Monitoring Jobs on Sapelo2 - Revision history

Shtsai at 16:54, 23 July 2024

2024-07-23T16:54:28Z

← Older revision		Revision as of 12:54, 23 July 2024
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	* See information about a particular job: <code>sacct-gacrc -j JOBID</code> (replacing JOBID with a particular job ID)		* See information about a particular job: <code>sacct-gacrc -j JOBID</code> (replacing JOBID with a particular job ID)
	* See information about all of your jobs that started from midnight up to now in the highmem_p: <code>sacct-gacrc -r highmem_p</code>		* See information about all of your jobs that started from midnight up to now in the highmem_p: <code>sacct-gacrc -r highmem_p</code>
	* See information about your jobs that from a particular date up to now: <code>sacct-gacrc -S YYYY-MM-DD</code> (replacing YYYY-MM-DD with a date, e.g. 2021-09-01)		* See information about your jobs that ran from a particular date up to now: <code>sacct-gacrc -S YYYY-MM-DD</code> (replacing YYYY-MM-DD with a date, e.g. 2021-09-01)


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	...		...
	</pre>		</pre>
			Please note that <code>sacct</code> and <code>sacct-gacrc</code> also show jobs in a RUNNING state.

	----		----

Ben at 17:33, 21 September 2021

2021-09-21T17:33:00Z

← Older revision		Revision as of 13:33, 21 September 2021
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	-r, --partition Display information about jobs from a particular partition		-r, --partition Display information about jobs from a particular partition
	-S, --starttime Display information about jobs starting from a date in the format of yyyy-mm-dd (default: Midnight of today)		-S, --starttime Display information about jobs starting from a date in the format of yyyy-mm-dd (default: Midnight of today)
			-T Display the end time of a particular job or jobs
	-u, --user Display information about a particular user's job(s) (default: current user)		-u, --user Display information about a particular user's job(s) (default: current user)
	-X, --allocations Only show one line per job (do not display job steps)		-X, --allocations Only show one line per job (do not display job steps)

Ben at 16:27, 17 September 2021

2021-09-17T16:27:00Z

Show changes

Shtsai at 02:56, 29 October 2020

2020-10-29T02:56:07Z

@@ Line 207: / Line 207: @@
 .batch       batch                                c4-23          1        1          1        2Gn  12392148K  COMPLETED   00:04:23   00:04:23                 0:0
 .extern     extern                                c4-23          1        1          1        2Gn    142616K  COMPLETED   00:04:23   00:04:23                 0:0
 </pre>

Shtsai: Shtsai moved page Monitoring Jobs on Sap2test to Monitoring Jobs on Sapelo2 without leaving a redirect

2020-10-26T17:57:11Z

Shtsai moved page Monitoring Jobs on Sap2test to Monitoring Jobs on Sapelo2 without leaving a redirect

← Older revision	Revision as of 13:57, 26 October 2020
(No difference)

Ben at 12:26, 26 October 2020

2020-10-26T12:26:43Z

← Older revision		Revision as of 08:26, 26 October 2020
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	[[Category:Sapelo2]]		[[Category:Sapelo2]]


	===How to list all user jobs in the queues===		===How to list all user jobs in the queues===

Ben at 12:26, 26 October 2020

2020-10-26T12:26:18Z

← Older revision		Revision as of 08:26, 26 October 2020
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	[[Category:Sapelo2]]		[[Category:Sapelo2]]

	~~<span style="color:black">~~
	~~'''This page is being written in preparation for switching the queueing system on Sapelo2 to Slurm, it is not applicable to Sapelo2 yet.'''~~
	~~</span>~~

	~~<span style="color:black">~~
	~~'''This page is applicable to the Slurm development cluster (Sap2test)'''~~
	~~</span>~~


	~~<pre class="gcomment">~~
	We expect all current users to spend some time getting familiar with the new environment so as to reduce the amount of support queries after the switchover. Once Sapelo2 migrates to Slurm and the new cluster environment, job submission scripts and workflows based on Torque/Moab and the current software packages installed on Sapelo2 will not work anymore.
	~~</pre>~~

Shtsai: /* How to see detailed information about a given job */

2020-09-22T17:17:07Z

How to see detailed information about a given job

← Older revision		Revision as of 13:17, 22 September 2020
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	'''For jobs that already completed:'''		'''For jobs that already completed:'''

	Besides <code>sacct</code> and <code>sacct-gacrc</code> described above, you can use the <code>seff</code> followed by the job id. Sample output of the <code>seff ~~35487~~</code> command, where 35490 is a sample jobid:		Besides <code>sacct</code> and <code>sacct-gacrc</code> described above, you can use the <code>seff</code> followed by the job id. Sample output of the <code>seff 35490</code> command, where 35490 is a sample jobid:
	<pre class="gcomment">		<pre class="gcomment">
	Job ID: 35490		Job ID: 35490

Shtsai at 17:14, 22 September 2020

2020-09-22T17:14:05Z

← Older revision		Revision as of 13:14, 22 September 2020
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	'''For jobs that already completed:'''		'''For jobs that already completed:'''

	Besides <code>sacct</code> and <code>sacct-gacrc</code> described above, you can use the <code>seff</code> followed by the job id. Sample output of the <code>seff 35487</code> command, where ~~35487~~ is a sample jobid:		Besides <code>sacct</code> and <code>sacct-gacrc</code> described above, you can use the <code>seff</code> followed by the job id. Sample output of the <code>seff 35487</code> command, where 35490 is a sample jobid:
	<pre class="gcomment">		<pre class="gcomment">
	Job ID: ~~35487~~		Job ID: 35490
	Cluster: tc2		Cluster: tc2
	User/Group: jsmith/abclab		User/Group: jsmith/abclab
	State: COMPLETED (exit code 0)		State: COMPLETED (exit code 0)
	~~Nodes~~: 1		Cores: 1
	~~Cores per node: 2~~		CPU Utilized: 00:04:21
	CPU Utilized: 00:04:22		CPU Efficiency: 99.24% of 00:04:23 core-walltime
	CPU Efficiency: 49.81% of 00:08:46 core-walltime
	Job Wall-clock time: 00:04:23		Job Wall-clock time: 00:04:23
	Memory Utilized: ~~554~~.54 MB		Memory Utilized: 551.61 MB
	Memory Efficiency: 27.08% of 2.00 GB		Memory Efficiency: 26.93% of 2.00 GB
	</pre>		</pre>

	For this same job, sacct-gacrc shows:		For this same job, sacct-gacrc shows:
	<pre class="gcomment">		<pre class="gcomment">
	JobID JobName User Partition NodeList AllocNodes NTasks NCPUS ReqMem MaxVMSize State CPUTime Elapsed Timelimit ExitCode WorkDir		JobID JobName User Partition NodeList AllocNodes NTasks NCPUS ReqMem MaxVMSize State CPUTime Elapsed Timelimit ExitCode WorkDir
	------------ ---------- --------- ---------- --------------- ---------- -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------- --------------------		------------ ---------- --------- ---------- --------------- ---------- -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------- --------------------
	~~35487~~ amber shtsai gpu_p c4-23 1 2 2Gn COMPLETED 00:08:46 00:04:23 01:00:00 0:0 /home/shtsai/sapslu+		35490 amber shtsai gpu_p c4-23 1 1 2Gn COMPLETED 00:04:23 00:04:23 01:00:00 0:0 /home/shtsai/sapslu+
	~~35487~~.batch batch c4-23 1 1 2 2Gn ~~12392116K~~ COMPLETED 00:08:46 00:04:23 0:0		35490.batch batch c4-23 1 1 1 2Gn 12392148K COMPLETED 00:04:23 00:04:23 0:0
	~~35487~~.extern extern c4-23 1 1 2 2Gn 142616K COMPLETED 00:08:46 00:04:23 0:0		35490.extern extern c4-23 1 1 1 2Gn 142616K COMPLETED 00:04:23 00:04:23 0:0
	</pre>		</pre>

Shtsai at 16:50, 22 September 2020

2020-09-22T16:50:16Z

@@ Line 119: / Line 119: @@
 ===How to see detailed information about a given job===
 To see a long listing with detailed information for a running job (STATE = R), including the initial working directory, the number of cores and memory requested, the job submission and start time, use the command
@@ Line 161: / Line 163: @@
 Note that the long listing above does not include the resources utilized by the job.
 For your own jobs that are still running or that already completed, you can check how much memory was used, how much CPU time was used, the working directory, etc, please use the command
@@ Line 195: / Line 199: @@
 ----