Software2: Difference between revisions

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| [[BCFtools-Teaching|BCFtools]]  || 1.8 , 1.6, 1.3.1, 1.8, 1.6, 1.3.1|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Biopython-Teaching|Biopython]]  || 1.68 , 1.68, 1.68, 1.68|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Bowtie2-Teaching|Bowtie2]]  || 2.3.4.1 , 2.3.3, 2.2.3, 2.3.4.1, 2.3.3, 2.2.3|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[BWA-Teaching|BWA]]  || 0.7.17 , 0.7.15, 0.7.17, 0.7.15|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[canu-Teaching|Canu]]  || 1.7 , 1.6, 1.5, 1.4, 1.7, 1.6, 1.5, 1.4|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[GATK-Teaching|GATK]]  || 3.8-0 , 3.4-0, 3.8-0, 3.4-0|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Java-Teaching|Java]]  || 1.8.0_144 , 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92, 1.8.0_144, 1.8.0_141, 1.8.0_121, 1.8.0_112, 1.8.0_92|| [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[MAFFT-Teaching|MAFFT]]  || 7.313 , 7.273, 7.130, 7.313, 7.273, 7.130|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Perl-Teaching|Perl]]  || 5.26.1 , 5.26.1, 5.26.0, 5.24.1, 5.24.0, 5.20.3, 5.26.1, 5.26.1, 5.26.0, 5.24.1, 5.24.0, 5.20.3|| [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Python-Teaching|Python]]  || 3.6.4 , 3.5.2, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.12, 3.6.4, 3.5.2, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.14, 2.7.12|| [[:Category:Other|Other]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[RAxML-Teaching|RAxML]]  || 8.2.11 , 8.2.11, 8.2.11, 8.2.11|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[SAMtools-Teaching|SAMtools]]  || 1.6 , 1.3.1, 1.3.1, 0.1.19, 1.6, 1.3.1, 1.3.1, 0.1.19|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[Stacks-Teaching|Stacks]]  || 2.0 , 1.48, 2.0, 1.48|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| [[STAR-Teaching|STAR]]  || 2.6.0c , 2.5.3a, 2.6.0c, 2.5.3a|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="S"></span>[[SWIG]] || 3.0.2 || [[:Category:Programming|Programming]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]]
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| <span id="T"></span>[[T-Coffee-Sapelo|T-Coffee]]  ||11.00.8cbe486|| [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[T-REX-Sapelo|T-REX]]  || 1.0 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[tabix]] || 0.2.5 || [[:Category:Bioinformatics|Bioinformatics]] || [[:Category:Zcluster|Zcluster]] || [[File:Up20.png|20px|link=#top]]
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| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]  
| [[-Teaching|-Teaching]]  ||  || [[:Category:|Category:]] || [[:Category:Teaching|Teaching]] || [[File:Up20.png|20px|link=#top]]
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| <span id="Z"></span>[[Zbar-Sapelo|Zbar]] || 0.10 || [[:Category:Graphics|Graphics]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
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| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]
| [[zlib-Sapelo|zlib]] || 1.2.5, 1.2.8 || [[:Category:Library|Library]] || [[:Category:Sapelo|Sapelo]] || [[File:Up20.png|20px|link=#top]]

Revision as of 11:51, 9 August 2018

Installed Software List

Last updated 2018-08-09. Note: Click on the icons to the right of the column headings to sort the table. 0-9 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Name Version Category Cluster
-Teaching [[:Category:|Category:]] Teaching Up20.png
Zbar 0.10 Graphics Sapelo Up20.png
zlib 1.2.5, 1.2.8 Library Sapelo Up20.png
Zorro 2.2 Bioinformatics Zcluster Up20.png

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