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Below is a partial list of software packages installed on Sapelo and Sapelo2 (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2, along with a short description, please run the following command on Sapelo2:
Below is a partial list of software packages installed on Sapelo, Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching:
<pre class="gcommand">
<pre class="gcommand">
module spider
module spider
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<!--LIST BEGIN-->
<!--LIST BEGIN-->
| [[4p-Sapelo | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="0">[[4p-Sapelo | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[4p-Sapelo2 | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[4p-Sapelo2 | 4p]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[ABySS-Sapelo|ABySS]] ||2.0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="A">[[ABySS-Sapelo|ABySS]] ||2.0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[ABySS-Sapelo2|ABySS]] ||1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
| [[ABySS-Sapelo2|ABySS]] ||1.9.0, 2.0.2, 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[aeneas-Sapelo|aeneas]] || 1.7.3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| <span id="B"></span> [[bcl2fastq-Sapelo|bcl2fastq]] || 2.17.1.14  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AFNI-Sapelo2|AFNI]] || 17.3.05 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AGE-Sapelo|AGE]] || 0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AlignGraph-Sapelo2|AlignGraph]] || 20180709 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Allmaps-Sapelo|Allmaps]] || 0.6.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AlleleSeq_pipeline-Sapelo2|AlleleSeq_pipeline]] || 1.2a || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AMBER-Sapelo|AMBER]] || 14 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AMBER-Sapelo2|AMBER]] || 14 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[amos-Sapelo|amos]] || 3.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AMOS-Sapelo2|AMOS]] || 3.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Anaconda-Sapelo|Anaconda]] || 2.2.0, 2.5.0, 3-2.2.0, 2-4.1.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Anaconda2-Sapelo|Anaconda2]] || 4.2.0, 4.3.0, 4.4.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Anaconda2-Sapelo2|Anaconda2]] || 5.0.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Anaconda3-Sapelo|Anaconda3]] || 4.2.0, 4.3.0, 5.0.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Anaconda3-Sapelo2|Anaconda3]] || 5.0.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ANI-Sapelo|ANI]]  || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ANNOgesic-Sapelo|ANNOgesic]]  || 0.6.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[annovar-Sapelo2|annovar]] || 2017Jul16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ANSYS-Sapelo|ANSYS]] || 16.2 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Apache-ant-Sapelo|apache-ant]] || 1.9.6 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Aragorn-Sapelo2|Aragorn]] || 1.2.38 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ARC-Sapelo|ARC]]  ||1.1.4-beta|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Arlequin-Sapelo2|Arlequin]] || 3.5.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ART-Sapelo|ART]] || 20160605 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ART-Sapelo2|ART]] || 20160605 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Artemis-Sapelo2|Artemis]] || 17.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="A">[[Artemis-Teaching|Artemis]]  || 17.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AStalavista-Sapelo|AStalavista]] || 3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ASTRAL-Sapelo2|ASTRAL]] || 5.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Augustus-Sapelo|augustus]]  || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[AUGUSTUS-Sapelo2|AUGUSTUS]]  || 3.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="A">[[AUGUSTUS-Teaching|AUGUSTUS]]  || 3.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B"></span>[[BAGEL-Sapelo|BAGEL]] || 2016.12.14, 2017.02.13 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BaitsTools-Sapelo|BaitsTools]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bam-readcount-Sapelo|bam-readcount]] || 0.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bamtools-Sapelo|Bamtools]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BamTools-Sapelo2|BamTools]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Barrnap-Sapelo2|Barrnap]] || 0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[basespace-cli-Sapelo|basespace-cli]] || 0.8.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BayesAss-Sapelo2|BayesAss]] || 3.0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bazel-Sapelo|Bazel]] || 0.4.5 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bazel-Sapelo2|Bazel]] || 0.8.1, 0.11.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BBMap-Sapelo | BBMap]] || 35.82 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BBMap-Sapelo2 | BBMap]] || 37.67 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bcftools-Sapelo|bcftools]] || 1.6  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BCFtools-Sapelo2|BCFtools]] || 1.3.1, 1.6, 1.8  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[BCFtools-Teaching|BCFtools]]  || 1.8, 1.6, 1.3.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bcl2fastq-Sapelo|bcl2fastq]] || 2.17.1.14  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bcl2fastq-Sapelo2|bcl2fastq]] || 2.20.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEAST-Sapelo|BEAST]] || 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Beast-Sapelo2|Beast]] || 2.4.8pre || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEDops-Sapelo|BEDops]] || 2.4.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEDOPS-Sapelo2|BEDOPS]] || 2.4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEDTools-Sapelo|BEDTools]] || 2.24.0, 2.25.0  2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEDTools-Sapelo2|BEDTools]] || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[BEDTools-Teaching|BEDTools]]  || 2.26.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="B">[[BioPerl-Teaching|BioPerl]]  || 1.7.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[Biopython-Teaching|Biopython]]  || 1.68|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BLAST-Sapelo2|BLAST]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BEST-Sapelo|BEST]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BiBench-Sapelo|BiBench]]  || 0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bioawk-Sapelo|bioawk]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BionanoSolve-Sapelo2|BionanoSolve]] || 3.2.1-04122018 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BioPerl-Sapelo|BioPerl]] || 1.6.923 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BioPerl-Sapelo2|BioPerl]] || 1.7.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BioPython-Sapelo|BioPython]] || 1.66 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BioPython-Sapelo2|BioPython]] || 1.68 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bismark-Sapelo|Bismark]] || 0.16.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bison-Sapelo2|Bison]] || 2.7, 3.0.2, 3.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="B">[[BLAST-Teaching|BLAST]]  || 2.2.26|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[BLAST+-Teaching|BLAST+]]  || 2.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Blat-Sapelo|Blat]] || 36 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BLAT-Sapelo2|BLAT]] || 3.4, 3.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Boost-Sapelo|Boost]] || 1.47.0, 1.57.0, 1.59.0 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Boost-Sapelo2|Boost]] || 1.54.0, 1.61.0, 1.63.0, 1.65.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bowtie-Sapelo|bowtie]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Bowtie-Sapelo2|Bowtie]] || 1.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bowtie2-Sapelo|bowtie2]] || 2.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bowtie2-Sapelo2|bowtie2]] || 2.2.3, 2.3.3, 2.3.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[Bowtie2-Teaching|Bowtie2]]  || 2.3.4.1, 2.3.3, 2.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BP&P-Sapelo|BP&P]] || 4.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[braker-Sapelo2|braker]] || 2.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[breakdancer-Sapelo|breakdancer]] || 1.1.2_2013_03_08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[BreakDancer-Sapelo2|BreakDancer]] || 1.4.5-foss-2016b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BS Seeker2-Sapelo|BS Seeker2]] ||  2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] ||  [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BUSCO-Sapelo| BUSCO]] ||3.0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[busco-Sapelo2| busco]] ||3.0.2, 2.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[bwa-Sapelo| Burrows-Wheeler Aligner (BWA)]] || 0.7.10, 0.7.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[BWA-Sapelo2| BWA ]] || 0.7.15, 0.7.17 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="B">[[BWA-Teaching|BWA]]  || 0.7.17, 0.7.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="C"></span> [[Caffe-Sapelo|Caffe]] || 12.04.2015|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Caffe-Sapelo2|Caffe]] || 04082018 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Cairo-Sapelo|Cairo]]  || 1.10.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cairo-Sapelo2|cairo]]  || 1.14.6, 1.14.10, 1.14.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[canu-Sapelo|canu]] || 1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[canu-Sapelo2|canu]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="C">[[canu-Teaching|Canu]]  || 1.7, 1.6, 1.5, 1.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CAP-miRSeq-Sapelo2|CAP-miRSeq]] || 05/20184 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cap3-Sapelo|cap3]] || 03/09/2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CAP3-Sapelo2|CAP3]] || 03092015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cd-hit-Sapelo|cdhit]] || 4.6.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CD-HIT-Sapelo2|CD-HIT]] || 4.6.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cDNA_Cupcake-Sapelo|CDNA_Cupcake]]  ||3.9|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CellProfiler-Sapelo|CellProfiler]]  || 2.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[censor-Sapelo|censor]] || 4.2.29 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CENSOR-Sapelo2|CENSOR]]  || 4.2.29 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Centrifuge-Sapelo|Centrifuge]]  || 2.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CFOUR-Sapelo|CFOUR]] || 1.2, 2.00-beta || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CGAT-Sapelo|CGAT]] || 0.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CGmapTools-Sapelo|CGmapTools]]  || 0.0.3b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CheckM-Sapelo|CheckM]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Check-Sapelo|Check]]  || 0.10.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Chimera-Sapelo2|Chimera]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Chromosomer-Sapelo|Chromosomer]]  || 0.1.4a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CIRCexplorer2-Sapelo|CIRCexplorer2]]  || 2.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[circlator-Sapelo|circlator]] || 1.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[circlator-Sapelo2|circlator]] || 1.5.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[circos-Sapelo|circos]] || 0.69|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Circos-Sapelo2|Circos]] || 0.69-6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cisa-Sapelo|cisa]] || 20140304|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Cleaveland4-Sapelo|Cleaveland4]] || 4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Cleaveland4-Sapelo2|Cleaveland4]] || 4.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Clustal-Omega-Sapelo2|Clustal-Omega]] || 1.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[ClustalW-Sapelo|ClustalW]]  || 1.83 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ClustalW2-Sapelo2|ClustalW2]]  || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[clusteringConsensus-Sapelo|clusteringConsensus]] || 1.02|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cmake-Sapelo|cmake]] || 2.8.12.2, 3.0.2, 3.7.2, 3.9.3|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CMake-Sapelo2|CMake]] || 3.0.0, 3.4.3, 3.5.2, 3.6.1, 3.6.2, 3.7.2, 3.8.0, 3.9.1, 3.9.5, 3.10.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Cnv-seq-Sapelo|cnv-seq]]  || 03132017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CNVnator-Sapelo|CNVnator]]  || 0.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CNVnator-Sapelo2|CNVnator]]  || 0.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CONSEL-Sapelo|CONSEL]] || 0.20 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Conspred-Sapelo|Conspred]] || v1.32 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cortex_var-Sapelo|cortex_var]] || 1.0.5.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CPLEX-Sapelo|CPLEX]] || 12.6.3 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CPLEX-Sapelo2|CPLEX]] || 12.6.3 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Croco_tools-Sapelo|Croco_tools]] || 1.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CrossMap-Sapelo|CrossMap]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CUDA-Sapelo|CUDA]] || 5.0.35, 6.5.14, 7.5.18, 8.0.61 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CUDA-Sapelo2|CUDA]] || 7.0.28, 7.5.18, 8.0.61, 8.0.61_375.26-GCC-5.4.0-2.26, 9.0.176 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cufflinks-Sapelo|cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Cufflinks-Sapelo2|Cufflinks]] || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="C">[[Cufflinks-Teaching|Cufflinks]]  || 2.2.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cURL-Sapelo2|cURL]] || 7.49.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cutadapt-Sapelo|Cutadapt]]  || 1.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cutadapt-Sapelo2|cutadapt]]  || 1.9.1, 1.16|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cv2-Sapelo|cv2]] || 3.3.0.10 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[CytoScape-Sapelo|CytoScape]] || 3.3.0  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="D"></span> [[Danpos2-Sapelo|Danpos2]] || 2.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[datamash-Sapelo|datamash]] || 1.0.7 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="D">[[DBG2OLC-Teaching|DBG2OLC]]  || 20170208|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Ddocent-Sapelo|ddocent]]  || 2.2.16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DDSCAT-Sapelo2|DDSCAT]] || 7.3.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DeconSeq-Sapelo|DeconSeq]] || 0.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[deepnet-Sapelo|deepnet]] || 20151013 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[deeptools-Sapelo|deeptools]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[deepTools-Sapelo2|deepTools]] || 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DeFCoM-Sapelo|DeFCoM]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DELLY-Sapelo|DELLY]] || 0.7.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[dendropy-Sapelo|dendropy]] || 3.12.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DendroPy-Sapelo2|DendroPy]] || 4.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[depict-Sapelo|depict]] || 140721 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[detect-NAHR-Sapelo|detect-NAHR]] || 2015.09.16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DIAMOND-Sapelo|DIAMOND]] ||0.8.36|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DIAMOND-Sapelo2|DIAMOND]] ||1.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DISCOVARdenovo-Sapelo2|DISCOVARdenovo]]  || 52488 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DLCpar-Sapelo|DLCpar]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[DLCpar-Sapelo2|DLCpar]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Doxygen-Sapelo2|Doxygen]]  || 1.8.7, 1.8.11, 1.8.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="E"></span> [[EMBOSS-Sapelo|EMBOSS]] || 6.5.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[EMBOSS-Sapelo2|EMBOSS]] || 6.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="E">[[EMBOSS-Teaching|EMBOSS]]  || 6.6.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[emirge-Sapelo|emirge]] ||0.61.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[EMMAX-Sapelo2|EMMAX beta]] || beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[EIGENSOFT-Sapelo2|EIGENSOFT]] || 6.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[EPIG-Seq-Sapelo | EPIG-Seq]] || v01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[espeak-Sapelo|espeak]] || 1.48.04 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ESMF-Sapelo2|ESMF]] || 7.0.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[exabayes-Sapelo | exabayes]] || 1.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ExaML-Sapelo | ExaML]] || 3.0.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[exonerate-Sapelo | exonerate]] || 2.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Exonerate-Sapelo2 | Exonerate]] || 2.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Expander-Sapelo|Expander]]  || 7.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="F"></span>[[FALCON-Sapelo|FALCON]] || 0.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FALCON-Sapelo2|FALCON]]  ||02282018_unzip|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Fast-Plast-Sapelo2|Fast-Plast]]  ||1.2.6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FASTA-Sapelo2|FASTA]]  || 36.3.5e || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastME-Sapelo|FastME]]  || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastME-Sapelo2|FastME]]  || 2.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[fastphase-Sapelo|fastphase]] || 1.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastPlast-Sapelo|FastPlast]]  ||1.2.6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastQC-Sapelo|FastQC]] || 0.11.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastQC-Sapelo2|FastQC]] || 0.11.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FASTQSim-Sapelo|FASTQSim]]  || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[fastStructure-Sapelo|fastStructure]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[fastSTRUCTURE-Sapelo2|FastSTRUCTURE]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastTree-Sapelo2 | FastTree]] || 2.1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FastX-Sapelo|FastX]] || 0.0.13.2, 0.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FASTX-Toolkit-Sapelo2|FASTX-Toolkit]] || 0.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FFmpeg-Sapelo|FFmpeg]] || 2.8.2 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FFmpeg-Sapelo2|FFmpeg]] || 3.1.3, 3.4.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FFTW-Sapelo|FFTW]] || 2.1.5, 3.3.4 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FFTW-Sapelo2|FFTW]] || 3.3.4, 3.3.6, 3.3.7 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FIAT-Sapelo2|FIAT]] || 1.6.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Find_Cns-Sapelo|Find_Cns]] || 2016/07/21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[fineRADstructure-Sapelo|fineRADstructure]] || 2016/12/09 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FineSTRUCTURE-Sapelo|FineSTRUCTURE]] || 2.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[fineSTRUCTURE-Sapelo2|fineSTRUCTURE]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FLASH-Sapelo|FLASH]] || 1.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FLASH-Sapelo2|FLASH]] || 1.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FLTK-Sapelo2|FLTK]] || 1.3.4 || [[:Category:Other|Other]], [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FoX-Sapelo2|FoX]] || 4.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Freebayes-Sapelo|Freebayes]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[freebayes-Sapelo2|Freebayes]]  ||1.2.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FreeSurfer-Sapelo|FreeSurfer]] || 6.0.0 || [[:Category:Medical-Informatics|Medical-Informatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[FriBidi-Sapelo2|FriBidi]] || 1.0.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="G">[[GAG-Teaching|GAG]]  || 2.0.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="G"></span>[[gam-ngs-Sapelo|gam-ngs]] || 1.1b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAMESS-Sapelo|GAMESS]] || 5Dec2014 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAMESS-Sapelo2|GAMESS]] || 14Feb2018 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAP-Sapelo|GAP]] || 4.8.7 || [[:Category:Other|Other]], [[:Category:Programming|Programming]]  || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GapFiller-Sapelo|GapFiller]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="G">[[GapFiller-Teaching|GapFiller]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAPIT-Sapelo2|GAPIT]] || 20180524 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gat-Sapelo|gat]]  || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gatk-Sapelo|gatk]] || 3.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GATK-Sapelo2|GATK]] || 3.4-0, 3.8-0, 4.0.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="G">[[GATK-Teaching|GATK]]  || 3.8-0, 3.4-0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAUSSIAN-Sapelo|GAUSSIAN]] || 09 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAUSSIAN-Sapelo2|GAUSSIAN]] || 09 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GaussView-Sapelo|GaussView]] || 5 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GAWN-Sapelo|GAWN]]  ||0.3.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gblocks-Sapelo|Gblocks]] || 0.91b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GBlocks-Sapelo2|GBlocks]]  ||0.91b|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GCTA-Sapelo | GCTA]] || 1.26.0  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GCTA-Sapelo2 | GCTA]] || 1.26.0  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gdal-Sapelo|gdal]] || 2.1.0 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GDAL-Sapelo2|GDAL]] || 2.1.0, 2.2.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GDC-client-Sapelo | GDC-client]] || 1.0.1  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gdc-client-Sapelo2 | gdc-client]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gd-Sapelo|gd]]  || 2.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GD-Sapelo2|GD]] || 2.66 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GEM-Sapelo | GEM]] || 2.5  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gemini-Sapelo | Gemini]] || 0.20.0  || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GeneMark-ES-Sapelo|GeneMark-ES]]  || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GeneMark.hmm.eukaryotic-Sapelo2|GeneMark.hmm.eukaryotic]]  || 4.30 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GeneMarkES-Sapelo2|GeneMarkES]]  || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="G">[[GeneMarkES-Teaching|GeneMarkES]]  || 4.33|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GeneMarkS-Sapelo2|GeneMarkS]]  ||4.30|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GeneMarkS-T-Sapelo2|GeneMarkS-T]]  || 4.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gengetopt-Sapelo|Gengetopt]]  ||2.22|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GenomeTools-Sapelo|GenomeTools]]  ||1.5.9|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GenomeTools-Sapelo2|GenomeTools]] ||1.5.9|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Genome-Sapelo2|Genome]] || Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GenomeTools-Sapelo | GenomeTools]] || 1.5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SMRTanalysis-Sapelo|GenomicConsensus]] || 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gensim-Sapelo|gensim]] || 2.3.0 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[geos-Sapelo|geos]] || 3.5.0 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GEOS-Sapelo2|GEOS]] || 3.6.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gerud3-Sapelo|Gerud3]]  || 12202017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gff3ToGenePred-Sapelo|gff3ToGenePred]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gffcompare-Sapelo|gffcompare]]  || 0.10.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gffcompare-Sapelo2|Gffcompare]]  || 0.10.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GFlow-Sapelo2| GFlow]] || 0.1.7 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gffread-Sapelo2|gffread]]  || 0.9.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[git-Sapelo|git]] || 1.7.1, 2.7.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GKIN-Sapelo|GKIN]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GLib-Sapelo2| GLib]] || 2.49.5, 2.53.5, 2.54.3 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GLPK-Sapelo2|GLPK]]  || 4.63, 4.65 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gmap-gsnap-Sapelo|gmap-gsnap]] || 2017-01-14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMAP-GSNAP-Sapelo2|GMAP-GSNAP]] || 2016-11-07 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMA-Sapelo|GMA]]  ||0.1.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMATA-Sapelo|GMATA]] || 2017-01-14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMP-Sapelo|GMP]] || 4.3.1, 6.0.0 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMP-Sapelo2|GMP]] || 4.3.2, 6.1.1, 6.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GMPFRXX-Sapelo|GMPFRXX]] || 20081116 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GNU Compilers-Sapelo|GNU Compilers]] || 4.4.7, 4.7.4, 5.3.0 || [[:Category:Compiler|Compiler]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gnuplot-Sapelo|gnuplot]]  || 4.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[gnuplot-Sapelo2|gnuplot]]  || 5.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GObject-Introspection-Sapelo2|GObject-Introspection]]  || 1.49.1, 1.54.1 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[google-cloud-Sapelo|google-cloud]] || 0.32.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[grace-Sapelo| grace]] || 5.1.25 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[grace-Sapelo2| grace]] || 5.1.25 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GrADS-Sapelo|GrADS]] || 2.1a3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GraftM-Sapelo|GraftM]] || 0.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Graphviz-Sapelo|Graphviz]]  ||2.40.1|| [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Graphviz-Sapelo2|Graphviz]]  ||2.40.1|| [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gromacs-Sapelo | Gromacs]] || 5.0.2, 5.1.3 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GSL-Sapelo|GSL]] || 1.16 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GSL-Sapelo2|GSL]] || 1.16, 2.1, 2.3. 2.4 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GStreamer-Sapelo2|GStreamer]]  || 1.14.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GTK+-Sapelo2|GTK+]] || 2.24.31 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[GTS-Sapelo2|GTS]] || 0.7.6 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Gdk-pixbuf-Sapelo2|Gdk-pixbuf]] || 2.36.0 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Ghostscript-Sapelo2|Ghostscript]] || 9.20, 9.22 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Guile-Sapelo2|Guile]] || 1.8.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="H"></span> [[h5py-Sapelo|h5py]] || 2.6.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[hapcut2-Sapelo|hapcut2]] || 20170126 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Haploview-Sapelo|Haploview]] || 4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Harp-Sapelo|harp]]  || 130306_105556 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HDF5-Sapelo | HDF5]] || 1.8.6, 1.8.14 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HGTFinder-Sapelo|HGTFinder]]  || 20170929 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HH-suite-Sapelo|HH-suite]]  || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Hic-pro-Sapelo|hic-pro]]  || 2.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HiCUP-Sapelo|HiCUP]]  ||0.5.9|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[hindex-Sapelo2|hindex]] || 1.42 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Hinge-Sapelo|HINGE]]  || 032717 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HipMer-Sapelo|HipMer]] || 0.9.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HISAT2-Sapelo|HISAT2]] ||2.1.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HISAT2-Sapelo2|HISAT2]] ||2.1.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Hmmer-Sapelo|Hmmer]] || 3.1b2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HMMER-Sapelo2|HMMER]] || 3.1b2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Homer-Sapelo|Homer]] || 4.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Homer-Sapelo2|Homer]] || 4.9.1, 4.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HPCGridRunner-Sapelo|HPCGridRunner]] || 1.0.2 || [[:Category:Bioinformatics|Tools]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HPCGridRunner-Sapelo2|HPCGridRunner]] || 1.0.2 || [[:Category:Bioinformatics|Tools]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[htseq-Sapelo|htseq]] || 0.6.1p1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HTSeq-Sapelo2|HTSeq]] || 0.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HUMAnN2-Sapelo|HUMAnN2]] || 0.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HyDe-Sapelo|HyDe]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[HyPhy-Sapelo|HyPhy]]  || 2.3.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="I"></span> [[IDBA-Sapelo | IDBA]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IGV-Sapelo | IGV]] || 2.3.81 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IGV-Sapelo2 | IGV]] || 2.4.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IGVTools-Sapelo |IGVTools]] ||2.3.81 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IGVTools-Sapelo2 |IGVTools]] ||2.3.98 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[illumiprocessor-Sapelo |illumiprocessor]] ||2.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Infernal-Sapelo2|Infernal]] || 1.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Intel Compilers-Sapelo|Intel Compilers]] || 14.0.0, 15.0.2 || [[:Category:Compiler|Compiler]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[iprscan-Sapelo|iprscan (InterProScan)]] || 5.16-55.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[iprscan-Sapelo2|iprscan (InterProScan)]] || 5.29-68.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ipyrad-Sapelo|ipyrad]] || 0.3.7, 0.5.15, 0.7.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ipyrad-Sapelo2|ipyrad]] || 0.7.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IQ-Tree-Sapelo|IQ-Tree]] || 1.5.5, 1.6.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IQ-Tree-Sapelo2|IQ-Tree]] || 1.5.5, 1.6.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[iRep-Sapelo|iRep]] || 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[I-TASSER-Sapelo|I-TASSER]] || 5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[IsoSeq_SA3nUP-Sapelo|IsoSeq_SA3nUP]]  || 09272017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ITSTool-Sapelo2|ITSTool]]  || 2.0.4 || [[:Category:Utility|Utility]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[iva-Sapelo|iva]] || 1.0.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="J"></span>[[JAGS-Sapelo|JAGS]] || 3.4.0, 4.1.0, 4.2.0 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[JAGS-Sapelo2|JAGS]] || 4.3.0 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[JasPer-Sapelo|JasPer]] || 1.900.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[JasPer-Sapelo2|JasPer]] || 1.900.1, 2.0.12 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Java-Sapelo|Java]] || 6, 7, 8 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Java-Sapelo2|Java]] || 1.8.0_92, 1.8.0_112, 1.8.0_121, 1.8.0_141, 1.8.0_144 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="J">[[Java-Teaching|Java]]  || 1.8.0_144, 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Jellyfish-Sapelo|Jellyfish]] || 2.2.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Jellyfish-Sapelo2|Jellyfish]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[JModelTest-Sapelo2|JModelTest]] || 2.1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Jupyter-Sapelo|Jupyter Notebook]] || 2.5.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="K"></span> [[Kaiju-Sapelo2|Kaiju]]  ||1.6.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[kallisto-Sapelo|kallisto]] || 0.42.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[kallisto-Sapelo2|kallisto]] || 0.43.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[KAT-Sapelo|KAT]]  || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[kentUtils-Sapelo|KentUtils]] || 302.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[keras-Sapelo|keras]] || 1.0.8, 2.0.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[keras-Sapelo2|keras]] || 2.0.6 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Kraken-Sapelo|Kraken]] || 0.10.5-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[KmerGenie-Sapelo|KmerGenie]] || 1.7016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="L"></span> [[LAME-Sapelo2|LAME]] || 3.100 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LAMMPS-Sapelo | LAMMPS]] || 16Aug13, 5Sep14, 10Aug15, 7Dec15, 16Feb16, 30Jul16, 17Nov16 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LAST-Sapelo|LAST]] || 719 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LASTZ-Sapelo|LASTZ]] || 1.02.00, 1.03.73 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LASTZ-Sapelo2|LASTZ]] || 1.04.00 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LDhat-Sapelo|LDhat]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LDhat-Sapelo2|LDhat]] || 2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LDhelmet-Sapelo|LDhelmet]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LDhelmet-Sapelo2|LDhelmet]] || 1.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LDhot-Sapelo|LDhot]] || 0.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LEfSe-Sapelo|LEfSe]] || 20160621 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[libradtran-Sapelo|libradtran]] || 1.7, 2.0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[librosa-Sapelo|librosa]] || 0.4.3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LIBSVM-Sapelo|LIBSVM]] || 3.21 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[lmod]] || 5.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LocARNA-Sapelo|LocARNA]] || 1.9.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LoFreq-Sapelo|LoFreq]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LoFreq-Sapelo2|LoFreq]] || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LongRanger-Sapelo2|LongRanger]]  ||2.2.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LS-DYNA-Sapelo2|LS-DYNA]] || 10.123355 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LS-PrePost-Sapelo2|LS-PrePost]] || 4.5 || [[:Category:Engineering|Engineering]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LTR_retriever-Sapelo|LTR_retriever]]  || 20170907 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LTR_retriever-Sapelo2|LTR_retriever]]  || 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LUMPY]] || 0.2.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LUMPY-Sapelo2|LUMPY]] || 0.2.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LZO-Sapelo|LZO]]  || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[LZO-Sapelo2|LZO]]  || 2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="M"></span>[[Macs2-Sapelo|MACS2]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Macs2-Sapelo2|MACS2]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MaCS-simulator-Sapelo|MaCS-simulator]] || 0.5d || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mafft-Sapelo|Mafft]] || 7.273-e || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MAFFT-Sapelo2|MAFFT]] || 7.273, 7.313 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="M">[[MAFFT-Teaching|MAFFT]]  || 7.313, 7.273, 7.130|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mageck-vispr-Sapelo|mageck-vispr]]  || 02242017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mageck-Sapelo|mageck]]  || 0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Magma-Sapelo|Magma]]  || 2.22-9 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mahotast-Sapelo|Mahotas]] || 1.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[mahotas-Sapelo2|mahotas]] || 1.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Maker-Sapelo2|Maker]] || 2.31.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Make-Sapelo|Make]]  || 4.2 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MaSuRCA-Sapelo|MaSuRCA]] || 3.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MaSuRCA-Sapelo2|MaSuRCA]] || 3.2.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MatLab-Sapelo|Matlab]] || R2015aSP1, R2015b, R2016b || [[:Category:Other|Other]], [[:Category:Programming|Programming]], [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mauve-Sapelo|Mauve]]  ||2.4.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mauve-Sapelo2|Mauve]]  ||2015-02-13|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Maven-Sapelo2|Maven]] || 3.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MaxBin-Sapelo | MaxBin]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MCScanX-Sapelo |MCScanX ]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MCScanX-Sapelo2 |MCScanX ]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MCScanX-transposed-Sapelo |MCScanX-transposed ]] || 0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MCL-Sapelo2|MCL]] || 14.137 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MDEnergy-Sapelo | MDEnergy]] || 2.3 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Megahit-Sapelo | Megahit]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MEGAHIT-Sapelo2 | MEGAHIT ]] || 1.1.1, 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MEGAN-Sapelo | MEGAN]] || 6.4.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MEME-Sapelo|MEME]] || 4.10.2, 4.11.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MEME-Sapelo2|MEME]] || 4.11.0, 5.0.0_1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Meraculous]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Meraculous-Sapelo2|Meraculous]] || 2.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mercurial-Sapelo | Mercurial ]] || 3.9 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mercurial-Sapelo2 | Mercurial ]] || 4.4.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MET-Sapelo2 | MET ]] || 7.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MetaBAT-Sapelo|MetaBAT]] || 20151110 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Metal-Sapelo|Metal]] || 20110325 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Metaphlan2-Sapelo|Metaphlan2]]  || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[metaSort-Sapelo|metaSort]]  || 1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Metavelvet-Sapelo|Metavelvet]] || 1.2.02 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MetavelvetSL-Sapelo|MetavelvetSL]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MethPipeline-Sapelo|MethPipeline]] || 0.1_120115 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[methylpy-Sapelo|methylpy]] || 08/25/2016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[methylpy-Sapelo2|methylpy]] || 1.2.9, 1.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[METIS-Sapelo2|METIS]] || 5.1.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MHAP-Sapelo|MHAP]] || 2.1.1 ||  [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Migrate-Sapelo|Migrate]] || 3.6.11 ||  [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[minced-Sapelo2|minced]] || 0.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Minimac3-Sapelo|Minimac3]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Minimap-Sapelo|Minimap]]  || 0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Minimap2-Sapelo|Minimap2]]  || 2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MiRanda-Sapelo|miRanda]]  || aug2010 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mirdeep-p-Sapelo|mirdeep-p]]  ||1.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mirdeep-p-Sapelo2|mirdeep-p]]  ||1.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MiRDeep2-Sapelo|miRDeep2]]  || 0.0.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MiRDeep2-Sapelo2|miRDeep2]]  || 0.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MISO-Sapelo|MISO]] || 09132016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MITE-Hunter-Sapelo2|MITE-Hunter]] || 11-2011 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MKL-Sapelo|MKL]] || 11.1, 11.2 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[mlehot-Sapelo|mlehot]] || 1.8.16 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MOABS-Sapelo|MOABS]] || 1.3.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MOCAT-Sapelo|MOCAT]] || 1.3r2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MOTHUR-Sapelo|MOTHUR]] || 1.37.5, 1.39.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mothur-Sapelo2|Mothur]] || 1.39.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[motif-Sapelo2| motif]] || 2.3.5, 2.3.8 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MP-EST-Sapelo|MP-EST]] || 1.5 || [[:Category:Programming|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MPFR-Sapelo|MPFR]] || 3.1.2 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MPFRC++-Sapelo|MPFRC++]] || 3.6.2 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Mplus-Sapelo|Mplus]] || 7.4 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MrBayes-Sapelo|MrBayes]] || 3.2.6 ||  [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MrBayes-Sapelo2|MrBayes]] || 3.2.6 ||  [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MrDemuxy-Sapelo|MrDemuxy]] || 1.2.0 ||  [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MREPS-Sapelo2|MREPS]]  || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MSTMap-Sapelo|MSTmap]] || 20170927 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MultiLoc2-Sapelo|MultiLoc2]] || 26-10-2009 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MultiMappingCounter-Sapelo|MultiMappingCounter]] || 21-09-2017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MultiQC-Sapelo2|MultiQC]] || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MUMmer-Sapelo|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MUMmer-Sapelo2|MUMmer]] || 3.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="M">[[MUMmer-Teaching|MUMmer]]  || 3.23|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MUSCLE-Sapelo|MUSCLE]] || 3.8.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MUSCLE-Sapelo2|MUSCLE]] || 3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MVFtools-Sapelo|MVFtools]]  || 10112017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[MuTect-Sapelo|MuTect]] || 1.1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="N"></span>[[NAMD-Sapelo|NAMD]] || 2.11 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NAMD-Sapelo2|NAMD]] || 2.12 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NASM-Sapelo2|NASM]] || 2.11, 2.12, 2.13 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NCBI Blast-Sapelo|NCBI Blast]] || 2.2.26 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NCBI Blast +-Sapelo|NCBI Blast +]] || 2.2.29 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ncbi_tools++-Sapelo|Ncbi_tools++]]  || 12.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NCBIBLAST+-Sapelo|NCBIBLAST+]]  || 2.7.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NCL-Sapelo2|NCL]]  || 6.4.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NeEstimator-Sapelo2|NeEstimator]] || 2.1 ||[[:Category:Bioinformatics|Bioinformatics]]|| [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NETCDF-Sapelo|NETCDF]] || 3.6.3, 4.1.3, 4.3.2 ||[[:Category:Library|Library]]|| [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Newbler-Sapelo|Newbler]] || 2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NextGenMap-Sapelo2|NextGenMap]] || 0.5.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ngmlr-Sapelo2|ngmlr]] || 0.2.6-beta || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NGS-Sapelo2|NGS]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NGS-QC-Toolkit-Sapelo|NGS-QC Toolkit]] || 2.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Ngsutils-Sapelo |Ngsutils]] || 0.5.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[nhPhyML-Sapelo2|nhPhyML]] || 20180515 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Nseg-Sapelo2|Nseg]] || 20180530 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NucleoATAC-Sapelo2|NucleoATAC]] || 0.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NWCHEM-Sapelo|NWCHEM]] || 6.5 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[NxTrim-Sapelo|NxTrim]] || v0.3.2-alpha || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="O"></span>[[Oases-Sapelo2|Oases]] || 0.2.08, 0.2.09 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OCaml-Sapelo2|OCaml]] || 4.01.0, 4.02.3 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Octave-Sapelo|Octave]] || 4.0.3 || [[:Category:Other|Other]], [[:Category:Programming|Programming]], [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Oligotyping-Sapelo|Oligotyping]] ||2.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OpenBUGS-Sapelo|OpenBUGS]] || 3.2.3 || [[:Category:Statistics|Statistics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OpenCV-Sapelo|OpenCV]] || 2.4.13.3, 3.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[opera-Sapelo|opera]] || 2.0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ORCA-Sapelo | ORCA]] || 3.0.3, 4.0.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ORCA-Sapelo2 | ORCA]] || 3.0.3, 4.0.0.2, 4.0.1.2 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ORGanelle_ASeMbler-Sapelo2|ORGASM]]  ||0.2.03|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ORGanelle_ASeMbler-Sapelo2|ORGanelle_ASeMbler]]  ||0.2.03|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OrthoFiller-Sapelo|OrthoFiller]]  || 1.1.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OrthoFinder-Sapelo|OrthoFinder]]  ||1.1.8|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[OrthoFinder-Sapelo2|OrthoFinder]]  || 2.1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="O">[[OrthoFinder-Teaching|OrthoFinder]]  || 2.1.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P"></span> [[PAGIT-Sapelo2|PAGIT]]  || 1.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[palfinder-Sapelo | palfinder]] || 0.02.04 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Paml-Sapelo|paml]]  || 4.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PAML-Sapelo2|PAML]]  || 4.9h || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[PAML-Teaching|PAML]]  || 4.9h|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pandas-Sapelo | pandas]] || 0.16.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PANDAseq-Sapelo2 | PANDAseq]] || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pango-Sapelo2 | Pango]] || 1.40.3, 1.41.1 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ParaFly-Sapelo|ParaFly]]  || 0.1.0 || [[:Category:utility|utility]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PartitionFinder-Sapelo2|PartitionFinder]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PASA-Sapelo2|PASA]]  || 2.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PASTA-Sapelo|PASTA]]  || 1.6.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PASTA-Sapelo2|PASTA]]  || 1.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Paup-Sapelo|Paup]] || 4a147 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PAUP-Sapelo2|PAUP]]  ||4a162_centos64_intel|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pbh5tools-Sapelo2 | pbh5tools]] || 0.8.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PBLAT-Sapelo2|PBLAT]]  || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PBSuite-Sapelo | PBSuite]] || 15.8.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PBSuite-Sapelo2 | PBSuite]] || 15.8.24 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PCRE-Sapelo2 | PCRE]] || 8.38, 8.39, 8.41 || [[:Category:Library|Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Peakranger-Sapelo|Peakranger]] || 1.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PEAR-Sapelo|PEAR]]  || 0.9.10-src || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PEAR-Sapelo2|PEAR]]  || 0.9.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PePr-Sapelo|PePr]]  || 1.1.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Perl-Sapelo|Perl]] || 5.24.0-thread || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Perl-Sapelo2|Perl]] || 5.20.3, 5.24.0, 5.24.1, 5.26.0, 5.26.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[Perl-Teaching|Perl]]  || 5.26.1, 5.26.0, 5.24.1, 5.24.0, 5.20.3|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PETSc-Sapelo|PETSc]] || 3.7.6 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PETSc-Sapelo2|PETSc]] || 3.8.4 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PGI Compilers-Sapelo|PGI Compilers]] || 2014 || [[:Category:Compiler|Compiler]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PHASE-Sapelo |PHASE]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[phaser-Sapelo |phaser]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhaseTank-Sapelo|PhaseTank]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhaseTank-Sapelo2|PhaseTank]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Phobius-Sapelo2|Phobius]] || 1.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Phred/Phrap/Conced-Sapelo2|Phred/Phrap/Conced]] ||  Phred version: 0.071220.c, Phrap version: 0.990329, Consed version: 29.0 || [[:Category:Bioinformatics|Bioinformatics]] ||  [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PHYLIP-Sapelo2|PHYLIP]] || 3.697 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyloGenie-Sapelo|PhyloGenie]]  ||11082017|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[phyluce-Sapelo2|Phyluce]]  ||1.6.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyML-Sapelo|PhyML]]  ||3.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyML-Sapelo2|PhyML]]  ||3.3.20170530|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyloBayes-MPI-Sapelo |PhyloBayes-MPI]] || 1.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyloBayes-MPI-Sapelo2 |PhyloBayes-MPI]] || 20161021 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyloNet-Sapelo |PhyloNet]] || 3.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[phyluce-Sapelo |phyluce]] || 1.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PhyML-Sapelo|PhyML]]  || 3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[picard-Sapelo |picard]] || 2.1.1, 2.4.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[picard-Sapelo2 |picard]] || 2.16.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[picard-Teaching|Picard]]  || 2.16.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[picrust-Sapelo|picrust]] || 1.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PICRUSt-Sapelo2 | PICRUSt]] || 1.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pigz-Sapelo|pigz]] || 2.3.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pigz-Sapelo2|pigz]] || 2.3.3 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PILER-Sapelo2|PILER]]  ||2.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pilon-Sapelo|Pilon]] || 1.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pilon-Sapelo2|Pilon]] || 1.22 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[pilon-Teaching|Pilon]]  || 1.22|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pindel-Sapelo|Pindel]]  ||0.2.5b8|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pIRS-Sapelo|pIRS]]  || 2.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pitchfork-Sapelo|Pitchfork]]  || 09272017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[platypus-Sapelo|platypus]] || 0.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PLEK-Sapelo|PLEK]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[plink-Sapelo|plink]] || 1.07, 1.9-beta3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PLINK-Sapelo2|PLINK]] || 1.07, 1.9b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PLUMED-Sapelo|PLUMED]] || 2.3.3 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[poretools-Sapelo|poretools]] || 0.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[portaudio-Sapelo|portaudio]] || 19 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PRATT-Sapelo|PRATT]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[prep-chem-src-Sapelo|prep-chem-src]] || 1.5 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Primer3-Sapelo | Primer3]] || 2.0.0-alpha || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Primer3-Sapelo2|Primer3]] || 2.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PRINSEQ-Sapelo|PRINSEQ]] || 0.20.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PRINSEQ-Sapelo2|PRINSEQ]] || 0.20.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ProbABEL-Sapelo|ProbABEL]] || 0.5.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[prodigal-Sapelo|Prodigal]]  ||2.6.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[prodigal-Sapelo2|Prodigal]]  ||2.6.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[proovread-Sapelo | proovread]] || 2.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Prokka-Sapelo|Prokka]] || 1.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Prokka-Sapelo2|Prokka]] || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[proovread-Teaching|Proovread]]  || 2.14.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[protobuf-Sapelo|protobuf]] || 2.4.1, 2.6.1, 3.0.0-beta1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[protobuf-Sapelo2|protobuf]] || 3.3.0, 3.4.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Prottest3-Sapelo|Prottest3]] || 3.4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pybedtools-Sapelo|pybedtools]] || 09/22/2016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pybedtools-Sapelo2|pybedtools]] || 0.7.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pyDNase-Sapelo|pyDNase]] ||0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pydub-Sapelo|pydub]] ||0.21.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pyfasta-Sapelo|pyfasta]] ||0.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PyPy-Sapelo | PyPy]] || 2.7-5.10.0 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PyPy-Sapelo2 | PyPy]] || 6.0.0 (2.7.14) || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[pyRAD-Sapelo|pyRAD]] || 3.0.64 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Pysam-Sapelo2 | Pysam]] || 0.10.0, 0.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| [[Python-Sapelo | Python]] || 2.6.6, 2.7.8, 2.7.13, 3.5.2, 3.6.4 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Python-Sapelo2 | Python]] || 2.7.12, 2.7.14, 3.4.3, 3.5.1 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="P">[[Python-Teaching|Python]]  || 3.6.4, 3.5.2, 2.7.14, 2.7.12|| [[:Category:Programming|Programming]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[PyTorch-Sapelo|PyTorch]] || 0.1.9, 0.1.11 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="Q"></span>[[Qiime-Sapelo|Qiime]] || 1.9.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[QIIME2-Sapelo2|QIIME2]] || 2018.2, 2018.4, 2018.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Quake-Sapelo|Quake]]  ||0.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Qualimap2-Sapelo|Qualimap2]]  || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Qualimap2-Sapelo2|Qualimap2]]  || 2.2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[QUAST-Sapelo|QUAST]] ||4.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[QUAST-Sapelo2|QUAST]] ||4.2, 4.6.1, 4.6.3, 5.0.0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Quantum Espresso-Sapelo|Quantum Espresso]] || 5.4.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Quantum Espresso-Sapelo2|Quantum Espresso]] || 6.2.0 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="R"></span>[[R-Sapelo | R]] || 3.1.2, 3.2.1, 3.2.3, 3.3.1|| [[:Category:Statistics|Statistics]]  || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[R-Sapelo2 | R]] || 3.4.4|| [[:Category:Statistics|Statistics]]  || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[racon-Sapelo |racon]] || 20161214 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[racon-Sapelo2 |racon]] || 20180406 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Randfold-Sapelo|Randfold]]  || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[randfold-Sapelo2|randfold]]  || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RAPSearch2-Sapelo |RAPSearch2]] || 2.23 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RATT-Sapelo|RATT]]  || 10052017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RATT-Sapelo2|RATT]]  || 20180710 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RAxML-Sapelo | RAxML]] || 8.2.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RAxML-Sapelo2 | RAxML]] || 8.2.4, 8.2.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="R">[[RAxML-Teaching|RAxML]]  || 8.2.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Ray-Sapelo | Ray]] || 2.3.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Rcorrector-Sapelo2|Rcorrector]] || 1.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RDPTools-Sapelo|RDPTools]] || 2.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[READemption-Sapelo|READemption]] || 0.3.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RED-Sapelo|RED]] || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Reapr-Sapelo|REAPR]] || 1.0.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Reapr-Sapelo2|REAPR]] || 1.0.18 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RECON-Sapelo2|RECON]] || 1.08 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[REPCLASS-Sapelo|REPCLASS]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[repdenovo-Sapelo|repdenovo]]  || 02232017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RepeatExplorer-Sapelo|RepeatExplorer]] || 02/2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RepeatExplorer-TAREAN-Sapelo|RepeatExplorer-TAREAN]] || 12/13/2016, 01/10/2017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Repeatmasker-Sapelo|Repeatmasker]] || 4.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Repeatmasker-Sapelo2|Repeatmasker]] || 4.0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="R">[[RepeatMasker-Teaching|RepeatMasker]]  || 4.0.7|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Repeatmodeler-Sapelo|Repeatmodeler]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Repeatmodeler-Sapelo2|Repeatmodeler]] || 1.0.11 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="R">[[RepeatModeler-Teaching|RepeatModeler]]  || 1.0.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RepeatScout-Sapelo2|RepeatScout]]  ||1.0.5|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="R">[[RepeatScout-Teaching|RepeatScout]]  || 1.05|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[REPET-Sapelo2|REPET]]  || 2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RepeatScout-Sapelo2|RepeatScout]] || 1.05 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RES-Scanner-Sapelo|RES-Scanner]] || 20170726 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Revbayes-Sapelo|Revbayes]] || 1.0.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RGT-Sapelo|RGT]] || 0.11.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RMBlast-Sapelo2|RMBlast]] || 2.6.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Rmpi-Sapelo|Rmpi]] || 0.6-6 || [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Rmpi-Sapelo2|Rmpi]] || 0.6-6 || [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RNAmmer-Sapelo|RNAmmer]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RNAmmer-Sapelo2|RNAmmer]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RNAple-Sapelo|RNAple]]  ||0.2|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Roary-Sapelo |Roary]] || 3.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Roary-Sapelo2 |Roary]] || 3.12.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Roms_tools-Sapelo |Roms_tools]] || 3.1.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Rosetta-Sapelo |Rosetta]] || 2016.15.58628, 2017.26.59567 || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RSEM-Sapelo |RSEM]] || 1.2.20 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RSEM-Sapelo2 |RSEM]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[RSeQC-Sapelo|RSeQC]] || 2.6.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Ruby-Sapelo|Ruby]]  ||2.4.2|| [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[runBNG-Sapelo2|runBNG]] || 1.03 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S"></span>[[Sabre]] || 02/03/2017 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
|[[Sage-Sapelo|Sage]] || 7.4, 8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Salmon-Sapelo|Salmon]] || 0.6.1-pre || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Salmon-Sapelo2|Salmon]] || 0.8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[sam2pairwise-Sapelo|sam2pairwise]] || 1.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[samtools-Sapelo|samtools]] || 1.3.1 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SAMtools-Sapelo2|SAMtools]] || 0.1.19, 1.3.1, 1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[SAMtools-Teaching|SAMtools]]  || 1.6, 1.3.1, 0.1.19|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SATé-Sapelo|SATé]] || 2.2.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[sbt-Sapelo|sbt]] || 0.13.12, 1.0.2 || [[:Category:Other|Other]], [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[sbt-Sapelo2|sbt]] || 1.1.1 || [[:Category:Other|Other]], [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[scala-Sapelo|scala]] || 2.10.6, 2.11.7, 2.12.0-RC1, 2.12.1 || [[:Category:Other|Other]], [[:Category:Programming|Programming]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[scala-Sapelo2|scala]] || 2.12.4 || [[:Category:Other|Other]], [[:Category:Programming|Programming]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ScaLAPACK-Sapelo|ScaLAPACK]] || 2.0.2 || [[:Category:Math_Library|Math Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[scalpel-Sapelo|scalpel]] || 0.5.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Scripture-Sapelo| Scripture ]] || 3/20/2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Seq-Gen-Sapelo|Seq-Gen]] || 1.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[seqtk-Sapelo|seqtk]] || 1.0-r63-dirty || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[seqtk-Sapelo2|seqtk]] || 1.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SGA-Sapelo|SGA]] ||0.10.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[shapeit-Sapelo|shapeit]] || v2.r837 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SHORE-Sapelo|SHORE]] || 0.9.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ShortStack-Sapelo|ShortStack]] || 3.8.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[sicer-Sapelo|sicer]] || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[sickle-Sapelo|sickle]] || 1.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SignalP-Sapelo2|SignalP]] || 4.1f || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Silix-Sapelo2|Silix]] || 1.2.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SInC-simulator-Sapelo|SInC-simulator]] || 2017.06.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SINE_Scan-Sapelo|SINE_Scan]] || 1.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[slda-Sapelo|slda]] || 0.1.4 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[smoke-Sapelo2|smoke]] || 4.5 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SMRTanalysis-Sapelo|SMRTanalysis]]  || 3.0.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SMRTLINK-Sapelo2|SMRTLINK]]  ||5.1.0.26412|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[SMRTLINK-Teaching|SMRTLINK]]  || 5.1.0.26412, 5.0.1.9585|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[snakemake-Sapelo|snakemake]] || 4.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SNAP-Zoe-Sapelo2|SNAP-Zoe]] || 20060728 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[SNAP-Zoe-Teaching|SNAP-Zoe]]  || 20060728|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Sniffles-Sapelo2|Sniffles]] || 1.0.8 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SNP-ML-Sapelo2|SNP-ML]] || 1.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[snpEff-Sapelo2|snpEff]] || 4.3t || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[snpEff-Teaching|SnpEff]]  || 4.3t|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SNPhylo-Sapelo|SNPhylo]] || 20160204 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SNPhylo-Sapelo2|SNPhylo]] || 20160204 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SOAPaligner-Sapelo | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SOAPaligner-Sapelo2 | SOAPaligner]] || 2.21 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SOAPdenovo2-Sapelo|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SOAPdenovo2-Sapelo2|SOAPdenovo2]] || r240 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[SOAPdenovo2-Teaching|SOAPdenovo2]]  || r240|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SOP-GPU-Sapelo2|SOP-GPU]] || 20180404 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SortMeRNA-Sapelo|SortMeRNA]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SortMeRNA-Sapelo2|SortMeRNA]] || 2.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[SPAdes-Teaching|SPAdes]]  || 3.11.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Spark-Sapelo|Spark]] || 1.6.0, 2.0.1, 2.2.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SPAdes-Sapelo2|SPAdes]] || 3.11.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SPAdes-Sapelo|SPAdes]] || 3.7.0, 3.8.0, 3.9.0, 3.10.0, 3.11.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SpeedSeq-Sapelo|SpeedSeq]] || 052317 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SQUID-Sapelo|SQUID]]  || 1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SRAToolKit-Sapelo |SRAToolKit ]] || 2.8.2-1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SRAToolKit-Sapelo2 |SRAToolKit ]] || 2.8.2-1, 2.9.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SSPACE-Sapelo|SSPACE]]  ||2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SSPACE-Sapelo2|SSPACE]]  ||2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[stacks-Sapelo|stacks]] || 1.40, 1.44, 2.0beta2, 2.0beta7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Stacks-Sapelo2|Stacks]] || 1.48 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[Stacks-Teaching|Stacks]]  || 2.0, 1.48|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[STAMP-Sapelo | STAMP]] || 2.1.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[STAMPY-Sapelo | STAMPY]] || 1.0.31 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[STAR-Sapelo|STAR]] || 2.5.3a || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[STAR-Sapelo2|STAR]] || 2.5.3a, 2.6.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="S">[[STAR-Teaching|STAR]]  || 2.6.0c, 2.5.3a|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[StringTie-Sapelo|StringTie]] || 1.2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[StringTie-Sapelo2|StringTie]] || 1.3.3 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[structure-Sapelo|structure]] || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Structure-Sapelo2|Structure]]  || 2.3.4 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[subread-Sapelo|subread]] || 1.5.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Subread-Sapelo2|Subread]] || 1.6.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SUNTANS-Sapelo|SUNTANS]] || 20150923 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SUNTANS-Sapelo2|SUNTANS]] || 20180305 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Supernova-Sapelo2|Supernova]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SUPPA-Sapelo|SUPPA]] || 06122015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SVDetect-Sapelo|SVDetect]] || 0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SVDetect-Sapelo2|SVDetect]] || 0.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SVMlight-Sapelo|SVMlight]] || 6.02 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SWIG-Sapelo|SWIG]]  ||3.0.12|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[SWIG-Sapelo2|SWIG]]  ||3.0.12|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="T"></span>[[T-Coffee-Sapelo|T-Coffee]]  || 11.00.8cbe486 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[T-REX-Sapelo|T-REX]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TRF-Sapelo|Tandem Repeats Finder]] || 4.09 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[tassel-Sapelo|tassel]] || 5.2.42 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TASSEL-Sapelo2|TASSEL]] || 5.2.44 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Tbl2asn-Sapelo2|Tbl2asn]] || 04172018 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TensorFlow-Sapelo2|TensorFlow]] || 1.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TensorFlow-models-Sapelo2|TensorFlow-models]] || 20180620 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TEPID-Sapelo|TEPID]] || 0.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[tesseract-Sapelo|tesseract]] || 3.04.01 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Theano-Sapelo|Theano]] || 0.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TIGRA-Sapelo|TIGRA]] || 0.4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TMHMM-Sapelo2|TMHMM]] || 2.0c || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[cDNA_Cupcake-Sapelo|TOFU2]]  || 3.9 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[tophat-Sapelo|tophat]] || 2.0.14 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Tophat-Sapelo2|Tophat]] || 2.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="T">[[TopHat-Teaching|TopHat]]  || 2.1.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TPP-Sapelo2|TPP]] || 5.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TransDecoder-Sapelo|TransDecoder]] || 2.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TransDecoder-Sapelo2|TransDecoder]] || 2.1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Transposome-Sapelo|Transposome]] || 0.09.7 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TransposonPSI-Sapelo|TransposonPSI]] || 08222010 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Transrate-Sapelo|Transrate]] || 1.0.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TreeMix-Sapelo|TreeMix]]  || 1.13 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TrimGalore-Sapelo|TrimGalore]]  ||0.4.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[trimmomatic-Sapelo|trimmomatic]] ||0.36|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trimmomatic-Sapelo2|Trimmomatic]] ||0.36|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[TrimGalore-Sapelo|TrimGalore]] || 4.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trim_Galore-Sapelo2|Trim_Galore]] || 0.4.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trinity-Sapelo|Trinity]] || 2.06 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trinity-Sapelo2|Trinity]] || r20140717, 2.5.1, 2.6.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="T">[[Trinity-Teaching|Trinity]]  || 2.6.6|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trinotate-Sapelo|Trinotate]]  || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Trinotate-Sapelo2|Trinotate]]  || 3.1.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[tRNAscan-SE-Sapelo|TRNAscan-SE]]  || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[tRNAscan-SE-Sapelo2|TRNAscan-SE]]  || 2.0.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="U"></span> [[UCHIME-Sapelo|UCHIME]]  || 4.2.40 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[usearch-Sapelo|usearch]] ||10.0.240|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[UCSC-Sapelo|UCSC]] || 06-17-2015 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ucsc-Sapelo2|ucsc]] || 359 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[UPP-Sapelo2|UPP]] || 3.2 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="V"></span>[[VarScan-Sapelo2|VarScan]] || 2.4.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[VCF-kit-Sapelo2|VCF-kit]]  || 0.1.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Vcflib-Sapelo|vcflib]]  || 1.0.0-rc1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[vcflib-Sapelo2|vcflib]]  || 20180410 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[vcftools-Sapelo|vcftools]] || 0.1.12b || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[VCFtools-Sapelo2|VCFtools]] || 0.1.15 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[vcf2diploid-Sapelo2|vcf2diploid]] || 0.2.6a || [[:Category:Chemistry|Chemistry]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[vcf2phylip-Sapelo2|vcf2phylip]]  || 1.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="V">[[VCFtools-Teaching|VCFtools]]  || 0.1.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[velvet-Sapelo|velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Velvet-Sapelo2|Velvet]] || 1.2.10 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
|-
| <span id="V">[[Velvet-Teaching|Velvet]]  || 1.2.10|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ViennaRNA-Sapelo|ViennaRNA]]  ||2.1.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[ViennaRNA-Sapelo2|ViennaRNA]]  ||2.4.3, 2.4.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Viromescan-Sapelo|viromescan]]  || 05292017 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[Vmatch-Sapelo2|Vmatch]] || 2.3.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[voxnet-Sapelo|voxnet]] || 0.1 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[vsearch-Sapelo|vsearch]] || 1.10.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[VSEARCH-Sapelo2|VSEARCH]]  || 2.8.1 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="W"></span> [[wgs-Sapelo|wgs]] || 8.2 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[whatshap-Sapelo|whatshap]] || 0.12 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WinHap-Sapelo|WinHap]] || 2.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WPS-Sapelo|WPS]] || 3.6, 3.6.1, 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WPS-Sapelo2|WPS]] || 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WRF-Sapelo|WRF]] || 3.6, 3.6.1, 3.7, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WRF-Sapelo2|WRF]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WRF-Chem-Sapelo|WRF-Chem]] || 3.6.1, 3.8 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WRF-Chem-Sapelo2|WRF-Chem]] || 3.6.1, 3.8.0 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WRF-Fire-Sapelo2|WRF-Fire]] || 20170221 || [[:Category:Other|Other]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WU Blast-Sapelo|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[WU Blast-Sapelo2|WU Blast]] || 2.2.6 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="X"></span> [[RDPTools-Sapelo|Xander_assembler]] || 7/12/2016 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[xforms-Sapelo2|xforms]] || 1.2.4 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| <span id="Y"> </span>[[YAHA-Sapelo|YAHA]]  || 0.1.83 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[YASRA-Sapelo|YASRA]]  || 2.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
|-
| [[YASRA-Sapelo2|YASRA]]  || 2.33 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo2|Sapelo2]] || [[File:Up20.png|20px|link=#top]]
|-
| [[yt-Sapelo|yt]] || 3.2.3 || [[:Category:Other|Other]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]  
| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]  
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| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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[[#top|Back To Top]] [[File:Up20.png|20px|link=#top]]
[[#top|Back To Top]] [[File:Up20.png|20px|link=#top]]
[[Category:Sapelo2]][[Category:Sapelo]][[Category:Teaching]][[Category:Software]]

Revision as of 10:02, 13 August 2018

Below is a partial list of software packages installed on Sapelo, Sapelo2, Teaching (we are in the process of adding wiki pages for more applications). To view a list of all modules installed on Sapelo2/Teaching, along with a short description, please run the following command on Sapelo2/Teaching: 

module spider

You can also use the command above to search for a specific application. For more information, please see Lmod.

Installed Software List

Last updated 2018-08-13. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name Version Category Cluster
4p 1.0 Bioinformatics Sapelo Up20.png
4p 1.0 Bioinformatics Sapelo2 Up20.png
ABySS 2.0.2 Bioinformatics Sapelo Up20.png
ABySS 1.9.0, 2.0.2, 2.1.0 Bioinformatics Sapelo2 Up20.png
bcl2fastq 2.17.1.14 Bioinformatics Sapelo Up20.png
Zbar 0.10 Graphics Sapelo Up20.png
zlib 1.2.5, 1.2.8 Library Sapelo Up20.png

Back To Top Up20.png

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