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File:GACRC virtual environments training v1.2.pdf

Chelsea — Wed, 24 Jun 2026 12:47:09 GMT

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Chelsea — Wed, 24 Jun 2026 12:46:49 GMT

New page

Chelsea — Tue, 23 Jun 2026 13:37:16 GMT

Version

← Older revision		Revision as of 09:37, 23 June 2026
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	== Version ==		== Version ==

	1.2.1		1.2.1, 1.7.0

	== Author / Distributor ==		== Author / Distributor ==
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	* Version 1.2.1 is installed in the xfer nodes (not on the Sapelo2 login, qlogin, or compute nodes) in /usr/local/bin, a directory that is on user's default path. To use this program, first ssh into xfer.gacrc.uga.edu and you can access the command there.		* Version 1.2.1 is installed in the xfer nodes (not on the Sapelo2 login, qlogin, or compute nodes) in /usr/local/bin, a directory that is on user's default path. To use this program, first ssh into xfer.gacrc.uga.edu and you can access the command there.
			* Version 1.7.0 is installed as a software module that can be loaded with 'ml BaseSpace-CLI/1.7.0'

	== Documentation ==		== Documentation ==

Chelsea — Tue, 23 Jun 2026 13:36:32 GMT

Partial List of Installed Software

← Older revision		Revision as of 09:36, 23 June 2026
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	<!-- \| [[Barrnap-Sapelo2\|Barrnap]] \|\| 0.9 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		<!-- \| [[Barrnap-Sapelo2\|Barrnap]] \|\| 0.9 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|- -->		\|- -->
	\| [[basespace-cli-Sapelo2\|basespace-cli]] \|\| 1.2.1 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		\| [[basespace-cli-Sapelo2\|basespace-cli]] \|\| 1.2.1, 1.7.0 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|- -->		\|- -->
	<!-- \| [[Basset-Sapelo2\|Basset]] \|\| 20200107 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		<!-- \| [[Basset-Sapelo2\|Basset]] \|\| 20200107 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]

Chelsea — Tue, 23 Jun 2026 12:11:38 GMT

Chelsea — Tue, 23 Jun 2026 12:11:30 GMT

Version

Chelsea — Tue, 23 Jun 2026 12:11:16 GMT

Partial List of Installed Software

← Older revision		Revision as of 08:11, 23 June 2026
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	<!-- \| [[CythonGSL-Sapelo2\|CythonGSL]] \|\| 0.2.2 \|\| [[:Category:Other\|Other]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		<!-- \| [[CythonGSL-Sapelo2\|CythonGSL]] \|\| 0.2.2 \|\| [[:Category:Other\|Other]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|- -->		\|- -->
	\| [[Cytoscape-Sapelo2\|Cytoscape]] \|\| 3.9.1 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		\| [[Cytoscape-Sapelo2\|Cytoscape]] \|\| 3.9.1, 3.10.4 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|- -->		\|- -->
	\| [[Cytoscape-Teaching\|Cytoscape]] \|\| 3.9.1 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Teaching]] \|\| [[File:Up20.png\|20px\|link=#top]]		\| [[Cytoscape-Teaching\|Cytoscape]] \|\| 3.9.1, 3.10.4 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Teaching]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|-		\|-
	<!-- \| <span id ="D"></span> [[Dadi-Sapelo2\|Dadi]] \|\| 1.7.0, 2.0.2 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		<!-- \| <span id ="D"></span> [[Dadi-Sapelo2\|Dadi]] \|\| 1.7.0, 2.0.2 \|\| [[:Category:Bioinformatics\|Bioinformatics]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]

Chelsea — Tue, 23 Jun 2026 12:10:37 GMT

Program On

Chelsea — Tue, 23 Jun 2026 12:10:27 GMT

Partial List of Installed Software

← Older revision		Revision as of 08:10, 23 June 2026
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	\| [[Cromwell-Sapelo2\|Cromwell]] \|\| 56 \|\| [[:Category:Tools\|Tools]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		\| [[Cromwell-Sapelo2\|Cromwell]] \|\| 56 \|\| [[:Category:Tools\|Tools]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|-		\|-
	\|[[CUDA-Sapelo2\|CUDA]] \|\| 11.7.0, 11.8.0, 12.1.1, 12.4.0, 12.6.0, 12.8.0 \|\|[[:Category:Programming\|Programming]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		\|[[CUDA-Sapelo2\|CUDA]] \|\| 11.7.0, 11.8.0, 12.1.1, 12.4.0, 12.6.0, 12.8.0, 13.1.0 \|\|[[:Category:Programming\|Programming]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]
	\|-		\|-
	<!-- \| [[cuDNN-Sapelo2\|cuDNN]] \|\| 7.0.4, 7.2.1.38, 7.4.2.24 \|\| [[:Category:Programming\|Programming]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]		<!-- \| [[cuDNN-Sapelo2\|cuDNN]] \|\| 7.0.4, 7.2.1.38, 7.4.2.24 \|\| [[:Category:Programming\|Programming]] \|\| [[:Category:Sapelo2\|Sapelo2]] \|\| [[File:Up20.png\|20px\|link=#top]]