Shtsai: /* Running Program */

2019-01-18T18:57:55Z

Running Program

← Older revision		Revision as of 14:57, 18 January 2019
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	<nowiki>#</nowiki>SBATCH --mem=<u>10gb</u><br>		<nowiki>#</nowiki>SBATCH --mem=<u>10gb</u><br>
	<nowiki>#</nowiki>SBATCH --time=<u>08:00:00</u><br>		<nowiki>#</nowiki>SBATCH --time=<u>08:00:00</u><br>
	<nowiki>#</nowiki>SBATCH --output=wpsjob.%j.out<br>		<nowiki>#</nowiki>SBATCH --output=<u>wpsjob</u>.%j.out<br>
	<nowiki>#</nowiki>SBATCH --error=wpsjob.%j.err<br>		<nowiki>#</nowiki>SBATCH --error=<u>wpsjob</u>.%j.err<br>

	cd $SLURM_SUBMIT_DIR<br>		cd $SLURM_SUBMIT_DIR<br>

Shtsai: Created page with "Category:TeachingCategory:SoftwareCategory:Other === Category === Other === Program On === Teaching === Version === 3.8 === Author / Distributor === Pl..."

2019-01-18T18:57:07Z

Created page with "Category:Teaching Category:Software Category:Other === Category === Other === Program On === Teaching === Version === 3.8 === Author / Distributor === Pl..."

New page

[[Category:Teaching]][[Category:Software]][[Category:Other]]
=== Category ===

Other

=== Program On ===

Teaching

=== Version ===

3.8

=== Author / Distributor ===

Please see http://wrf-model.org
=== Description ===

WPS is the Weather Research and Forecasting (WRF) pre-processing system. For more information, please see http://wrf-model.org
=== Running Program ===

Also refer to [[Running Jobs on the teaching cluster]] and to the documentation about our installation of [[WRF-Teaching|WRF]].

Version 3.8: compiled with GNU 5.4.0 compilers, using MPI libraries (OpenMPI 1.10.3), NetCDF 4.1.3 (with netcdf-4 enabled), HDF5 1.8.7, and JasPer 1.900.1.

Before invoking any of the WPS binaries, please load the WPS/3.8.0-foss-2016b-dmpar module with the following command:
<pre class="gcommand">
ml WPS/3.8.0-foss-2016b-dmpar
</pre>
This module will load all other modules that it depends on.

After loading this module, the WPS executables geogrid.exe, metgrid.exe, and ungrib.exe will be available in your path, as well as other utilities such as link_grib.csh.

Example of a shell script sub.sh to run geogrid.exe v. 3.8 at the batch queue:

<div class="gscript2">
<nowiki>#</nowiki>!/bin/bash 
<nowiki>#</nowiki>SBATCH --job-name=wpsjob 
<nowiki>#</nowiki>SBATCH --partition=batch 
<nowiki>#</nowiki>SBATCH --mail-type=ALL 
<nowiki>#</nowiki>SBATCH --mail-user=username@uga.edu 
<nowiki>#</nowiki>SBATCH --ntasks=4 
<nowiki>#</nowiki>SBATCH --mem=10gb 
<nowiki>#</nowiki>SBATCH --time=08:00:00 
<nowiki>#</nowiki>SBATCH --output=wpsjob.%j.out 
<nowiki>#</nowiki>SBATCH --error=wpsjob.%j.err 

cd $SLURM_SUBMIT_DIR 
ml WPS/3.8.0-foss-2016b-dmpar 
mpirun geogrid.exe [options] 
</div>
In the real submission script, at least all the above underlined values need to be reviewed or to be replaced by the proper values.

'''Sample job submission command:'''

<pre class="gcommand">
sbatch sub.sh
</pre>

=== Documentation ===

Please see http://wrf-model.org

=== Installation ===

Source code downloaded from http://www2.mmm.ucar.edu/wrf/src.

The geography data is available in /usr/local/apps/eb/WRF/geog/

=== System ===
64-bit Linux

WPS-Teaching - Revision history

Shtsai: /* Running Program */

Shtsai: Created page with "Category:TeachingCategory:SoftwareCategory:Other === Category === Other === Program On === Teaching === Version === 3.8 === Author / Distributor === Pl..."