapelo2|GAG]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[GAG-Teaching|GAG]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[GAMESS-Sapelo2|GAMESS]] || 14Feb2018 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GAMESS-Sapelo2|GAMESS]] || 14Feb2018 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GapFiller-Sapelo2|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GapFiller-Sapelo2|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GapFiller-Teaching|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[GapFiller-Teaching|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[GAPIT-Sapelo2|GAPIT]] || 20180524 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[GAPPadder-Sapelo2|GAPPadder]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[GARLI-Sapelo2|GARLI]] || 2.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[GATK-Sapelo2|GATK]] || 3.4-0, 3.8-0, 3.8-1, 4.0.3.0, 4.0.11.0, 4.1.0.0, 4.1.2.0, 4.1.5.0, 4.1.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | <!-- | [[GATK-Teaching|GATK]] || 3.8-0, 3.4-0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[GAUSSIAN-Sapelo2|GAUSSIAN]] || 09, 16 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[GAUSSIAN-Teaching|GAUSSIAN]] || 16 || [[:Category:Chemistry|Chemistry]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[GaussView-Sapelo2|GaussView]] || 5, 6.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[GaussView-Teaching|GaussView]] || 6.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GBlocks-Sapelo2|GBlocks]] || 0.91b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GBlocks-Sapelo2|GBlocks]] || 0.91b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GCTA-Sapelo2 |GCTA]] || 1.26.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GCTA-Sapelo2 |GCTA]] || 1.26.0, 1.93.0-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GD-Sapelo2|GD]] || 2.66 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GD-Sapelo2|GD]] || 2.66 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 346: | Line 522: | ||
|- | |- | ||
| [[Gdk-pixbuf-Sapelo2|Gdk-pixbuf]] || 2.36.0 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Gdk-pixbuf-Sapelo2|Gdk-pixbuf]] || 2.36.0 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[GEAN-Sapelo2|GEAN]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[GEM-Sapelo2|GEM]] || 1.0, 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[GEM-library-Sapelo2 |GEM-library]] || 20130406-045632 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GEM-library-Sapelo2 |GEM-library]] || 20130406-045632 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 351: | Line 531: | ||
| [[GeneMark.hmm.eukaryotic-Sapelo2|GeneMark.hmm.eukaryotic]] || 4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GeneMark.hmm.eukaryotic-Sapelo2|GeneMark.hmm.eukaryotic]] || 4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GeneMarkES-Sapelo2|GeneMarkES]] || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2 | | [[GeneMarkES-Sapelo2|GeneMarkES]] || 4.33, 4.57 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!--| [[GeneMarkES-Teaching|GeneMarkES]] || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[GeneMarkS-T-Sapelo2|GeneMarkS-T]] || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GeneMarkS-T-Sapelo2|GeneMarkS-T]] || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GeneMarkS-Sapelo2|GeneMarkS]] || 4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GeneMarkS-Sapelo2|GeneMarkS]] || 4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[GenericRepeatFinder-Sapelo2|GenericRepeatFinder]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[GenMap-Sapelo2|GenMap]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Genocore-Sapelo2|Genocore]] || 2020-05-13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Genome-Sapelo2|Genome]] || Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Genome-Sapelo2|Genome]] || Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GenomeTools-Sapelo2|GenomeTools]] || 1.5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GenomeTools-Sapelo2|GenomeTools]] || 1.5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Genrich-Sapelo2|Genrich]] || 0.5, 0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[GEOS-Sapelo2|GEOS]] || 3.6.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GEOS-Sapelo2|GEOS]] || 3.6.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GET_HOMOLOGUES-Teaching|GET_HOMOLOGUES]] || 1.7.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | | [[GET_HOMOLOGUES-Sapelo2|GET_HOMOLOGUES]] || 1.7.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[GET_HOMOLOGUES-Teaching|GET_HOMOLOGUES]] || 1.7.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[GET_PHYLOMARKERS-Sapelo2|GET_PHYLOMARKERS]] || 1.2.11, 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[gfaviz-Sapelo2|gfaviz]] || 1.0.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Gffcompare-Sapelo2|Gffcompare]] || 0.10.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Gffcompare-Sapelo2|Gffcompare]] || 0.10.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 374: | Line 568: | ||
|- | |- | ||
| [[Ghostscript-Sapelo2|Ghostscript]] || 9.20, 9.22 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Ghostscript-Sapelo2|Ghostscript]] || 9.20, 9.22 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[GISTIC-Sapelo2|GISTIC]] || 2.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[gkin-Sapelo2|Gkin]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[GL2PS-Sapelo2|GL2PS]] || 1.4.0 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GL2PS-Sapelo2|GL2PS]] || 1.4.0 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 381: | Line 579: | ||
| [[GLIMMER-Sapelo2|GLIMMER]] || 3.02b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GLIMMER-Sapelo2|GLIMMER]] || 3.02b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GLIMMER-Teaching|GLIMMER]] || 3.02b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[GLIMMER-Teaching|GLIMMER]] || 3.02b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[GLPK-Sapelo2|GLPK]] || 4.63, 4.65 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GLPK-Sapelo2|GLPK]] || 4.63, 4.65 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 389: | Line 587: | ||
| [[GMP-Sapelo2|GMP]] || 4.3.2, 6.1.1, 6.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GMP-Sapelo2|GMP]] || 4.3.2, 6.1.1, 6.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[gnuplot-Sapelo2|gnuplot]] || 5.0.5 || [[:Category: | | [[gnuplot-Sapelo2|gnuplot]] || 5.0.5 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GObject-Introspection-Sapelo2|GObject-Introspection]] || 1.49.1, 1.54.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GObject-Introspection-Sapelo2|GObject-Introspection]] || 1.49.1, 1.54.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 400: | Line 598: | ||
|- | |- | ||
| [[Graphviz-Sapelo2|Graphviz]] || 2.40.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Graphviz-Sapelo2|Graphviz]] || 2.40.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[GROCSVs-Sapelo2|GROCSVs]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Gromacs-Sapelo2 |Gromacs]] || 2016.4, 2018.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Gromacs-Sapelo2 |Gromacs]] || 2016.4, 2018.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GSL-Sapelo2|GSL]] || 1.16, 2.1, 2.3. 2.4 || [[:Category:Math Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GSL-Sapelo2|GSL]] || 1.16, 2.1, 2.3. 2.4, 2.5 || [[:Category:Math Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[GStreamer-Sapelo2|GStreamer]] || 1.14.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GStreamer-Sapelo2|GStreamer]] || 1.14.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[GTDBTk-Sapelo2|GTDBTk]] || 0.2.2, 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[gtftogenepred-Sapelo2|gtftogenepred]] || 377-3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[GTK+-Sapelo2|GTK+]] || 2.24.31 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[GTK+-Sapelo2|GTK+]] || 2.24.31 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 413: | Line 617: | ||
| [[Guile-Sapelo2|Guile]] || 1.8.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Guile-Sapelo2|Guile]] || 1.8.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="H">[[h5py-Sapelo2|h5py]] || 2.7.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="H"></span>[[h5py-Sapelo2|h5py]] || 2.7.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[HapCUT-Sapelo2|HapCUT]] || 0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[HapCUT2-Sapelo2|HapCUT2]] || 20190606 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[HarfBuzz-Sapelo2|HarfBuzz]] || 1.3.1, 1.7.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HarfBuzz-Sapelo2|HarfBuzz]] || 1.3.1, 1.7.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 419: | Line 627: | ||
| [[HARP-Sapelo2|HARP]] || 140925_103521 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HARP-Sapelo2|HARP]] || 140925_103521 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Harvest-Teaching|Harvest]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Harvest-Teaching|Harvest]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[HarvestTools-Sapelo2|HarvestTools]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HarvestTools-Sapelo2|HarvestTools]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 426: | Line 634: | ||
|- | |- | ||
| [[HiC-Pro-Sapelo2|HiC-Pro]] || 2.11.0-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HiC-Pro-Sapelo2|HiC-Pro]] || 2.11.0-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Hinge-Sapelo2|Hinge]] || 0.5.0-4-deb_cv1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[hindex-Sapelo2|hindex]] || 1.42 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[hindex-Sapelo2|hindex]] || 1.42 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 432: | Line 642: | ||
|- | |- | ||
| [[HISAT2-Teaching|HISAT2]] || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | | [[HISAT2-Teaching|HISAT2]] || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[HMMER-Sapelo2|HMMER]] || 2.3, 3.1b2, 3.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Homer-Sapelo2|Homer]] || 4.9.1, 4.10, 4.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
| [[Homer-Sapelo2|Homer]] || 4.9.1, 4.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
<!-- | [[Homer-Teaching|Homer]] || 4.9.1, 4.10, 4.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[HPCGridRunner-Sapelo2|HPCGridRunner]] || 1.0.2 || [[:Category:Tools|Tools]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HPCGridRunner-Sapelo2|HPCGridRunner]] || 1.0.2 || [[:Category:Tools|Tools]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 443: | Line 655: | ||
| [[HTSeq-Sapelo2|HTSeq]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HTSeq-Sapelo2|HTSeq]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[HTSeq-Teaching|HTSeq]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[HTSeq-Teaching|HTSeq]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[HTSlib-Sapelo2|HTSlib]] || 1.3.2, 1.6, 1.8 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[HTStream-Sapelo2|HTStream]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[HUMAnN2-Sapelo2|HUMAnN2]] || 0.11.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[HybPiper-Sapelo2|HybPiper]] || 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[HybPiper-Sapelo2|HybPiper]] || 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[HyPhy-Sapelo2|HyPhy]] || 2.5.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Hypre-Sapelo2|Hypre]] || 2.11.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Hypre-Sapelo2|Hypre]] || 2.11.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="I">[[ | | <span id ="I"></span>[[ICORN2-Sapelo2|ICORN2]] || 0.95 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[IDBA-UD-Sapelo2|IDBA-UD]] || 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[IDR-Sapelo2|IDR]] || 2.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[IgBlast-Sapelo2 | IgBlast]] || 1.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[IGV-Sapelo2 |IGV]] || 2.4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[IGV-Teaching |IGV]] || 2.4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[IGVTools-Sapelo2 |IGVTools]] || 2.3.98 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[IGVTools-Sapelo2 |IGVTools]] || 2.3.98 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ImageMagick-Sapelo2|ImageMagick]] || 7.0.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[illumiprocessor-Sapelo2 |illumiprocessor]] || 2.0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ImageMagick-Sapelo2|ImageMagick]] || 7.0.5, 7.0.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Infernal-Sapelo2|Infernal]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Infernal-Sapelo2|Infernal]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[iprscan-Sapelo2|iprscan (InterProScan)]] || 5.29-68.0, 5.31-70.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[IonCom-Sapelo2|IonCom]] || 20190521 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[iprscan-Sapelo2|iprscan (InterProScan)]] || 5.29-68.0, 5.31-70.0, 5.32-71.0, 5.41-78.0, 5.44-90.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ipyrad-Sapelo2|ipyrad]] || 0.7.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ipyrad-Sapelo2|ipyrad]] || 0.7.24, 0.7.28, 0.7.30, 0.9.19 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ipyrad-Teaching|Ipyrad]] || 0.7.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[ipyrad-Teaching|Ipyrad]] || 0.7.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[IPython-Sapelo2|IPython]] || 5.3.0, 6.2.1, 7.5.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[IQ-Tree-Sapelo2|IQ-Tree]] || 1.5.5, 1.6.5, 1.6.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[IQ-Tree- | | [[IQ-Tree-Teaching|IQ-Tree]] || 1.6.12|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[IRMA-Sapelo2|IRMA]] || 0.6.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[IRMA-Sapelo2|IRMA]] || 0.6.7, 0.9.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ISGPipeline-Sapelo2|ISGPipeline]] || 0.16.10-3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[IsONclust-Sapelo2 |IsONclust]] || 0.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[IsoSeq3-Sapelo2|IsoSeq3]] || 3.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ITSTool-Sapelo2|ITSTool]] || 2.0.4 || [[:Category:Utility|Utility]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ITSTool-Sapelo2|ITSTool]] || 2.0.4 || [[:Category:Utility|Utility]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="J">[[JAGS-Sapelo2|JAGS]] || 4.3.0 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="J"></span>[[JAGS-Sapelo2|JAGS]] || 4.3.0 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[JasPer-Sapelo2|JasPer]] || 1.900.1, 2.0.12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[JasPer-Sapelo2|JasPer]] || 1.900.1, 2.0.12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Java-Sapelo2|Java]] || 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Java-Sapelo2|Java]] || 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144, 1.8.0_202 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Java-Teaching|Java]] || 1.8. | | [[Java-Teaching|Java]] || 1.8.0_144, 1.8.0_241, 11.0.2 || [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[jcvi-Sapelo2|jcvi]] || 0.8.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Jellyfish-Sapelo2|Jellyfish]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Jellyfish-Sapelo2|Jellyfish]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 486: | Line 728: | ||
|- | |- | ||
| [[Juicer-Sapelo2|Juicer]] || 1.5.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Juicer-Sapelo2|Juicer]] || 1.5.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Julia-Sapelo2|Julia]] || 1.3.1|| [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[JUnit-Sapelo2|JUnit]] || 4.12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[JUnit-Sapelo2|JUnit]] || 4.12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[Jupyter-Sapelo2|Jupyter]] || 4.3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | <span id ="K"></span>[[Kaiju-Sapelo2|Kaiju]] || 1.6.2, 1.7.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[kallisto-Sapelo2|kallisto]] || 0.43.1, 0.46.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[kallisto-Teaching|kallisto]] || 0.43.1, 0.46.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[KAT-Sapelo2|KAT]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[KAT-Sapelo2|KAT]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Kent_tools-Sapelo2|Kent_tools]] || 20190208, 20200512 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[keras-Sapelo2|keras]] || 2.0.6, 2.2.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[keras-Sapelo2|keras]] || 2.0.6, 2.2.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[KinFin-Sapelo2|KinFin]] || 1.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[KmerGenie-Sapelo2|KmerGenie]] || 1.7044 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[KmerGenie-Sapelo2|KmerGenie]] || 1.7044 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[KmerGenie-Teaching|KmerGenie]] || 1.7044 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[KmerGenie-Teaching|KmerGenie]] || 1.7044 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Kraken2-Sapelo2|Kraken2]] || 2.0.7-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[KronaTools-Sapelo2|KronaTools]] || 2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[KronaTools-Sapelo2|KronaTools]] || 2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="L"></span>[[LAME-Sapelo2|LAME]] || 3.100 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="L"></span><!-- [[LADR-Teaching|LADR]] || 2009-11A || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| --> [[LAME-Sapelo2|LAME]] || 3.100 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[LAMMPS-Sapelo2|LAMMPS]] || 30Jul16, 11Aug17 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[LAPACK-Sapelo2|LAPACK]] || 3.6.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LAPACK-Sapelo2|LAPACK]] || 3.6.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[LAST-Sapelo2|LAST]] || 956 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LAST-Sapelo2|LAST]] || 956, 959, 1047 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[LASTZ-Sapelo2|LASTZ]] || 1.04.00 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LASTZ-Sapelo2|LASTZ]] || 1.04.00 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 514: | Line 772: | ||
|- | |- | ||
| [[LDhelmet-Sapelo2|LDhelmet]] || 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LDhelmet-Sapelo2|LDhelmet]] || 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Leafcutter-Sapelo2|Leafcutter]] || 0.2.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Lep-MAP3-Sapelo2|Lep-MAP3]] || 0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[libssh2-Sapelo2|libssh2]] || 1.9.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[LibStatGen-Sapelo2|LibStatGen]] || 1.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LibStatGen-Sapelo2|LibStatGen]] || 1.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[LibTIFF-Sapelo2|LibTIFF]] || 4.0.6, 4.0.8, 4.0.9 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LibTIFF-Sapelo2|LibTIFF]] || 4.0.6, 4.0.8, 4.0.9 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[LINKS-Sapelo2|LINKS]] || 1.8.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[LittleCMS-Sapelo2|LittleCMS]] || 2.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LittleCMS-Sapelo2|LittleCMS]] || 2.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 530: | Line 796: | ||
|- | |- | ||
| [[LongRanger-Sapelo2|LongRanger]] || 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LongRanger-Sapelo2|LongRanger]] || 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[LoRDEC-Sapelo2|LoRDEC]] || 0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[LoRMA-Sapelo2|LoRMA]] || 0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[LRCstats-Sapelo2|LRCstats]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[lrslib-Sapelo2|lrslib]] || 6.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[lrslib-Sapelo2|lrslib]] || 6.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 536: | Line 808: | ||
|- | |- | ||
| [[LS-PrePost-Sapelo2|LS-PrePost]] || 4.5 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LS-PrePost-Sapelo2|LS-PrePost]] || 4.5 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[LtrDetector-Sapelo2|LtrDetector]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[LTR_Finder-Sapelo2|LTR_Finder]] || 1.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[LTR_retriever-Sapelo2|LTR_retriever]] || 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[LTR_retriever-Sapelo2|LTR_retriever]] || 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 545: | Line 821: | ||
| <span id ="M"></span>[[M4-Sapelo2|M4]] || 1.4.16, 1.4.17, 1.4.17 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="M"></span>[[M4-Sapelo2|M4]] || 1.4.16, 1.4.17, 1.4.17 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Macs2-Sapelo2|MACS2]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MacSyFinder-Sapelo2|MacSyFinder]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Macs2-Sapelo2|MACS2]] || 2.1.1, 2.1.2, 2.2.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MAFFT-Sapelo2|MAFFT]] || 7.273, 7.313, 7.397 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MAFFT-Sapelo2|MAFFT]] || 7.273, 7.313, 7.397, 7.407, 7.453, 7.470 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MAFFT-Teaching|MAFFT]] || 7.130, 7.273, 7.313 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[MAFFT-Teaching|MAFFT]] || 7.130, 7.273, 7.313 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Magic-BLAST-Sapelo2|Magic-BLAST]] || 1.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Magma-GPU-Sapelo2|Magma-GPU]] || 2.3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Magma-GPU-Sapelo2|Magma-GPU]] || 2.3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Magma-Sapelo2|Magma]] || 2.22-9 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Magma-Sapelo2|Magma]] || 2.22-9, 2.24-4, 2.25 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[mahotas-Sapelo2|mahotas]] || 1.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[mahotas-Sapelo2|mahotas]] || 1.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[MAJIQ-Sapelo2|MAJIQ]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Maker- | | [[Maker-Sapelo2|Maker]] || 3.01.02-beta,2.31.9, 2.31.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Maker-Sap2test|Maker]] || 3.01.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sap2test|Sap2test]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[Maker-Teaching|Maker]] || 2.31.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Mako-Sapelo2|Mako]] || 1.0.4, 1.0.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Mako-Sapelo2|Mako]] || 1.0.4, 1.0.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[MAnorm-Sapelo2|MAnorm]] || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MARVEL-Sapelo2|MARVEL]] || 20180918 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MARVEL-Sapelo2|MARVEL]] || 20180918 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 567: | Line 853: | ||
| [[Mash-Sapelo2|Mash]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Mash-Sapelo2|Mash]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[MashMap-Sapelo2|MashMap]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MatLab-Sapelo2|Matlab]] || R2017b || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MaSIF-Sapelo2|MaSIF]] || 20200722 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[MaSuRCA-Sapelo2|MaSuRCA]] || 3.2.2, 3.2.9, 3.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Mathematica-Sapelo2|Mathematica]] || 12.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MatLab-Sapelo2|Matlab]] || R2017b, R2018b, R2019b || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[MatLab-Teaching|Matlab]] || R2018b || [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Matplotlib-Sapelo2|Matplotlib]] || 1.5.3, 2.0.2, 2.1.0, 2.1.2, 2.2.3, 3.0.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Mauve-Sapelo2|Mauve]] || 2015-02-13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Mauve-Sapelo2|Mauve]] || 2015-02-13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Maven-Sapelo2|Maven]] || 3.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Maven-Sapelo2|Maven]] || 3.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Mawk-Sapelo2|Mawk]] || 1.3.4|| [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MaxBin-Sapelo2|MaxBin]] || 2.2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MCL-Sapelo2|MCL]] || 14.137 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MCL-Sapelo2|MCL]] || 14.137 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MCScanX-Sapelo2 |MCScanX]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MCScanX-Sapelo2 |MCScanX]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Medaka-Sapelo2 |Medaka]] || 0.9.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Medusa-Sapelo2 |Medusa]] || 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MEGA-Sapelo2 |MEGA]] || 7.0.26-1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MEGA-Sapelo2 |MEGA]] || 7.0.26-1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MEGAHIT-Sapelo2 |MEGAHIT]] || 1.1.1, 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MEGAHIT-Sapelo2 |MEGAHIT]] || 1.1.1, 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Megalodon-Sapelo2|Megalodon]] || 0.1.0, 1.0.0, 2.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[Megam-Teaching|Megam]] || 0.92 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[MeGAMerge-Sapelo2|MeGAMerge]] || 3.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MEME-Sapelo2|MEME]] || 4.11.0, 5.0.0_1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MEME-Sapelo2|MEME]] || 4.11.0, 5.0.0_1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 593: | Line 903: | ||
| [[MET-Sapelo2 |MET]] || 7.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MET-Sapelo2 |MET]] || 7.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[methylpy-Sapelo2|methylpy]] || 1.2.9, 1.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MetaBAT-Sapelo2|MetaBAT]] || 2.12.1, 2.15-4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[METABOLIC-Sapelo2|METABOLIC]] || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MetaCLADE-Sapelo2|MetaCLADE]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MetaPhlAn-Sapelo2|MetaPhlAn]] || 1.7.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MetaPhlAn2-Sapelo2|MetaPhlAn2]] || 2.7.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[methylpy-Sapelo2|methylpy]] || 1.2.9, 1.3.2, 1.4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[METIS-Sapelo2|METIS]] || 5.1.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[METIS-Sapelo2|METIS]] || 5.1.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[MG-RAST-Tools-Sapelo2 |MG-RAST-Tools]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[minced-Sapelo2|minced]] || 0.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[minced-Sapelo2|minced]] || 0.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Minia-Sapelo2|Minia]] || 3.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[miniasm-Sapelo2|miniasm]] || 0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[miniasm-Teaching|miniasm]] || 0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Miniconda3-Sapelo2|Miniconda3]] || 4.4.10 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Miniconda3-Sapelo2|Miniconda3]] || 4.4.10 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[minimap2-Sapelo2|minimap2]] || 2.10, 2.13, 2.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[minimap2-Teaching|minimap2]] || 2.10, 2.13, 2.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[MinPath-Sapelo2|MinPath]] || 1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MIonSite-Sapelo2|MIonSite]] || 20190528 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Mip-Sapelo2|mip]] || 1.7.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Mirdeep-p-Sapelo2|mirdeep-p]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Mirdeep-p-Sapelo2|mirdeep-p]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MiRDeep2-Sapelo2|miRDeep2]] || 0.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MiRDeep2-Sapelo2|miRDeep2]] || 0.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[miRDP2-Sapelo2|MiRDP2]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MISO-Sapelo2|MISO]] || 0.5.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MITE-Hunter-Sapelo2|MITE-Hunter]] || 11-2011 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MITE-Hunter-Sapelo2|MITE-Hunter]] || 11-2011 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MITE-Tracker-Sapelo2|MITE-Tracker]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MITObim-Sapelo2|MITObim]] || 1.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[MitoZ-Sapelo2|MitoZ]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[mmquant-Sapelo2|mmquant]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Montreal Forced Aligner-Sapelo2|Montreal Forced Aligner]] || 1.0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[MOTECC_qmdcp-Teaching|MOTECC_qmdcp]] || 90 || [[:Category:Chemistry|Chemistry]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Mothur-Sapelo2|Mothur]] || 1.39.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Mothur-Sapelo2|Mothur]] || 1.39.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 618: | Line 970: | ||
|- | |- | ||
| [[MREPS-Sapelo2|MREPS]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MREPS-Sapelo2|MREPS]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[ms-Teaching|ms]] || 20140304 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[MSG-Sapelo2|MSG]] || 0.4.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[MSG-Teaching|MSG]] || 0.4.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[MSTmap-Sapelo2|MSTmap]] || 20181130 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[MultiQC-Sapelo2|MultiQC]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MultiQC-Sapelo2|MultiQC]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 623: | Line 983: | ||
| [[MUMmer-Sapelo2|MUMmer]] || 3.23, 4.0.0beta2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MUMmer-Sapelo2|MUMmer]] || 3.23, 4.0.0beta2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MUMmer-Teaching|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[MUMmer-Teaching|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[MUSCLE-Sapelo2|MUSCLE]] || 3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MUSCLE-Sapelo2|MUSCLE]] || 3.8.1551, 3.8.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[MuTect-Sapelo2|MuTect]] || 1.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[MuTect-Sapelo2|MuTect]] || 1.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[MuTect-Teaching|MuTect]] || 1.1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[muver-Sapelo2|muver]] || 0.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[muver-Sapelo2|muver]] || 0.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="N">[[NAMD-Sapelo2|NAMD]] || 2. | | [[mvqtlcim-Sapelo2|mvqtlcim]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[MZmine2-Sapelo2|MZmine2]] || 2.40.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| <span id ="N"></span> [[NAL_RNA_seq_annotation-Sapelo2|NAL_RNA_seq_annotation]] ||20200728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NAMD-Sapelo2|NAMD]] || 2.13 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Nanocorr-Sapelo2|Nanocorr]] || 5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Nanocorr-Sapelo2|Nanocorr]] || 5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[NanoFilt-Sapelo2|NanoFilt]] || 2.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NanoPlot-Sapelo2|NanoPlot]] || 1.26.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Nanopolish-Sapelo2|Nanopolish]] || 0.10.2, 0.11.1, 0.12.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[NASM-Sapelo2|NASM]] || 2.11, 2.12, 2.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[NASM-Sapelo2|NASM]] || 2.11, 2.12, 2.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[NCL-Sapelo2|NCL]] || | | [[NBO-Sapelo2|NBO]] || 7.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[NCCL-Sapelo2|NCCL]] || 2.4.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NCL-Sapelo2|NCL]] || 6.4.0, 6.5.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[NCL-Teaching|NCL]] || 6.4.0, 6.5.0 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[ncview-Sapelo2|ncview]] || 2.1.7 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NCO-Sapelo2|NCO]] || 4.7.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[NCO-Teaching|NCO]] || 4.7.4 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Necklace-Sapelo2|Necklace]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[NeEstimator-Sapelo2|NeEstimator]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[NeEstimator-Sapelo2|NeEstimator]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Neptune-Sapelo2|Neptune]] || 1.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NetSurfP-Sapelo2|NetSurfP]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Newbler-Sapelo2|Newbler]] || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Newbler-Sapelo2|Newbler]] || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Nextflow-Sapelo2|Nextflow]] || 18.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[NextGenMap-Sapelo2|NextGenMap]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[NextGenMap-Sapelo2|NextGenMap]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ngmlr-Sapelo2|ngmlr]] || 0.2.6-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ngmlr-Sapelo2|ngmlr]] || 0.2.6-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[NGmerge-Sapelo2|NGmerge]] || 0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[NGS-Sapelo2|NGS]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[NGS-Sapelo2|NGS]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[NGSEPcore-Sapelo2|NGSEPcore]] || 3.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[ngsplot-Sapelo2|ngsplot]] || 2.6.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[NGSQCToolkit-Sapelo2|NGSQCToolkit]] || 2.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[nhPhyML-Sapelo2|nhPhyML]] || 20180515 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[nhPhyML-Sapelo2|nhPhyML]] || 20180515 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 660: | Line 1,062: | ||
|- | |- | ||
| [[NucleoATAC-Sapelo2|NucleoATAC]] || 0.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[NucleoATAC-Sapelo2|NucleoATAC]] || 0.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[NWChem-Sapelo2|NWChem]] || 6.8 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| <span id ="O"></span>[[Oases-Sapelo2|Oases]] || 0.2.08, 0.2.09 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="O"></span>[[Oases-Sapelo2|Oases]] || 0.2.08, 0.2.09 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[OCaml-Sapelo2|OCaml]] || 4.01.0, 4.02.3 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OCaml-Sapelo2|OCaml]] || 4.01.0, 4.02.3 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Ont-Guppy-Sapelo2|Ont-Guppy]] || 3.2.4, 4.0.11, 4.0.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[OpenBUGS-Sapelo2|OpenBUGS]] || 3.2.3 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OpenBUGS-Sapelo2|OpenBUGS]] || 3.2.3 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[OpenCV-Sapelo2|OpenCV]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OpenCV-Sapelo2|OpenCV]] || 3.4.1, 3.4.7 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[OpenJPEG-Sapelo2|OpenJPEG]] || 2.3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OpenJPEG-Sapelo2|OpenJPEG]] || 2.3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 673: | Line 1,079: | ||
| [[OpenSlide-Sapelo2|OpenSlide]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OpenSlide-Sapelo2|OpenSlide]] || 3.4.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ORCA-Sapelo2 |ORCA]] || 3.0.3, 4.0.0.2, 4.0.1.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OpenSlide-Python-Sapelo2|OpenSlide-Python]] || 1.1.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ORCA-Sapelo2 |ORCA]] || 3.0.3, 4.0.0.2, 4.0.1.2, 4.1.0, 4.1.1, 4.2.1 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[OrfM-Sapelo2|OrfM]] || 0.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OrfM-Sapelo2|OrfM]] || 0.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[OrganelleRef_PBA-Sapelo2|OrganelleRef_PBA]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ORGanelle_ASeMbler-Sapelo2|ORGanelle_ASeMbler]] || 0.2.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ORGanelle_ASeMbler-Sapelo2|ORGanelle_ASeMbler]] || 0.2.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 681: | Line 1,091: | ||
| [[ORGanelle_ASeMbler-Sapelo2|ORGASM]] || 0.2.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ORGanelle_ASeMbler-Sapelo2|ORGASM]] || 0.2.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ORP-Sapelo2|ORP]] || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ORP-Sapelo2|ORP]] || 2.0.0, 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[OrthoFinder-Sapelo2|OrthoFinder]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[OrthoFinder-Sapelo2|OrthoFinder]] || 2.1.2, 2.2.7, 2.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[OrthoFinder-Teaching|OrthoFinder]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[OrthoFinder-Teaching|OrthoFinder]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[OrthoMCL-Sapelo2|OrthoMCL]] || 2.0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| <span id ="P"></span>[[PAGIT-Sapelo2|PAGIT]] || 1.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="P"></span>[[p7zip-Sapelo2|p7zip]] || 16.02 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PAGIT-Sapelo2|PAGIT]] || 1.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Pairix-Sapelo2|Pairix]] || 0.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[pairtools-Sapelo2|pairtools]] || 0.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Pal_finder-Sapelo2|Pal_finder]] || 0.02.04 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PAML-Sapelo2|PAML]] || 4.9h || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PAML-Sapelo2|PAML]] || 4.9h || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PAML-Teaching|PAML]] || 4. | | [[PAML-Teaching|PAML]] || 4.9i || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PANDAseq-Sapelo2 |PANDAseq]] || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[Pangloss-Sapelo2 |Pangloss]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Pango-Sapelo2 |Pango]] || 1.40.3, 1.41.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Pango-Sapelo2 |Pango]] || 1.40.3, 1.41.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Parliament2-Sapelo2|Parliament2]] || 0.1.8, hgsc || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Panoply-Sapelo2|Panoply]] || 4.11.6 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Parliament2-Sapelo2|Parliament2]] || 0.1.8, 0.1.11, hgsc || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Parsnp-Sapelo2|Parsnp]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Parsnp-Sapelo2|Parsnp]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PartitionFinder-Sapelo2|PartitionFinder]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PartitionFinder-Sapelo2|PartitionFinder]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[PartitionFinder-Teaching|PartitionFinder]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[PanOCT-Sapelo2|PanOCT]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PASA-Sapelo2|PASA]] || 2.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PASA-Sapelo2|PASA]] || 2.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 707: | Line 1,135: | ||
| [[PASTA-Sapelo2|PASTA]] || 1.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PASTA-Sapelo2|PASTA]] || 1.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PAUP-Sapelo2|PAUP]] || | <!-- | [[PASTA-Teaching|PASTA]] || 1.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[PAUP-Sapelo2|PAUP]] || 4a165_centos64, 4a166_centos64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[pb-assembly-Sapelo2|Pb-assembly]] || 0.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pb-assembly-Sapelo2|Pb-assembly]] || 0.0.2, 0.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[pbh5tools-Sapelo2 |pbh5tools]] || 0.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pbh5tools-Sapelo2 |pbh5tools]] || 0.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PBLAT-Sapelo2|PBLAT]] || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PBLAT-Sapelo2|PBLAT]] || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[pbmm2-Sapelo2|pbmm2]] || 1.0.0, 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[pcawg-dkfz-workflow-Sapelo2|pcawg-dkfz-workflow]] || 2.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PBSuite-Sapelo2 |PBSuite]] || 15.8.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PBSuite-Sapelo2 |PBSuite]] || 15.8.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PCRE-Sapelo2 |PCRE]] || 8.38, 8.39, 8.41 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PCRE-Sapelo2 |PCRE]] || 8.38, 8.39, 8.41 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PeakRanger-Sapelo2|PeakRanger]] || 1.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PEAR-Sapelo2|PEAR]] || 0.9.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PEAR-Sapelo2|PEAR]] || 0.9.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 723: | Line 1,159: | ||
| [[Perl-Sapelo2|Perl]] || 5.20.3, 5.24.0, 5.24.1, 5.26.0, 5.26.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Perl-Sapelo2|Perl]] || 5.20.3, 5.24.0, 5.24.1, 5.26.0, 5.26.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Perl-Teaching|Perl]] || 5. | | [[Perl-Teaching|Perl]] || 5.30.0 || [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PETSc-Sapelo2|PETSc]] || 3.8.4 || [[:Category:Math Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PETSc-Sapelo2|PETSc]] || 3.8.4 || [[:Category:Math Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PGDBG-Sapelo2|PGDBG]] || 18.10 || [[:Category:Debugger|Debugger]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PGDSpider-Sapelo2|PGDSpider]] || 2.1.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PGDSpider-Sapelo2|PGDSpider]] || 2.1.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PhaseGenomics-Sapelo2|PhaseGenomics]] || 20181220 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[phaser-Sapelo2 |phaser]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[phaser-Sapelo2 |phaser]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PhaseTank-Sapelo2|PhaseTank]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PhaseTank-Sapelo2|PhaseTank]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PHASIS-Sapelo2 |PHASIS]] || 3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[PHENIX-Sapelo2|PHENIX]] || 1.18.2-3874 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Phobius-Sapelo2|Phobius]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Phobius-Sapelo2|Phobius]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 744: | Line 1,188: | ||
|- | |- | ||
| [[PhyloCSF-Sapelo2 |PhyloCSF]] || 20180919 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PhyloCSF-Sapelo2 |PhyloCSF]] || 20180919 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PhyloSift-Sapelo2 |PhyloSift]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[PhyloSkeleton-Sapelo2 |PhyloSkeleton]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[phyluce-Sapelo2|Phyluce]] || 1.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[phyluce-Sapelo2|Phyluce]] || 1.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 749: | Line 1,197: | ||
| [[PhyML-Sapelo2|PhyML]] || 3.3.20170530 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PhyML-Sapelo2|PhyML]] || 3.3.20170530 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[PhyParts-Sapelo2|PhyParts]] || 0.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[picard- | | [[picard-Sapelo2 |picard]] || 2.16.0, 2.21.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PICRUSt-Sapelo2 |PICRUSt]] || 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[picard-Teaching|Picard]] || 2.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[PICRUSt-Sapelo2 |PICRUSt]] || 1.1.3, 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[pigz-Sapelo2|pigz]] || 2.3.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pigz-Sapelo2|pigz]] || 2.3.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 763: | Line 1,213: | ||
| [[Pilon-Sapelo2|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Pilon-Sapelo2|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[pilon-Teaching|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[pilon-Teaching|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[PlantCV-Sapelo2|PlantCV]] || 3.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Platypus-Sapelo2|Platypus]] || 0.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PLINK-Sapelo2|PLINK]] || 1.07, 1.9b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PLEK-Sapelo2|PLEK]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PLINK-Sapelo2|PLINK]] || 1.07, 1.9b, 2.0-alpha1, 2.0-alpha2, 2.0-alpha2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[plmc-Sapelo2|Plmc]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[plmc-Sapelo2|Plmc]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Porechop-Sapelo2|Porechop]] || 0.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PoSSuMsearch-Sapelo2|PoSSuMsearch]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PoSSuMsearch-Sapelo2|PoSSuMsearch]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[pplacer-Sapelo2|Pplacer]] || 1.1.alpha19 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Praat-Sapelo2|Praat]] || 6048-Linux64-nogui || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PRANK-Sapelo2|PRANK]] || 170427 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PRANK-Sapelo2|PRANK]] || 170427 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PRAPI-Sapelo2|PRAPI]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Primer3-Sapelo2|Primer3]] || 2.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Primer3-Sapelo2|Primer3]] || 2.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PRINSEQ-Sapelo2|PRINSEQ]] || 0.20.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PRINSEQ-Sapelo2|PRINSEQ]] || 0.20.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ProbABEL-Sapelo2|ProbABEL]] || 0.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[prodigal-Sapelo2|Prodigal]] || 2.6.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[prodigal-Sapelo2|Prodigal]] || 2.6.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[progressiveCactus-Sapelo2|progressiveCactus]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[ProphET-Sapelo2 |ProphET]] || 20200323 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PROJ-Sapelo2|PROJ]] || 4.9.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PROJ-Sapelo2|PROJ]] || 4.9.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Prokka-Sapelo2|Prokka]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Prokka-Sapelo2|Prokka]] || 1.13, 1.14.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[Prokka-Teaching|Prokka]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[proovread-Sapelo2|proovread]] || 2.14.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | <!-- | [[proovread-Teaching|Proovread]] || 2.14.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[protobuf-Sapelo2|protobuf]] || 3.3.0, 3.4.0, 3.6.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | <!-- | [[LADR-Teaching|prover9]] || 2009-11A || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[PSI4-Sapelo2|PSI4]] || 1.3.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[psmc-Sapelo2|psmc]] || 0.6.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[pVACtools-Sapelo2|pVACtools]] || 1.5.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[pyani-Sapelo2|pyani]] || 0.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[pybedtools-Sapelo2|pybedtools]] || 0.7.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pybedtools-Sapelo2|pybedtools]] || 0.7.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[PyCUDA-Sapelo2|PyCUDA]] || 2019.1.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[pyDNA-Sapelo2|pyDNA]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pyDNA-Sapelo2|pyDNA]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[pydub-Sapelo2|pydub]] || 0.22.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[pydub-Sapelo2|pydub]] || 0.22.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[pyfasta-Sapelo2|pyfasta]] || 0.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[PyMOL-Sapelo2|PyMOL]] || 2.3.0a0 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PyMOL-Sapelo2|PyMOL]] || 2.3.0a0 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[PyNBS-Sapelo2 |pyNBS]] || 0.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[Pynini-Teaching|Pynini]] || 2.0.8 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[PyPy-Sapelo2 |PyPy]] || 6.0.0 (2.7.14) || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[PyPy-Sapelo2 |PyPy]] || 6.0.0 (2.7.14) || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Pysam-Sapelo2 |Pysam]] || 0.10.0, 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Pysam-Sapelo2 |Pysam]] || 0.10.0, 0.13.0, 0.14.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Python-Sapelo2 |Python]] || 2.7.12, 2.7.14, 3.5.2, 3.6.4, 3.7.0, 3.7.2, 3.7.4, 3.8.2 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Python-Teaching|Python]] || 3.7.4, 2.7.16 || [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[PyTorch-Sapelo2|PyTorch]] || 0.3.1, 1.0.0, 1.2.0, 1.3.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[pyvcf-Sapelo2 |pyvcf]] || 0.6.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | <!-- | [[Pweave-Teaching|Pweave]] || 0.30.3 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| <span id ="Q"></span>[[q2-brocc-Sapelo2|q2-brocc]] || 2018.6.0.dev0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[QCTOOL-Sapelo2|QCTOOL]] || 2.0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[qiaseq-16S-Sapelo2|qiaseq-16S]] || 20190306 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[QIIME2- | | [[QIIME2-Sapelo2|QIIME2]] || 2018.2, 2018.4, 2018.6, 2018.8, 2018.11, 2019.1, 2020.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[QIIME2-Teaching|QIIME2]] || 2018.4, 2018.6, 2018.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[QIIME-Sapelo2|QIIME]] || 1.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[QIIME-Sapelo2|QIIME]] || 1.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 819: | Line 1,317: | ||
| [[Qualimap2-Sapelo2|Qualimap2]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Qualimap2-Sapelo2|Qualimap2]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Quantum Espresso-Sapelo2|Quantum Espresso]] || 6.2.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Quantum Espresso-Sapelo2|Quantum Espresso]] || 6.2.0, 6.3.0-QMCPACK-3.6.0-patch, 6.4.1, 6.5 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[QUAST-Sapelo2|QUAST]] || 4.2, 4.6.1, 4.6.3, 5.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[QUAST-Sapelo2|QUAST]] || 4.2, 4.6.1, 4.6.3, 5.0.0, 5.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[QMCPACK-Sapelo2|QMCPACK]] || 3.6.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[R- | | <span id ="R"></span>[[R-Sapelo2 |R]] || 3.4.4, 3.5.0, 3.6.1, 3.6.2, 4.0.0 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[racon-Sapelo2 |racon]] || 20180406 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[R-Teaching|R]] || 4.0.0 || [[:Category:Statistics|Statistics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[racon-Sapelo2 |racon]] || 20180406, 1.3.2, 1.4.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[racon-Teaching |racon]] || 1.4.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[RaGOO-Sapelo2|RaGOO]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[randfold-Sapelo2|randfold]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[randfold-Sapelo2|randfold]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 837: | Line 1,341: | ||
| [[RAxML-Sapelo2 |RAxML]] || 8.2.4, 8.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[RAxML-Sapelo2 |RAxML]] || 8.2.4, 8.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[RAxML-Teaching|RAxML]] || 8.2. | | [[RAxML-Teaching|RAxML]] || 8.2.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Ray-Sapelo2 |Ray]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Ray-Sapelo2 |Ray]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Rcorrector-Sapelo2|Rcorrector]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Rcorrector-Sapelo2|Rcorrector]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Realphy-Sapelo2|Realphy]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Reapr-Sapelo2|REAPR]] || 1.0.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Reapr-Sapelo2|REAPR]] || 1.0.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 847: | Line 1,353: | ||
| [[RECON-Sapelo2|RECON]] || 1.08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[RECON-Sapelo2|RECON]] || 1.08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[RedDog-Sapelo2|RedDog]] || 1beta.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Redundans-Sapelo2|Redundans]] || 0.14a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[RepeatExplorer-TAREAN-Sapelo2|RepeatExplorer-TAREAN]] || 11/09/2018 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[RepeatMasker-Sapelo2|RepeatMasker]] || 4.0.5, 4.0.7, 4.0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | <!-- | [[RepeatMasker-Teaching|RepeatMasker]] || 4.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Repeatmodeler-Sapelo2|Repeatmodeler]] || 1.0.11, 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
<!-- | [[RepeatModeler-Teaching|RepeatModeler]] || 1.0.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[RepeatScout-Sapelo2|RepeatScout]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[RepeatScout-Sapelo2|RepeatScout]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[RepeatScout-Teaching|RepeatScout]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[RepeatScout-Teaching|RepeatScout]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[REPET-Sapelo2|REPET]] || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[RESCRIPt-Sapelo2|RESCRIPt]] || 20200805 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[RevBayes-Sapelo2|RevBayes]] || 1.0.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[RevBayes-Teaching|RevBayes]] || 1.0.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[RGAugury-Sapelo2|RGAugury]] || 20191115 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[rjags-Sapelo2|rjags]] || 4.6 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[rjags-Sapelo2|rjags]] || 4.6 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 868: | Line 1,388: | ||
|- | |- | ||
| [[RNAmmer-Sapelo2|RNAmmer]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[RNAmmer-Sapelo2|RNAmmer]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[RNAz-Sapelo2|RNAz]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Roary-Sapelo2 |Roary]] || 3.12.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Roary-Sapelo2 |Roary]] || 3.12.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Rosetta-Sapelo2 |Rosetta]] || 2017.45.59812 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Rosetta-Sapelo2 |Rosetta]] || 2017.45.59812, 2019.47.61047 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[RSEM-Sapelo2 |RSEM]] || 1.3.0, 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[RSEM-Sapelo2 |RSEM]] || 1.3.0, 1.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[RSeQC-Sapelo2 |RSeQC]] || 3.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Rstudio-Sapelo2|Rstudio]] || 1.1.463, 1.2.5033 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Ruby-Sapelo2|Ruby]] || 2.5.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Ruby-Sapelo2|Ruby]] || 2.5.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 879: | Line 1,405: | ||
| [[runBNG-Sapelo2|runBNG]] || 1.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[runBNG-Sapelo2|runBNG]] || 1.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[Sailfish-Sapelo2|Sailfish]] || 0.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Salmon-Sapelo2|Salmon]] || 0.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="S"></span>[[Sage-Sapelo2|Sage]] || 8.0, 9.0, 9.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Salmon-Sapelo2|Salmon]] || 0.8.2, 0.10.2, 0.13.1, 0.14.1, 1.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SalmonTools-Sapelo2|SalmonTools]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SALSA-Sapelo2|SALSA]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SALSA-Sapelo2|SALSA]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[sambamba-Sapelo2|sambamba]] || 0.6.6, 0.6.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SAMtools- | | [[samblaster-Sapelo2|samblaster]] || 0.1.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SAMtools-Sapelo2|SAMtools]] || 0.1.19, 1.1, 1.3.1, 1.6, 1.9, 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SAMtools-Teaching|SAMtools]] || 0.1.20, 1.9, 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SANN-Sapelo2|SANN]] || 20190528 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[sbt-Sapelo2|sbt]] || 1.1.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[sbt-Sapelo2|sbt]] || 1.1.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 894: | Line 1,430: | ||
|- | |- | ||
| [[scikit-image-Sapelo2|scikit-image]] || 0.13.1, 0.14.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[scikit-image-Sapelo2|scikit-image]] || 0.13.1, 0.14.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Scoary-Sapelo2|Scoary]] || 1.6.16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SCons-Sapelo2|SCons]] || 2.5.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SCons-Sapelo2|SCons]] || 2.5.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SCOTCH-Sapelo2|SCOTCH]] || 6.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SCOTCH-Sapelo2|SCOTCH]] || 6.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[scram-Sapelo2|scram]] || 0.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[screen_assembly-Sapelo2|screen_assembly]] || 1.2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SeaDAS-Sapelo2|SeaDAS]] || 7.5.3 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[seaview-Sapelo2|seaview]] || 4.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[seaview-Sapelo2|seaview]] || 4.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[selscan-Sapelo2|selscan]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Seq-Gen-Sapelo2|Seq-Gen]] || 1.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Seq-Gen-Sapelo2|Seq-Gen]] || 1.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SeqKit-Sapelo2|SeqKit]] || 0.10.1, 0.10.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
<!-- | [[SeqKit-Teaching|SeqKit]] || 0.10.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[seqqs-Sapelo2|seqqs]] || 20140225 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[seqtk-Sapelo2|seqtk]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[seqtk-Sapelo2|seqtk]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SGA-Sapelo2|SGA]] || 0.10.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Shannon-Sapelo2|Shannon]] || 20190826 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[shapeit-Sapelo2|shapeit]] || v2.r904 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[shapeit-Sapelo2|shapeit]] || v2.r904 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Shasta-Sapelo2|Shasta]] || 0.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ShortStack-Sapelo2|ShortStack]] || 3.8.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ShortStack-Sapelo2|ShortStack]] || 3.8.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Sibelia-Sapelo2|Sibelia]] || 3.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SICER-Sapelo2|SICER]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SICER-Sapelo2|SICER]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SICERpy-Sapelo2|SICERpy]] || 0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Sickle-Sapelo2|Sickle]] || 1.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SignalP-Sapelo2|SignalP]] || 4.1f || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SignalP-Sapelo2|SignalP]] || 4.1f || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Silix-Sapelo2|Silix]] || 1.2.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Silix-Sapelo2|Silix]] || 1.2.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SimLoRD-Sapelo2|SimLoRD]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SINE_Scan-Sapelo2|SINE_Scan]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SINE_Scan-Sapelo2|SINE_Scan]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 921: | Line 1,487: | ||
| [[smoke-Sapelo2|smoke]] || 4.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[smoke-Sapelo2|smoke]] || 4.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[Smoove-Sapelo2|Smoove]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SMRTLINK-Teaching|SMRTLINK]] || 5.0.1.9585, 5.1.0.26412 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | | [[SMRTLINK-Sapelo2|SMRTLINK]] || 5.1.0.26412, 6.0.0.47841, 7.0.1.66975, 8.0.0.79519 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
<!-- | [[SMRTLINK-Teaching|SMRTLINK]] || 5.0.1.9585, 5.1.0.26412 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Smudgeplot-Sapelo2|Smudgeplot]] || 0.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Snakemake-Sapelo2|Snakemake]] || 5.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SNAP-Zoe-Sapelo2|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SNAP-Zoe-Sapelo2|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SNAP-Zoe-Teaching|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[SNAP-Zoe-Teaching|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Sniffles-Sapelo2|Sniffles]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SnoReport-Sapelo2|SnoReport]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[Snippy-Sapelo2|Snippy]] || 4.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SNP-ML-Sapelo2|SNP-ML]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SNP-ML-Sapelo2|SNP-ML]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 935: | Line 1,511: | ||
| [[snpEff-Sapelo2|snpEff]] || 4.3t || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[snpEff-Sapelo2|snpEff]] || 4.3t || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[snpEff-Teaching|SnpEff]] || 4.3t || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[snpEff-Teaching|SnpEff]] || 4.3t || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[SNPhylo-Sapelo2|SNPhylo]] || 20160204 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[snp-sites-Sapelo2|snp-sites]] || 2.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SOAPaligner-Sapelo2 |SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPaligner-Sapelo2 |SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 943: | Line 1,521: | ||
| [[SOAPdenovo2-Sapelo2|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SOAPdenovo2-Sapelo2|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SOAPdenovo2-Teaching|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[SOAPdenovo2-Teaching|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[somaticseq-Sapelo2|somaticseq]] || 3.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SOP-GPU-Sapelo2|SOP-GPU]] || 20180404 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SOP-GPU-Sapelo2|SOP-GPU]] || 20180404 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SortMeRNA-Sapelo2|SortMeRNA]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SortMeRNA-Sapelo2|SortMeRNA]] || 2.1, 3.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ | | [[SoX-Sapelo2|SoX]] || 14.4.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SPAdes- | | [[SPAdes-Sapelo2|SPAdes]] || 3.11.1, 3.12.0, 3.14.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[SPAdes-Teaching|SPAdes]] || 3.11.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[spams-Sapelo2|spams]] || 2.6.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[spams-Sapelo2|spams]] || 2.6.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Spanki-Sapelo2|Spanki]] || 0.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Spark-Sapelo2|Spark]] || 2.2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Spark-Sapelo2|Spark]] || 2.2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Speciesprimer-Sapelo2|Speciesprimer]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SpeedSeq-Sapelo2|SpeedSeq]] || 0.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Spine-Sapelo2|Spine]] || 0.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[SpliceGrapher-Sapelo2|SpliceGrapher]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Splitstree4-Sapelo2|Splitstree4]] || 4.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SPM-Sapelo2|SPM]] || 12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SPM-Sapelo2|SPM]] || 12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SRAToolKit-Sapelo2 |SRAToolKit]] || 2.8.2-1, 2.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SRAToolKit-Sapelo2 |SRAToolKit]] || 2.8.2-1, 2.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[sRNAWorkbench-Sapelo2|sRNAWorkbench]] || 4.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SSAHA2-Sapelo2 |SSAHA2]] || 2.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SSAHA2-Sapelo2 |SSAHA2]] || 2.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SSPACE-longread-Teaching|SSPACE-longread]] || 1-1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[SSPACE-longread-Teaching|SSPACE-longread]] || 1-1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[SSPACE-STANDARD-Teaching|SSPACE-STANDARD]] || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | | [[SSPACE-STANDARD-Teaching|SSPACE-STANDARD]] || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[SSPACE-Sapelo2|SSPACE]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SSPACE-Sapelo2|SSPACE]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Stacks-Sapelo2|Stacks]] || 1.48, 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Stacks-Sapelo2|Stacks]] || 1.48, 2.2, 2.3, 2.3b, 2.3d, 2.3e || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Stacks-Teaching|Stacks]] || 2.0, 1.48 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Stacks-Teaching|Stacks]] || 2.0, 1.48 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Stampy-Sapelo2|Stampy]] || 1.0.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[STAR-Fusion-Sapelo2|STAR-Fusion]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[STAR-Fusion-Sapelo2|STAR-Fusion]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[STAR-Sapelo2|STAR]] || 2.5.3a, 2.6.0c, 2.6.1c | | [[STAR-Sapelo2|STAR]] || 2.5.3a, 2.6.0c, 2.6.1c, 2.7.1a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[STAR-Teaching|STAR]] || 2.5.3a, 2.6.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[StrAuto-Sapelo2|StrAuto]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[StrAuto-Sapelo2|StrAuto]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[StringTie-Sapelo2|StringTie]] || 1.3.3, 1.3.4d || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[StringTie-Sapelo2|StringTie]] || 1.3.3, 1.3.4d, 2.0.3, 2.0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[StringTie-Teaching|StringTie]] || 1. | | [[StringTie-Teaching|StringTie]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Structure-Sapelo2|Structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Structure-Sapelo2|Structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[Structure-Teaching|Structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[Subread-Sapelo2|Subread]] || 1.6.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Subread-Sapelo2|Subread]] || 1.6.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 992: | Line 1,592: | ||
|- | |- | ||
| [[Supernova-Sapelo2|Supernova]] || 2.0.1, 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Supernova-Sapelo2|Supernova]] || 2.0.1, 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[SUPPA-Sapelo2|SUPPA]] || 2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SVDetect-Sapelo2|SVDetect]] || 0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SVDetect-Sapelo2|SVDetect]] || 0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[svtools-Sapelo2|svtools]] || 0.5.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[SWIG-Sapelo2|SWIG]] || 3.0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[SWIG-Sapelo2|SWIG]] || 3.0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| | | [[Synima-Sapelo2|Synima]] || 20181205 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Tbl2asn-Sapelo2|Tbl2asn]] || 04172018 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="T"></span>[[Tabix-Sapelo2|Tabix]] || 0.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[TASSEL-Sapelo2|TASSEL]] || 5.2.44 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Tbl2asn-Sapelo2|Tbl2asn]] || 04172018, 03282019, 05012020 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[TCSF_IMRA-Sapelo2|TCSF_IMRA]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[TCSF_IMRA-Sapelo2|TCSF_IMRA]] || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 1,005: | Line 1,613: | ||
| [[TensorFlow-models-Sapelo2|TensorFlow-models]] || 20180620 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[TensorFlow-models-Sapelo2|TensorFlow-models]] || 20180620 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TensorFlow-Sapelo2|TensorFlow]] || 1.8.0, 1.10.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[TensorFlow-Sapelo2|TensorFlow]] || 1.8.0, 1.10.1, 1.12.0, 1.14 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Theano-Sapelo2|Theano]] || 0.9.0, 1.0.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ | | [[TigMint-Sapelo2|TigMint]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TMHMM-Sapelo2|TMHMM]] || 2.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[TMHMM-Sapelo2|TMHMM]] || 2.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Tophat-Sapelo2|Tophat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[tmux-Sapelo2|tmux]] || 2.9 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Tombo-Sapelo2|Tombo]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Tophat-Sapelo2|Tophat]] || 2.1.0, 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[TopHat-Teaching|TopHat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[TopHat-Teaching|TopHat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[torchvision-Sapelo2|torchvision]] || 0.5.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[TPP-Sapelo2|TPP]] || 5.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[TPP-Sapelo2|TPP]] || 5.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[TransDecoder-Sapelo2|TransDecoder]] || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[tqdm-Sapelo2|tqdm]] || 4.43.0, 4.44.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[TransDecoder-Sapelo2|TransDecoder]] || 2.1.0, 5.3.0, 5.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Transposome-Sapelo2|Transposome]] || 0.12.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Transrate-Sapelo2|Transrate]] || 1.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[Transrate-Sapelo2|Transrate]] || 1.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[TreeMix-Sapelo2|TreeMix]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[TreeTime-Sapelo2|TreeTime]] || 0.6.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[trimAl-Sapelo2|TrimAl]] || 1.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[trimAl-Sapelo2|TrimAl]] || 1.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 1,023: | Line 1,651: | ||
| [[Trimmomatic-Sapelo2|Trimmomatic]] || 0.36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Trimmomatic-Sapelo2|Trimmomatic]] || 0.36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trimmomatic-Teaching|Trimmomatic]] || 0.36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Trimmomatic-Teaching|Trimmomatic]] || 0.36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[Trim_Galore-Sapelo2|Trim_Galore]] || 0.4.5 | | [[Trim_Galore-Sapelo2|Trim_Galore]] || 0.4.5, 0.6.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trinity- | | [[Trinity-Sapelo2|Trinity]] || r20140717, 2.5.1, 2.6.6, 2.8.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Trinotate-Sapelo2|Trinotate]] || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Trinity-Teaching|Trinity]] || 2.6.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[Trinotate-Sapelo2|Trinotate]] || 3.1.1, 3.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[tRNAscan-SE-Sapelo2|TRNAscan-SE]] || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[tRNAscan-SE-Sapelo2|TRNAscan-SE]] || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="U">[[UCLUST-Sapelo2|UCLUST]] || 1.2.22q || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="U"></span>[[UCLUST-Sapelo2|UCLUST]] || 1.2.22q || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[ucsc-Sapelo2|ucsc]] || 359 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ucsc-Sapelo2|ucsc]] || 359 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[UMI-tools-Sapelo2|UMI-tools]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[UPP-Sapelo2|UPP]] || 3.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[UPP-Sapelo2|UPP]] || 3.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[USEARCH-Sapelo2|USEARCH]] || 10.0.240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[USEARCH-Sapelo2|USEARCH]] || 10.0.240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[Unicycler-Sapelo2|Unicycler]] || 0.4.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| <span id ="V"></span>[[VarScan-Sapelo2|VarScan]] || 2.4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="V"></span>[[VarScan-Sapelo2|VarScan]] || 2.4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 1,048: | Line 1,680: | ||
|- | |- | ||
| [[vcf2diploid-Sapelo2|vcf2diploid]] || 0.2.6a || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[vcf2diploid-Sapelo2|vcf2diploid]] || 0.2.6a || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[vcf2maf-Sapelo2|vcf2maf]] || 20200520 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[vcf2phylip-Sapelo2|vcf2phylip]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[vcf2phylip-Sapelo2|vcf2phylip]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 1,055: | Line 1,689: | ||
| [[VCFtools-Sapelo2|VCFtools]] || 0.1.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[VCFtools-Sapelo2|VCFtools]] || 0.1.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[VCFtools-Teaching|VCFtools]] || 0.1.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[VCFtools-Teaching|VCFtools]] || 0.1.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- --> | ||
| [[Velvet-Sapelo2|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Velvet-Sapelo2|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| [[Velvet-Teaching|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | <!-- | [[Velvet-Teaching|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- --> | |||
| [[VelvetOptimiser-Sapelo2|VelvetOptimiser]] || 2.2.5, 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[ViennaRNA-Sapelo2|ViennaRNA]] || 2.4.3, 2.4.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[ViennaRNA-Sapelo2|ViennaRNA]] || 2.4.3, 2.4.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[ViewBS-Sapelo2|ViewBS]] || 0.1.7, 0.1.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[Vmatch-Sapelo2|Vmatch]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[Vmatch-Sapelo2|Vmatch]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
Line 1,067: | Line 1,705: | ||
| [[VSEARCH-Sapelo2|VSEARCH]] || 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[VSEARCH-Sapelo2|VSEARCH]] || 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="W">[[WGS-Sapelo2|WGS]] || 8.3rc2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="W"></span>[[WGS-Sapelo2|WGS]] || 8.3rc2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| [[WASP-Sapelo2|WASP]] || 0.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[WebLogo-Sapelo2|WebLogo]] || 3.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[WEKA-Sapelo2|WEKA]] || 3.8.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| [[WPS-Sapelo2|WPS]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[WPS-Sapelo2|WPS]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[WPS-Teaching|WPS]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[WRF-Chem-Sapelo2|WRF-Chem]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[WRF-Chem-Sapelo2|WRF-Chem]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
Line 1,077: | Line 1,723: | ||
| [[WRF-Sapelo2|WRF]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[WRF-Sapelo2|WRF]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!-- | [[WRF-Teaching|WRF]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |||
| [[WRFDA-Teaching|WRFDA]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | |||
|- --> | |||
| [[WU Blast-Sapelo2|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | [[WU Blast-Sapelo2|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
| <span id ="X">[[xforms-Sapelo2|xforms]] || 1.2.4 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="X"></span> <!-- [[xdot-Teaching|xdot]] || 1.1 || [[:Category:Graphics|Graphics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |||
| --> [[xforms-Sapelo2|xforms]] || 1.2.4 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | |||
|- | |- | ||
| <span id ="Y">[[YASRA-Sapelo2|YASRA]] || 2.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | | <span id ="Y"></span>[[YASRA-Sapelo2|YASRA]] || 2.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]] | ||
|- | |- | ||
<!--LIST END--> | <!--LIST END--> |
Latest revision as of 23:18, 27 October 2020
Below is a partial list of software packages installed on Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching:
module spider
You can also use the command above to search for a specific application. For more information, please see Lmod.
Note: Although we have not made individual software pages for the applications installed on on the Slurm test cluster (Sap2test), there are currently over 550 software packages installed there. For information on software installed there, please see Software on sap2test.
Installed Software List
Last updated 2020-10-27. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z